mfinder

Network motifs detection tool

• Manual


• Software: mfinder1.2.zip
• Source code for Windows

mfinder1.2_source.zip
• Source code for Linux mfinder1.2_unix.tar.gz
  Linux version: run 'tar -xvzf mfinder1.2_unix.tar.gz', 'cd mfinder1.2', and then 'make'
• Motif dictionary
• Supplamentary materials - Milo et al. Science 2002

We also recommend other excellent tools:
(support also analysis of networks with multiple-color nodes and edges)

• FANMOD - a tool for fast network motifs detection (by S. Wernicke and F. Rasche)
• MAVisto - motif analysis and visualisation tool
  (by F. Schreiber and H. Schwobbermeyer)
• Wong E., Baur B., Quader S. and Huang C.
  Biological network motif detection: principles and practice
  Briefings in Bioinformatics (2011) PDF

mDraw

Network visualization tool

(mfinder and network motifs visualization tool)

network layouts gallery and application screenshoots

• Manual


• Software: MdrawSetup 1.0.exe