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Publications
and Patents
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Shirley
S. Daube, Dan Bracha, Amnon Buxboim and Roy H. Bar-Ziv
"Compartmentalization by Directional Gene Expression"
Proc.
Natl. Acad. Sci. USA, 107, 7 (2010) p2836-2841
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Maya
Bar and Roy H. Bar-Ziv
"Spatially Resolved DNA Brushes on a Chip: Gene
Activation by Enzymatic Cascade"
Nano
Lett.,
2009, 9 (12), pp
4462–4466
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Tsevi
Beatus, Tsvi Tlusty and Roy Bar-Ziv
"Burgers Shock Waves and Sound in a 2D Microfluidic
Droplets Ensemble"
Physical
Review Letters, 103, 114502 (2009).
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Amnon Buxboim, Erez
Geron, Ronen Alon and Roy Bar-Ziv,
"A Biochip Model of Lymphocyte Locomotion on Confined
Chemokine Tracks"
Small,
5, 15, 1723-1726 (2009)
Small,
5, 15 (2009) -
Frontpiece
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Amnon Buxboim, Shirley
S. Daube and Roy Bar-Ziv,
"Ultradense Synthetic Gene Brushes on a Chip"
Nano
Lett., 2009, 9
(2), pp 909–913.
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Tsevi Beatus, Roy Bar-Ziv
and Tsvi
Tlusty,
"One-Dimensional Microfluidic Crystal Far from
Equilibrium"
Progress of
Theoretical Physics, Supplement No. 175 (2008) pp. 123-130.
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Amnon Buxboim, Shirley S
Daube and Roy Bar-Ziv,
"Synthetic Gene Brushes: a Structure–Function
Relationship"
Molecular Systems Biology 4, Article 181 (2008).
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Roy Bar-Ziv,
"DNA Circuits Get Up to Speed."
Science, 318, no. 5853 pp. 1078-1079 (2007).
This is a perspective on the work of Zhang, Turberfield, Yurke and
Winfree, published
here.
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Tsevi Beatus, Roy Bar-Ziv
and Tsvi
Tlusty,
"Anomalous Microfluidic Phonons Induced by the Interplay of
Hydrodynamic Screening and Incompressibility."
Physical Review Letters, 99, 124502 (2007).
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Lior Nissim, Tsevi
Beatus and Roy Bar-Ziv,
"An autonomous system for identifying and governing a cell's state
in yeast."
Physical
Biology, 4, 154-163 (2007).
This paper is free online at the
IOP
Select website.
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Shirley S. Daube, Talmon
Arad and Roy Bar-Ziv,
"Cell-free co-synthesis of protein nanoassemblies: Tubes, rings,
and doughnuts."
Nano Letters, 7 (3), 638-641 (2007).
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Amnon Buxboim, Maya Bar-Dagan,
Veronica Frydman, David Zbaida, Margherita Morpurgo and Roy Bar-Ziv,
"A single-step photolithographic interface for cell-free gene
expression and active biochips."
Small, 3 (3), 500-510 (2007)
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Tsevi Beatus, Tsvi
Tlusty and Roy Bar-Ziv,
"Phonons in a one-dimensional microfuildic crystal."
Nature Physics, 2, 743-748 (2006).
You can also find this paper at the
UPenn soft matter journal club.
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Maya Bar, Roy Bar-Ziv,
Tali Scherf and Deborah Fass,
"EYcient production of a folded and functional, highly
disulfide-bonded β-helix antifreeze protein in bacteria."
Science Direct, Protein Expression and Purification, 48,
2, 243-252, (2006).
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V. Noireaux, R. Bar-Ziv,
J. Godefroy, H. Salman and A. Libchaber,
"Toward an artificial cell based on gene expression in vesicles."
Physical
Biology, 2, P1-P8 (2005).
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T. Tlusty, R. Bar-Ziv
and A. Libchaber,
"High-fidelity DNA sensing by protein binding fluctuations."
Phys. Rev. Lett., 93, 258103 (2004).
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V. Noireaux, R. Bar-Ziv
and A. Libchaber,
"Principles of cell-free genetic circuit assembly."
Proc.
Natl. Acad. Sci. USA, 100, 12672-12677, (2003).
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R. Bar-Ziv, T. Tlusty,
and A. Libchaber,
"Protein-DNA computation by stochastic assembly cascade."
Proc. Natl.
Acad. Sci. USA, 99, 11589-11592, (2002).
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R. Bar-Ziv and A.
Libchaber,
"Effects of DNA sequence and structure on binding of RecA to
single-stranded DNA."
Proc. Natl.
Acad. Sci. USA, 98, 9068, (2001).
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R. Bar-Ziv, T. Tlusty, E.
Moses, S. A. Safran, A. Bershadsky,
"Pearling in cells: A clue to understanding cell shape."
Proc. Natl.
Acad. Sci. USA, 96, 10140 (1999).
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T. Tlusty, A. Meller and
R. Bar-Ziv,
"Optical forces of highly focused fields."
Phys. Rev. Lett.,
81, 1738 (1998).
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R. Bar-Ziv, E. Moses and
P. Nelson,
"Dynamic excitations of membrane induced by optical tweezers."
Biophys.
J, 75, 294 (1998).
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A. Meller, R. Bar-Ziv,
T. Tlusty, E. Moses, J. Stavans and S.A. Safran,
"Localized dynamic light scattering: A new approach to dynamic
measurements in optical microscopy."
Biophys.
J, 74, 1541 (1998).
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R. Bar-Ziv, T. Tlusty
and E. Moses,
"Critical dynamics in the pearling instability of membranes."
Phys. Rev. Lett.,
79, 1158 (1997).
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R. Bar-Ziv, A. Meller, T. Tlusty, E. Moses, J.
Stavans and S.A. Safran,
"Localized dynamic light scattering: Probing single particle
dynamics at the nanoscale."
Phys. Rev.
Lett., 78, 154 (1997).
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J.D. Moroz, P. Nelson,
R. Bar-Ziv and E. Moses,
"Spontaneous expulsion of giant vesicles induced by optical
tweezers."
Phys. Rev.
Lett., 78, 386 (1997).
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R. Bar-Ziv, T. Frisch
and E. Moses,
"Entropic expulsion in vesicles."
Phys.
Rev. Lett., 75, 3481 (1995).
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R. Bar-Ziv, R. Menes, E.
Moses and S. A. Safran,
"Local unbinding of pinched membranes."
Phys.
Rev. Lett., 75, 3356 (1995).
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R. Bar-Ziv and E. Moses,
"Instability and 'pearling' states produced in tubular membranes
by competition of curvature and tension."
Phys.
Rev. Lett., 73, 1392 (1994)
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R. Bar-Ziv and S. A.
Safran,
"Supercooling of surface modified phases."
Phys.
Rev. E, 49, 4306 (1994)
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R. Bar-Ziv and S. A.
Safran,
"Surface melting of ice induced by hydrocarbon films."
Langmuir, 9, 2786 (1993).
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R. Bar-Ziv and S. A.
Safran,
"Surface modification and instabilities of supercooled phases."
Europhys. Lett., 22 (4), 251 (1993).
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E. Bar-Ziv, G. de Botton,
R. Bar-Ziv, Y. Martsiano and G. Ben-Dor,
"The motion of a charged particle in an electrodynamic chamber."
Aerosol Sci. Tech., 14, 127 (1991). |
Patents
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