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  • Uri Alon
    Google Scholar Profile of Uri Alon
    (3000)
  • Miri Adler, Uri Alon
    Fold-Change Detection in Biological Systems
    Current Opinion in Systems Biology , (2018) [PDF]
  • Miri Adler, Avi Mayo, Xu Zhou, Ruth A. Franklin, Jeremy B. Jacox, Ruslan Medzhitov and Uri Alon
    Endocytosis as a Stabilizing Mechanism For Tissue Homeostasis
    PNAS , (2018) [PDF]
  • Zhou X, Franklin RA, Adler M, Jacox JB, Bailis W, Shyer JA, Flavell RA, Mayo A, Alon U, Medzhitov R
    Circuit Design Features of a Stable Two-Cell System.
    Cell , (2018) [PDF]
  • Hila Sheftel, Pablo Szekely, Avi Mayo, Guy Sella, Uri Alon
    Evolutionary Trade-Offs and the Structure of Polymorphisms
    Philosophical Transactions of the Royal Society b , (2018) [PDF]

    Effects of common genetic variations are predicted to push phenotypes along optimal tradeoffs.

  • Hila Sheftel; Pablo Szekely; Avi Mayo; Guy Sella; Uri Alon
    Evolutionary Trade-Offs and the Structure of Polymorphisms
    Philosophical Transactions of the Royal Society of London Series b-Biological Sciences , 373:3794e1fe-6 (2018)
  • Yael Korem Kohanim; Dikla Levi; Ghil Jona; Benjamin D. Towbin; Anat Bren; Uri Alon
    A Bacterial Growth Law Out of Steady State
    Cell Reports , 23:dfdd4f25-0 (2018)
  • Miri Adler; Avi Mayo; Xu Zhou; Ruth A. Franklin; Jeremy B. Jacox; Ruslan Medzhitov; Uri Alon
    Endocytosis as a Stabilizing Mechanism For Tissue Homeostasis
    Proceedings of the National Academy of Sciences of the United States of America-Biological Sciences , 115:170d0cca-0 (2018)
  • Xu Zhou; Ruth A. Franklin; Miri Adler; Jeremy B. Jacox; Will Bailis; Justin A. Shyer; Richard A. Flavell; Avi Mayo; Uri Alon; Ruslan Medzhitov
    Circuit Design Features of a Stable Two-Cell System
    Cell , 172:c9a882de-a (2018)
  • Ari Auron; Uri S. Alon
    Hypercalcemia: a Consultant's Approach
    Pediatric Nephrology , 33:1082fbf5-b (2018)
  • Yuvalal Liron; Nem Raindel; Uri Alon
    Dramatic Action: a theater-Based Paradigm For Analyzing Human Interactions
    PLoS ONE , 13:37f28ef3-6 (2018)
  • Adler M; Szekely P; Mayo A; Alon U
    Optimal Regulatory Circuit Topologies For Fold-Change Detection
    Cell Systems , (2017) [PDF]
    • Out of a million possible circuits, only very few show optimal fold change detection - possibly explaining why only a few circuit designs recur across biology.
    • Cell Systems preview
  • Towbin BD; Korem Y; Bren A; Doron S; Sorek R; Alon U;
    Optimality and Sub-Optimality in a Bacterial Growth Law
    Nature Communications , (2017) [PDF]

    Bacteria use a rule of thumb to optimize growth rate, which often works but sometimes fails

  • Omer Karin, Uri Alon
    Biphasic Response as a Mechanism Against Mutant Takeover in Tissue Homeostasis Circuits
    Molecular Systems Biology , (2017) [PDF]

    Biphasic control, where a signal is toxic at both high and low levels, eliminates mis-sensing mutants at the cost of decreased resilience to dynamic perturbations, with implications for different diseases.

  • Yuval Hart, Avraham E Mayo, Ruth Mayo, Liron Rozenkrantz, Avichai Tendler, Uri Alon, Lior Noy
    Creative Foraging: an Experimental Paradigm For Studying Exploration and Discovery
    PLoS ONE , (2017)
  • Yuval Hart; Avraham E. Mayo; Ruth Mayo; Liron Rozenkrantz; Avichai Tendler; Uri Alon; Lior Noy
    Creative Foraging: an Experimental Paradigm For Studying Exploration and Discovery
    PLoS ONE , 12:000055815 (2017)
  • Miri Adler; Pablo Szekely; Avi Mayo; Uri Alon
    Optimal Regulatory Circuit Topologies For Fold-Change Detection
    Cell Systems , 4:0003957861 (2017)
  • Omer Karin; Uri Alon
    Biphasic Response as a Mechanism Against Mutant Takeover in Tissue Homeostasis Circuits
    Molecular Systems Biology , 13:000055632 (2017)
  • Benjamin D. Towbin; Yael Korem; Anat Bren; Shany Doron; Rotem Sorek; Uri Alon
    Optimality and Sub-Optimality in a Bacterial Growth Law
    Nature Communications , 8:000050237 (2017)
  • Guy Gaziv; Lior Noy; Yuvalal Liron; Uri Alon
    A Reduced-Dimensionality Approach to Uncovering Dyadic Modes of Body Motion in Conversations
    PLoS ONE , 12:0003961295 (2017)
  • Anat Zimmer; Farkash, Shlomit Amar Farkash; Tamar Danon; Uri Alon
    Dynamic Proteomics Reveals Bimodal Protein Dynamics of Cancer Cells in Response to Hsp90 Inhibitor
    Bmc Systems Biology , 11:000050610 (2017)
  • Uri S. Alon; Dale Jarka; Penny J. Monachino; Judith Sebestyen VanSickle; Tarak Srivastava
    Cinacalcet as an Alternative to Phosphate therapy in x-Linked Hypophosphataemic Rickets
    Clinical Endocrinology , 87:f92930ac-d (2017)
  • Nir Drayman; Omer Karin; Avi Mayo; Tamar Danon; Lev Shapira; Dor Rafael; Anat Zimmer; Anat Bren; Oren Kobiler; Uri Alon
    Dynamic Proteomics of Herpes Simplex Virus Infection
    Mbio , 8:b70d8bd9-d (2017)
  • Anat Zimmer; Avichai Tendler; Itay Katzir; Avi Mayo; Uri Alon
    Prediction of Drug Cocktail Effects When the Number of Measurements is Limited
    PLoS Biology , 15:0e94d2ab-9 (2017)
  • Liron Rozenkrantz; Avraham E. Mayo; Tomer Ilan; Yuval Hart; Lior Noy; Uri Alon
    Placebo Can Enhance Creativity
    PLoS ONE , 12:000061603 (2017)
  • Arigela Harikumar; Raghu Ram Edupuganti; Matan Sorek; Gajendra Kumar Azad; Styliani Markoulaki; Petra Sehnalova; Sona Legartova; Eva Bartova; Shlomit Farkash-Amar; Rudolf Jaenisch; Uri Alon; Eran Meshorer
    An Endogenously Tagged Fluorescent Fusion Protein Library in Mouse Embryonic Stem Cells
    Stem Cell Reports , 9:6c5745fc-d (2017)
  • Jean Hausser; Pablo Szekely; Nadav Bar; A. Tzimmer; C. Caldas; Uri Alon
    Evolutionary Trade-Offs in Tumor Development
    Febs Journal , 284:000061795 (2017)
  • Guy Gaziv; Lior Noy; Yuvalal Liron; Uri Alon
    A Reduced-Dimensionality Approach to Uncovering Dyadic Modes of Body Motion in Conversations
    PLoS ONE , 12:c7eb788d-7 (2017)
  • Alon, U
    Evolutionary Tradeoffs and the Geometry of Phenotype Space
    Febs Journal , (2017)
  • Miri Adler; Pablo Szekely; Avi Mayo; Uri Alon
    Optimal Regulatory Circuit Topologies For Fold-Change Detection
    Cell Systems , 4:310773e9-8 (2017)
  • Arigela Harikumar; Raghu Ram Edupuganti; Matan Sorek; Gajendra Kumar Azad; Styliani Markoulaki; Petra Sehnalova; Sona Legartova; Eva Bartova; Shlomit Farkash-Amar; Rudolf Jaenisch; Uri Alon; Eran Meshorer
    An Endogenously Tagged Fluorescent Fusion Protein Library in Mouse Embryonic Stem Cells
    Stem Cell Reports , 9:0004126600 (2017)
  • Anat Zimmer; Avichai Tendler; Itay Katzir; Avi Mayo; Uri Alon
    Prediction of Drug Cocktail Effects When the Number of Measurements is Limited
    PLoS Biology , 15:urn:bbbc6d (2017)
  • Karin O; Swisa A; Glaser B; Dor Y; Alon U;
    Dynamical Compensation in Physiological Circuits
    Molecular Systems Biology , (2016) [PDF]

    Dynamical compensation provides robustness of the entire output trace robust to variation in key parameters and appears in endocrine and neuronal circuits

  • Hart Y., Czerniak E., Karnieli-Miller O., Mayo A., Ziv A., Biegon A., Citron A., Alon U.
    Automated Video Analysis of Non-Verbal Communication in a Medical Setting
    Frontiers in Psychology , (2016) [PDF]

     Doctor patient body language associated with good placebo shows more synchrony and balanced leadership

  • Yaroshevich, A; Bar-Yosef, O; Boaretto, E; Caracuta, V; Greenbaum, N; Porat, N; Roskin, J
    A Unique Assemblage of Engraved Plaquettes From Ein Qashish South, Jezreel Valley, Israel: Figurative and Non-Figurative Symbols of Late Pleistocene Hunters-Gatherers in the Levant
    PLoS ONE , 11:e0160687 (2016)
  • Yuval Hart; Efrat Czerniak; Orit Karnieli-Miller; Avraham E. Mayo; Amitai Ziv; Anat Biegon; Atay Citron; Uri Alon
    Automated Video Analysis of Non-Verbal Communication in a Medical Setting
    Frontiers in Psychology , 7:000049386 (2016)
  • Alon, U
    Evolutionary Tradeoffs and the Geometry of Gene Expression Space
    Febs Journal , (2016)
  • Anat Bren; Junyoung O. Park; Benjamin D. Towbin; Erez Dekel; Joshua D. Rabinowitz; Uri Alon
    Glucose Becomes One of the Worst Carbon Sources For e-Coli on Poor Nitrogen Sources Due to Suboptimal Levels of CAMP
    Scientific Reports , 6:000048855 (2016)
  • Efrat Czerniak; Anat Biegon; Amitai Ziv; Orit Karnieli-Miller; Mark Weiser; Uri Alon; Atay Citron
    Manipulating the Placebo Response in Experimental Pain by Altering Doctor's Performance Style
    Frontiers in Psychology , 7:000049242 (2016)
  • Leeat Keren; Jean Hausser; Maya Lotan-Pompan; Slutskin, Ilya Vainberg Slutskin; Hadas Alisar; Sivan Kaminski; Adina Weinberger; Uri Alon; Ron Milo; Eran Segal
    Massively Parallel Interrogation of the Effects of Gene Expression Levels on Fitness.
    Cell , 166:000049470 (2016)
  • Zimmer, A; Katzir, I; Dekel, E; Mayo, AE; Alon, U
    Prediction of Multidimensional Drug Dose Responses Based on Measurements of Drug Pairs
    Proceedings of the National Academy of Sciences of the United States of America , (2016) [PDF]
  • Dahan, A; Noy, L; Hart, Y; Mayo, A; Alon, U
    Exit From Synchrony in Joint Improvised Motion
    PLoS ONE , 11:e0160747 (2016)
  • Hart Y, Sheftel H, Hausser J, Szekely P, Ben-Moshe NB, Korem Y, Tendler A, Mayo AE, Alon U,
    Inferring Biological Tasks Using Pareto Analysis of High-Dimensional Data
    Nature Methods , (2015) [PDF]

    For accessing the package:  click here

  • Tendler, A; Mayo, A; Alon, U
    Evolutionary Tradeoffs, Pareto Optimality and the Morphology of Ammonite Shells
    Bmc Systems Biology , 9:12 (2015) [PDF]

    Editors Pick BMC Systems Biology:

    "Optimizing ammonite forms

    Across ammonite genera, trade-offs between different shape phenotypes resulted in a small range of successful forms, that could be represented by a pyramid in the diagram of possible shape parameters, with each point representing an optimized archetype.

    BMC Systems Biology 2015, 9:12"

  • Friedlander T, Mayo AE, Tlusty T, Alon U,
    Evolution of Bow-Tie Architectures in Biology
    Plos Computational Biology , 11:UNSP e1004 (2015) [PDF]
  • Korem Y, Szekely P, Hart Y, Sheftel H, Hausser J,Mayo A, Rothenberg ME, Kalisky T, Alon U
    Geometry of the Gene Expression Space of Individual Cells
    Plos Computational Biology , (2015) [PDF] [SOM]
  • Pablo Szekely; Yael Korem; Uri Moran; Avi Mayo; Uri Alon
    The Mass-Longevity Triangle: Pareto Optimality and the Geometry of Life-History Trait Space.
    Plos Computational Biology , 11:000047650 (2015) [PDF]
  • Noy L, Levit-Binun N, Golland Y,
    Being in the Zone: Physiological Markers of Togetherness in Joint Improvisation
    Frontiers in Human Neuroscience , 9:187 (2015) [PDF]
  • Feniger-Schaal, R; Noy, L; Hart, Y; Koren-Karie, N; Mayo, A E; Alon, U
    Would You Like to Play Together? Adults' Attachment and the Mirror Game
    Attachment &Amp; Human Development , (2015) [PDF]
  • Noy L, Alon U, Friedman J
    Corrective Jitter Motion Shows Similar Individual Frequencies For the Arm and the Finger
    Experimental Brain Research , (2015) [PDF]
  • Avichai Tendler; Avraham Mayo; Uri Alon
    Evolutionary Tradeoffs, Pareto Optimality and the Morphology of Ammonite Shells
    Bmc Systems Biology , 9:000045832 (2015)
  • Lior Noy; Uri Alon; Jason Friedman
    Corrective Jitter Motion Shows Similar Individual Frequencies For the Arm and the Finger
    Experimental Brain Research , 233:000045279 (2015)
  • Yuval Hart; Hila Sheftel; Jean Hausser; Pablo Szekely; Noa Bossel Ben-Moshe; Yael Korem; Avichai Tendler; Avraham E. Mayo; Uri Alon
    Inferring Biological Tasks Using Pareto Analysis of High-Dimensional Data
    Nature Methods , 12:000045342 (2015)
  • Rothschild, D; Dekel, E; Hausser, J; Bren, A; Aidelberg, G; Szekely, P; Alon, U
    Linear Superposition and Prediction of Bacterial Promoter Activity Dynamics in Complex Conditions
    Plos Computational Biology , 10:e1003602 (2014) [PDF]
  • Yuval Hart, Shlomit Reich-Zeliger, Yaron E. Antebi, Irina Zaretsky, Avraham E. Mayo, Uri Alon, Nir Friedman
    Paradoxical Signaling by a Secreted Molecule Leads to Homeostasis of Cell Levels
    Cell , (2014) [PDF]
  • Adler, M; Mayo, A; Alon, U
    Logarithmic and Power Law Input-Output Relations in Sensory Systems With Fold-Change Detection
    Plos Computational Biology , 10:e1003781 (2014) [PDF]
  • Aidelberg G, Towbin BD, Rothschild D, Dekel E, Bren A, Alon U,
    Hierarchy of Non-Glucose Sugars in Escherichia Coli
    Bmc Systems Biology , 8:133 (2014) [PDF]
  • Farkash-Amar, S; Zimmer, A; Eden, E; Cohen, A; Geva-Zatorsky, N; Cohen, L; Milo, R; Sigal, A; Danon, T; Alon, U
    Noise Genetics: Inferring Protein Function by Correlating Phenotype With Protein Levels and Localization in Individual Human Cells
    Plos Genetics , 10:e1004176 (2014) [PDF]
  • Noy L
    The Mirror Game: a Natural Science Study of Togetherness
    In: Citron, Atay, Sharon Aronson-Lehavi, and David Zerbib, Eds. Performance Studies in Motion: International Perspectives and Practices in the Twenty-First Century , (2014) [PDF] [SOM]
  • Hart Y, Noy L, Feniger-Schaal R, Mayo AE, Alon U,
    Individuality and Togetherness in Joint Improvised Motion
    PLoS ONE , 9:e87213 (2014) [PDF]
  • Miri Adler; Avi Mayo; Uri Alon
    Logarithmic and Power Law Input-Output Relations in Sensory Systems With Fold-Change Detection
    Plos Computational Biology , 10:000044248 (2014)
  • Shlomit Farkash-Amar; Anat Zimmer; Eran Eden; Ariel Cohen; Zatorsky, Naama Geva Zatorsky; Lydia Cohen; Ron Milo; Alex Sigal; Tamar Danon; Uri Alon
    Noise Genetics: Inferring Protein Function by Correlating Phenotype With Protein Levels and Localization in Individual Human Cells
    Plos Genetics , 10:000044673 (2014)
  • Daphna Rothschild; Erez Dekel; Jean Hausser; Anat Bren; Guy Aidelberg; Pablo Szekely; Uri Alon
    Linear Superposition and Prediction of Bacterial Promoter Activity Dynamics in Complex Conditions
    Plos Computational Biology , 10:000044863 (2014)
  • Tathagata Dasgupta; David H. Croll; Jeremy A. Owen; Heiden, Matthew G. Vander Heiden; Jason W. Locasale; Uri Alon; Lewis C. Cantley; Jeremy Gunawardena
    A Fundamental Trade-Off in Covalent Switching and Its Circumvention by Enzyme Bifunctionality in Glucose Homeostasis
    Journal of Biological Chemistry , 289:000044875 (2014)
  • Dasgupta, T; Croll, DH; Owen, JA; Vander Heiden, MG; Locasale, JW; Alon, U; Cantley, LC; Gunawardena, J
    A Fundamental Trade-Off in Covalent Switching and Its Circumvention by Enzyme Bifunctionality in Glucose Homeostasis
    Journal of Biological Chemistry , (2014)
  • Yuval Hart; Lior Noy; Rinat Feniger-Schaal; AE Mayo; Uri Alon
    Individuality and Togetherness in Joint Improvised Motion
    PLoS ONE , 9:000045974 (2014)
  • Guy Aidelberg; Benjamin D. Towbin; Daphna Rothschild; Erez Dekel; Anat Bren; Uri Alon
    Hierarchy of Non-Glucose Sugars in Escherichia Coli
    Bmc Systems Biology , 8:000045521 (2014)
  • Rozenkrantz, L; Noy, L; Hart, Y; Mayo, A; Alon, U
    Increasing Creativity Using the Placebo Effect
    Journal of Molecular Neuroscience , (2014)
  • Yuval Hart; Shlomit Reich-Zeliger; Yaron E. Antebi; Irina Zaretsky; Avraham E. Mayo; Uri Alon; Nir Friedman
    Paradoxical Signaling by a Secreted Molecule Leads to Homeostasis of Cell Levels
    Cell , 158:000044303 (2014)
  • Hart Y, Alon U
    The Utility of Paradoxical Components in Biological Circuits
    Molecular Cell , (2013) [PDF]
  • Leeat Keren; Ora Zackay; Maya Lotan-Pompan; Uri Barenholz; Erez Dekel; Vered Sasson; Guy Aidelberg; Anat Bren; Danny Zeevi; Adina Weinberger; Uri Alon; Ron Milo; Eran Segal
    Promoters Maintain their Relative Activity Levels Under Different Growth Conditions
    Molecular Systems Biology , 9:000021320 (2013) [PDF]
  • Madar D, Dekel E, Bren A, Zimmer A, Porat Z, Alon U,
    Promoter Activity Dynamics in the Lag Phase of Escherichia Coli
    Bmc Systems Biology , 7:136 (2013) [PDF]

    Commentary by Daniel Schultz and Roy Kishony

  • Anat Bren; Yuval Hart; Erez Dekel; Daniel Koster; Uri Alon
    The Last Generation of Bacterial Growth in Limiting Nutrient
    Bmc Systems Biology , 7:000007820 (2013) [PDF]
  • Yuval Hart; Avraham E. Mayo; Oren Shoval; Uri Alon
    Comparing Apples and Oranges: Fold-Change Detection of Multiple Simultaneous Inputs
    PLoS ONE , 8:000018118 (2013) [PDF]
  • Pablo Szekely; Hila Sheftel; Avi Mayo; Uri Alon
    Evolutionary Tradeoffs Between Economy and Effectiveness in Biological Homeostasis Systems
    Plos Computational Biology , 9:000037920 (2013) [PDF]
  • Kathryn D. Kavanagh; Oren Shoval; Benjamin B. Winslow; Uri Alon; Brian P. Leary; Akinori Kan; Clifford J. Tabin
    Developmental Bias in the Evolution of Phalanges
    Proceedings of the National Academy of Sciences of the United States of America , 110:000021171 (2013) [PDF]
  • Hila Sheftel; Oren Shoval; Avi Mayo; Uri Alon
    The Geometry of the Pareto Front in Biological Phenotype Space
    Ecology and Evolution , 3:000035756 (2013) [PDF]
  • Tamar Friedlander; Avraham E. Mayo; Tsvi Tlusty; Uri Alon
    Mutation Rules and the Evolution of Sparseness and Modularity in Biological Systems
    PLoS ONE , 8:000013903 (2013) [PDF]
  • Pablo Szekely; Hila Sheftel; Avi Mayo; Uri Alon
    Evolutionary Tradeoffs Between Economy and Effectiveness in Biological Homeostasis Systems
    Plos Computational Biology , 9:000037920 (2013)
  • Tamar Friedlander; Avraham E. Mayo; Tsvi Tlusty; Uri Alon
    Mutation Rules and the Evolution of Sparseness and Modularity in Biological Systems
    PLoS ONE , 8:000013903 (2013)
  • Yuval Hart; Avraham E. Mayo; Oren Shoval; Uri Alon
    Comparing Apples and Oranges: Fold-Change Detection of Multiple Simultaneous Inputs
    PLoS ONE , 8:000018118 (2013)
  • Kathryn D. Kavanagh; Oren Shoval; Benjamin B. Winslow; Uri Alon; Brian P. Leary; Akinori Kan; Clifford J. Tabin
    Developmental Bias in the Evolution of Phalanges
    Proceedings of the National Academy of Sciences of the United States of America , 110:000021171 (2013)
  • Leeat Keren; Ora Zackay; Maya Lotan-Pompan; Uri Barenholz; Erez Dekel; Vered Sasson; Guy Aidelberg; Anat Bren; Danny Zeevi; Adina Weinberger; Uri Alon; Ron Milo; Eran Segal
    Promoters Maintain their Relative Activity Levels Under Different Growth Conditions
    Molecular Systems Biology , 9:000021320 (2013)
  • Anat Bren; Yuval Hart; Erez Dekel; Daniel Koster; Uri Alon
    The Last Generation of Bacterial Growth in Limiting Nutrient
    Bmc Systems Biology , 7:000007820 (2013)
  • Namiko Mitarai; Uri Alon; Mogens H. Jensen
    Entrainment of Noise-Induced and Limit Cycle Oscillators Under Weak Noise
    Chaos , 23:000027494 (2013)
  • Yuval Hart; Uri Alon
    The Utility of Paradoxical Components in Biological Circuits
    Molecular Cell , 49:000018114 (2013)
  • Namiko Mitarai; Uri Alon; Mogens H. Jensen
    Entrainment of Noise-Induced and Limit Cycle Oscillators Under Weak Noise
    Chaos , 23:000027494 (2013)
  • Oren Shoval; Hila Sheftel; Guy Shinar; Yuval Hart; Omer Ramote; Avi Mayo; Erez Dekel; Kathryn Kavanagh; Uri Alon
    Response to Comment on &Quot;Evolutionary Trade-Offs, Pareto Optimality, and the Geometry of Phenotype Space&Quot;
    Science , 339:000036282 (2013)
  • Hila Sheftel; Oren Shoval; Avi Mayo; Uri Alon
    The Geometry of the Pareto Front in Biological Phenotype Space
    Ecology and Evolution , 3:000035756 (2013)
  • Olin K. Silander; Nela Nikolic; Alon Zaslaver; Anat Bren; Ilya Kikoin; Uri Alon; Martin Ackermann
    A Genome-Wide Analysis of Promoter-Mediated Phenotypic Noise in Escherichia Coli
    Plos Genetics , 8:000036466 (2012)
  • Yuval Hart; Yaron E. Antebi; Avraham E. Mayo; Nir Friedman; Uri Alon
    Design Principles of Cell Circuits With Paradoxical Components
    Proceedings of the National Academy of Sciences of the United States of America , 109:000018115 (2012) [PDF] [SOM]
  • Vered Sasson; Irit Shachrai; Anat Bren; Erez Dekel; Uri Alon
    Mode of Regulation and the Insulation of Bacterial Gene Expression
    Molecular Cell , 46:000033772 (2012) [PDF] [SOM]
  • Shlomit Farkash-Amar; Eran Eden; Ariel Cohen; Zatorsky, Naama Geva Zatorsky; Lydia Cohen; Ron Milo; Alex Sigal; Tamar Danon; Uri Alon
    Dynamic Proteomics of Human Protein Level and Localization Across the Cell Cycle
    PLoS ONE , 7:000012765 (2012) [PDF]
  • Zatorsky, Naama Geva Zatorsky; Irina Issaeva; Avi Mayo; Ariel Cohen; Erez Dekel; Tamar Danon; Lydia Cohen; Yuvalal Liron; Uri Alon; Eran Eden
    Using Bleach-Chase to Measure Protein Half-Lives in Living Cells
    Nature Protocols , 7:000015208 (2012) [PDF]
  • Oren Shoval; Hila Sheftel; Guy Shinar; Yuval Hart; Omer Ramote; Avi Mayo; Erez Dekel; K. Kavanagh; Uri Alon
    Evolutionary Trade-Offs, Pareto Optimality, and the Geometry of Phenotype Space
    Science , 336:000036281 (2012) [PDF] [SOM]
    • See also Science Perspective: [PDF]
  • Noy L, Hart Y, Andrew N, Ramote O, Mayo A, Alon U
    A Quantitative Study of Creative Leaps
    International Conference on Computational Creativity , (2012) [PDF]
  • Uri Alon
    Design Principles of Biological Circuits
    , :000002650 (2012)
  • Shlomit Farkash-Amar; Eran Eden; Ariel Cohen; Zatorsky, Naama Geva Zatorsky; Lydia Cohen; Ron Milo; Alex Sigal; Tamar Danon; Uri Alon
    Dynamic Proteomics of Human Protein Level and Localization Across the Cell Cycle
    PLoS ONE , 7:000012765 (2012)
  • Vered Sasson; Irit Shachrai; Anat Bren; Erez Dekel; Uri Alon
    Mode of Regulation and the Insulation of Bacterial Gene Expression
    Molecular Cell , 46:000033772 (2012)
  • Oren Shoval; Hila Sheftel; Guy Shinar; Yuval Hart; Omer Ramote; Avi Mayo; Erez Dekel; K. Kavanagh; Uri Alon
    Evolutionary Trade-Offs, Pareto Optimality, and the Geometry of Phenotype Space
    Science , 336:000036281 (2012)
  • Olin K. Silander; Nela Nikolic; Alon Zaslaver; Anat Bren; Ilya Kikoin; Uri Alon; Martin Ackermann
    A Genome-Wide Analysis of Promoter-Mediated Phenotypic Noise in Escherichia Coli
    Plos Genetics , 8:000036466 (2012)
  • Zatorsky, Naama Geva Zatorsky; Irina Issaeva; Avi Mayo; Ariel Cohen; Erez Dekel; Tamar Danon; Lydia Cohen; Yuvalal Liron; Uri Alon; Eran Eden
    Using Bleach-Chase to Measure Protein Half-Lives in Living Cells
    Nature Protocols , 7:000015208 (2012)
  • Yuval Hart; Yaron E. Antebi; Avraham E. Mayo; Nir Friedman; Uri Alon
    Design Principles of Cell Circuits With Paradoxical Components
    Proceedings of the National Academy of Sciences of the United States of America , 109:000018115 (2012)
  • Daniel A. Koster; Avraham Mayo; Anal Bren; Uri Alon
    Surface Growth of a Motile Bacterial Population Resembles Growth in a Chemostat
    Journal of Molecular Biology , 424:000022386 (2012)
  • Daniel A. Koster; Avraham Mayo; Anal Bren; Uri Alon
    Surface Growth of a Motile Bacterial Population Resembles Growth in a Chemostat
    Journal of Molecular Biology , 424:000022386 (2012) [PDF]
  • Daniel Madar; Erez Dekel; Anat Bren; Uri Alon
    Negative Auto-Regulation Increases the Input Dynamic-Range of the Arabinose System of Escherichia Coli
    Bmc Systems Biology , 5:000025621 (2011) [PDF] [SOM]
  • Anat Bren; Uri Alon
    Architecture and Dynamics of Transcriptional Networks
    Bacterial Stress Responses, 2nd Edition , :000000160 (2011) [PDF]
  • Madar D, Hart Y, Yuan J, Bren A, Mayo AE, Rabinowitz JD, Alon U,
    Robust Control of Nitrogen Assimilation by a Bifunctional Enzyme in e. Coli
    Febs Journal , (2011)
  • Oren Shoval; Uri Alon; Eduardo Sontag
    Symmetry Invariance For Adapting Biological Systems
    Siam Journal on Applied Dynamical Systems , 10:000036279 (2011)
  • Yuval Hart; Avraham E. Mayo; Ron Milo; Uri Alon
    Robust Control of Pep Formation Rate in the Carbon Fixation Pathway of c-4 Plants by a Bifunctional Enzyme
    Bmc Systems Biology , 5:000018117 (2011) [PDF]
  • Yuval Hart; Daniel Madar; Jie Yuan; Anat Bren; Avraham E. Mayo; Joshua D. Rabinowitz; Uri Alon
    Robust Control of Nitrogen Assimilation by a Bifunctional Enzyme in E. Coli
    Molecular Cell , 41:000018116 (2011) [PDF]
  • Eran Eden; Zatorsky, Naama Geva Zatorsky; Irina Issaeva; Ariel Cohen; Erez Dekel; Tamar Danon; Lydia Cohen; Avi Mayo; Uri Alon
    Proteome Half-Life Dynamics in Living Human Cells
    Science , 331:000011535 (2011) [PDF] [SOM]
  • Lior Noy; Erez Dekel; Uri Alon
    The Mirror Game as a Paradigm For Studying the Dynamics of Two People Improvising Motion Together
    PNAS , 108:000028956 (2011) [PDF]
  • Daniel Madar; Yuval Hart; J. Yuan; Anat Bren; A. E. Mayo; J. D. Rabinowitz; Uri Alon
    Robust Control of Nitrogen Assimilation by a Bifunctional Enzyme in E. Coli
    , :000025622 (2011)
  • Oren Shoval; Uri Alon; Eduardo Sontag
    Input Symmetry Invariance, and Applications to Biological Systems
    , :000000693 (2011)
  • Eran Eden; Zatorsky, Naama Geva Zatorsky; Irina Issaeva; Ariel Cohen; Erez Dekel; Tamar Danon; Lydia Cohen; Avi Mayo; Uri Alon
    Proteome Half-Life Dynamics in Living Human Cells
    Science , 331:000011535 (2011)
  • Galia S. Moran; Uri Alon
    Playback theatre and Recovery in Mental Health: Preliminary Evidence
    Arts in Psychotherapy , 38:000027713 (2011) [PDF]
  • Galia S. Moran; Uri Alon
    Playback theatre and Recovery in Mental Health: Preliminary Evidence
    Arts in Psychotherapy , 38:000027713 (2011)
  • Yuval Hart; Daniel Madar; Jie Yuan; Anat Bren; Avraham E. Mayo; Joshua D. Rabinowitz; Uri Alon
    Robust Control of Nitrogen Assimilation by a Bifunctional Enzyme in E. Coli
    Molecular Cell , 41:000018116 (2011)
  • Lior Noy; Erez Dekel; Uri Alon
    The Mirror Game as a Paradigm For Studying the Dynamics of Two People Improvising Motion Together
    Proceedings of the National Academy of Sciences of the United States of America , 108:000028956 (2011)
  • Yuval Hart; Avraham E. Mayo; Ron Milo; Uri Alon
    Robust Control of Pep Formation Rate in the Carbon Fixation Pathway of c-4 Plants by a Bifunctional Enzyme
    Bmc Systems Biology , 5:000018117 (2011)
  • Oren Shoval; Uri Alon; Eduardo Sontag
    Symmetry Invariance For Adapting Biological Systems
    Siam Journal on Applied Dynamical Systems , 10:000036279 (2011)
  • Daniel Madar; Erez Dekel; Anat Bren; Uri Alon
    Negative Auto-Regulation Increases the Input Dynamic-Range of the Arabinose System of Escherichia Coli
    Bmc Systems Biology , 5:000025621 (2011)
  • Oren Shoval; Uri Alon
    Snapshot: Network Motifs
    Cell , 143:000036278 (2010)
  • Guy Shinar, Martin Feinberg
    Structural Sources of Robustness in Biochemical Reaction Networks
    Science , (2010) [PDF]
  • Irit Shachrai; Alon Zaslaver; Uri Alon; Erez Dekel
    Cost of Unneeded Proteins in e. Coil is Reduced After Several Generations in Exponential Growth
    Molecular Cell , 38:000035032 (2010) [PDF]
  • Oren Shoval; Lea Goentoro; Yuval Hart; Avi Mayo; Eduardo Sontag; Uri Alon
    Fold-Change Detection and Scalar Symmetry of Sensory Input Fields
    Proceedings of the National Academy of Sciences of the United States of America , 107:000036280 (2010) [PDF]
  • Elad Noor; Eran Eden; Ron Milo; Uri Alon
    Central Carbon Metabolism as a Minimal Biochemical Walk Between Precursors For Biomass and Energy
    Molecular Cell , 39:000028865 (2010) [PDF]
  • Zatorsky, Naama Geva Zatorsky; Erez Dekel; Ariel Cohen; Tamar Danon; Lydia Cohen; Uri Alon
    Protein Dynamics in Drug Combinations: a Linear Superposition of Individual-Drug Responses
    Cell , 140:000015207 (2010) [PDF]

    BioWorld: [PDF]

  • Milana Frenkel-Morgenstern; Ariel Cohen; Zatorsky, Naama Geva Zatorsky; Eran Eden; Jaime Prilusky; Irina Issaeva; Alex Sigal; Cellina Cohen-Saidon; Yuvalal Liron; Lydia Cohen; Tamar Danon; Natalie Perzov; Uri Alon
    Dynamic Proteomics: a Database For Dynamics and Localizations of Endogenous Fluorescently-Tagged Proteins in Living Human Cells
    Nucleic Acids Research , 38:000013795 (2010) [PDF]
  • Zatorsky, Naama Geva Zatorsky; Erez Dekel; Eric Batchelor; Galit Lahav; Uri Alon
    Fourier Analysis and Systems Identification of the P53 Feedback Loop
    Proceedings of the National Academy of Sciences of the United States of America , 107:000015206 (2010) [PDF]
  • Zatorsky, Naama Geva Zatorsky; A. A. Cohen; Eran Eden; Erez Dekel; Milana Frenkel-Morgenstern; Irina Issaeva; Tamar Danon; Liron Cohen; N. Perzov; Ron Milo; A. Sigal; Uri Alon
    Dynamics Proteomics of Individual Cancer Cells in Response to Drugs
    , :000015205 (2010)
  • Irina Issaeva; Ariel Cohen; Eran Eden; Cellina Cohen-Saidon; Tamar Danon; Lydia Cohen; Uri Alon
    Generation of Double-Labeled Reporter Cell Lines For Studying co-Dynamics of Endogenous Proteins in Individual Human Cells
    PLoS ONE , 5:000019668 (2010) [PDF]
  • Jay A. Rosenheim; Uri Alon; Guy Shinar
    Evolutionary Balancing of Fitness-Limiting Factors
    American Naturalist , 175:000032823 (2010)
  • Milana Frenkel-Morgenstern; Ariel Cohen; Zatorsky, Naama Geva Zatorsky; Eran Eden; Jaime Prilusky; Irina Issaeva; Alex Sigal; Cellina Cohen-Saidon; Yuvalal Liron; Lydia Cohen; Tamar Danon; Natalie Perzov; Uri Alon
    Dynamic Proteomics: a Database For Dynamics and Localizations of Endogenous Fluorescently-Tagged Proteins in Living Human Cells
    Nucleic Acids Research , 38:000013795 (2010)
  • Uri Alon
    How to Build a Motivated Research Group
    Molecular Cell , 37:000002652 (2010) [PDF]
  • Uri Alon
    Design Principles of Biological Circuits
    , :000002651 (2010)
  • Zatorsky, Naama Geva Zatorsky; Erez Dekel; Eric Batchelor; Galit Lahav; Uri Alon
    Fourier Analysis and Systems Identification of the P53 Feedback Loop
    Proceedings of the National Academy of Sciences of the United States of America , 107:000015206 (2010)
  • Uri Alon
    How to Build a Motivated Research Group
    Molecular Cell , 37:000002652 (2010)
  • Zatorsky, Naama Geva Zatorsky; Erez Dekel; Ariel Cohen; Tamar Danon; Lydia Cohen; Uri Alon
    Protein Dynamics in Drug Combinations: a Linear Superposition of Individual-Drug Responses
    Cell , 140:000015207 (2010)
  • Elad Noor; Eran Eden; Ron Milo; Uri Alon
    Central Carbon Metabolism as a Minimal Biochemical Walk Between Precursors For Biomass and Energy
    Molecular Cell , 39:000028865 (2010)
  • Irina Issaeva; Ariel Cohen; Eran Eden; Cellina Cohen-Saidon; Tamar Danon; Lydia Cohen; Uri Alon
    Generation of Double-Labeled Reporter Cell Lines For Studying co-Dynamics of Endogenous Proteins in Individual Human Cells
    PLoS ONE , 5:000019668 (2010)
  • Jay A. Rosenheim; Uri Alon; Guy Shinar
    Evolutionary Balancing of Fitness-Limiting Factors
    American Naturalist , 175:000032823 (2010)
  • Irit Shachrai; Alon Zaslaver; Uri Alon; Erez Dekel
    Cost of Unneeded Proteins in e. Coil is Reduced After Several Generations in Exponential Growth
    Molecular Cell , 38:000035032 (2010)
  • Oren Shoval; Uri Alon
    Snapshot: Network Motifs
    Cell , 143:000036278 (2010)
  • Oren Shoval; Lea Goentoro; Yuval Hart; Avi Mayo; Eduardo Sontag; Uri Alon
    Fold-Change Detection and Scalar Symmetry of Sensory Input Fields
    Proceedings of the National Academy of Sciences of the United States of America , 107:000036280 (2010)
  • Ofer Rahat; Uri Alon; Yaakov Levy; Gideon Schreiber
    Understanding Hydrogen-Bond Patterns in Proteins Using Network Motifs
    Bioinformatics , 25:000031370 (2009)
  • Lea Goentoro; Oren Shoval; Marc W. Kirschner; Uri Alon
    The Incoherent Feedforward Loop Can Provide Fold-Change Detection in Gene Regulation
    Molecular Cell , 36:000015713 (2009) [PDF]
  • Guy Shinar; Uri Alon; Martin Feinberg
    Sensitivity and Robustness in Chemical Reaction Networks
    Siam Journal on Applied Mathematics , 69:000036033 (2009) [PDF]
  • Guy Shinar; Joshua D. Rabinowitz; Uri Alon
    Robustness in Glyoxylate Bypass Regulation
    Plos Computational Biology , 5:000036041 (2009) [PDF]
  • Zaslaver, A; Kaplan, S; Bren, A; Jinich, A; Mayo, A; Dekel, E; Alon, U; Itzkovitz, S
    Invariant Distribution of Promoter Activities in Escherichia Coli
    Plos Computational Biology , (2009) [PDF]
  • Kfir Oved; Eran Eden; Martin Akerman; Roy Noy; Ron Wolchinsky; Orit Izhaki; Ester Schallmach; Adva Kubi; Naama Zabari; Jacob Schachter; Uri Alon; Yael Mandel-Gutfreund; Michal J. Besser; Yoram Reiter
    Predicting and Controlling the Reactivity of Immune Cell Populations Against Cancer
    Molecular Systems Biology , 5:000029491 (2009)
  • Cellina Cohen-Saidon; A. A. Cohen; A. Sigal; Uri Alon
    Dynamics of Erk2 in Individual Living Human Cells
    , :000009787 (2009)
  • Ariel Cohen; Tomer Kalisky; Avi Mayo; Zatorsky, Naama Geva Zatorsky; Tamar Danon; Irina Issaeva; Ronen Benjamine Kopito; Natalie Perzov; Ron Milo; Alex Sigal; Uri Alon
    Protein Dynamics in Individual Human Cells: Experiment and theory
    PLoS ONE , 4:000009444 (2009) [PDF]
  • Cellina Cohen-Saidon; Ariel Cohen; Alex Sigal; Yuvalal Liron; Uri Alon
    Dynamics and Variability of Erk2 Response to Egf in Individual Living Cells
    Molecular Cell , 36:000009788 (2009) [PDF]
  • Nadav Kashtan; Avi E. Mayo; Tomer Kalisky; Uri Alon
    An Analytically Solvable Model For Rapid Evolution of Modular Structure
    Plos Computational Biology , 5:000020859 (2009) [PDF]
  • Nadav Kashtan; Merav Parter; Erez Dekel; Avi E. Mayo; Uri Alon
    Extinctions in Heterogeneous Environments and the Evolution of Modularity
    Evolution , 63:000020861 (2009) [PDF]
  • Uri Alon
    How to Choose a Good Scientific Problem
    Molecular Cell , 35:000002653 (2009)
  • Uri Alon
    How to Give a Good Talk
    Molecular Cell , 36:000002654 (2009)
  • Ariel Cohen; Tomer Kalisky; Avi Mayo; Zatorsky, Naama Geva Zatorsky; Tamar Danon; Irina Issaeva; Ronen Benjamine Kopito; Natalie Perzov; Ron Milo; Alex Sigal; Uri Alon
    Protein Dynamics in Individual Human Cells: Experiment and theory
    PLoS ONE , 4:000009444 (2009)
  • Cellina Cohen-Saidon; Ariel Cohen; Alex Sigal; Yuvalal Liron; Uri Alon
    Dynamics and Variability of Erk2 Response to Egf in Individual Living Cells
    Molecular Cell , 36:000009788 (2009)
  • Kfir Oved; Eran Eden; Martin Akerman; Roy Noy; Ron Wolchinsky; Orit Izhaki; Ester Schallmach; Adva Kubi; Naama Zabari; Jacob Schachter; Uri Alon; Yael Mandel-Gutfreund; Michal J. Besser; Yoram Reiter
    Predicting and Controlling the Reactivity of Immune Cell Populations Against Cancer
    Molecular Systems Biology , 5:000029491 (2009)
  • Ofer Rahat; Uri Alon; Yaakov Levy; Gideon Schreiber
    Understanding Hydrogen-Bond Patterns in Proteins Using Network Motifs
    Bioinformatics , 25:000031370 (2009)
  • Guy Shinar; Joshua D. Rabinowitz; Uri Alon
    Robustness in Glyoxylate Bypass Regulation
    Plos Computational Biology , 5:000036041 (2009)
  • Guy Shinar; Uri Alon; Martin Feinberg
    Sensitivity and Robustness in Chemical Reaction Networks
    Siam Journal on Applied Mathematics , 69:000036033 (2009)
  • Uri Alon
    How to Choose a Good Scientific Problem
    Molecular Cell , 35:000002653 (2009)
  • Lea Goentoro; Oren Shoval; Marc W. Kirschner; Uri Alon
    The Incoherent Feedforward Loop Can Provide Fold-Change Detection in Gene Regulation
    Molecular Cell , 36:000015713 (2009)
  • Nadav Kashtan; Avi E. Mayo; Tomer Kalisky; Uri Alon
    An Analytically Solvable Model For Rapid Evolution of Modular Structure
    Plos Computational Biology , 5:000020859 (2009)
  • Uri Alon
    How to Give a Good Talk
    Molecular Cell , 36:000002654 (2009)
  • Nadav Kashtan; Merav Parter; Erez Dekel; Avi E. Mayo; Uri Alon
    Extinctions in Heterogeneous Environments and the Evolution of Modularity
    Evolution , 63:000020861 (2009)
  • Alon Zaslaver; Shai Kaplan; Anat Bren; Adrian Jinich; Avi Mayo; Erez Dekel; Uri Alon; Shalev Itzkovitz
    Invariant Distribution of Promoter Activities in Escherichia Coli
    Plos Computational Biology , 5:000042227 (2009)
  • Shai Kaplan; Anat Bren; Alon Zaslaver; Erez Dekel; Uri Alon
    Diverse Two-Dimensional Input Functions Control Bacterial Sugar Genes
    Molecular Cell , 29:000020614 (2008) [PDF]
  • Shai Kaplan; Anat Bren; Erez Dekel; Uri Alon
    The Incoherent Feed-Forward Loop Can Generate Non-Monotonic Input Functions For Genes
    Molecular Systems Biology , 4:000020613 (2008) [PDF]
  • A. A. Cohen; Zatorsky, Naama Geva Zatorsky; Eran Eden; Milana Frenkel-Morgenstern; Irina Issaeva; A. Sigal; Ron Milo; Cellina Cohen-Saidon; Zvi Kam; Liron Cohen; Yuvalal Liron; Tamar Danon; N. Perzov; Uri Alon
    Dynamic Proteomics of Individual Cancer Cells in Response to a Drug
    Science , 322:000009443 (2008) [PDF] [SOM]

    See also reviews:

    • Science: [PDF]
    • Nature: [PDF]
    • Nature Reviews Cancer: [PDF]
    • Nature Chemical Biology: [PDF]
    • Nature Biotechnology: [PDF]
    • Chemical Research in Toxicology: [PDF]
    • Journal of Proteome Research: [Link]
    • Chemical & Engineering News: [Link]
  • Oxman E., Dekel E., Alon U.
    Defined Order of Evolutionary Adaptations: Experimental Evidence.
    Evolution , (2008) [PDF]
  • Merav Parter; Nadav Kashtan; Uri Alon
    Facilitated Variation: How Evolution Learns From Past Environments to Generalize to New Environments
    Plos Computational Biology , 4:000029751 (2008) [PDF] [SOM]
  • Shai Kaplan; Anat Bren; Alon Zaslaver; Erez Dekel; Uri Alon
    Diverse Two-Dimensional Input Functions Control Bacterial Sugar Genes
    Molecular Cell , 29:000020614 (2008)
  • Uri Alon
    (Essay) a Biophysicist Learns the Art of Hugging.
    Nature , (2008) [PDF]
  • A. A. Cohen; Zatorsky, Naama Geva Zatorsky; Eran Eden; Milana Frenkel-Morgenstern; Irina Issaeva; A. Sigal; Ron Milo; Cellina Cohen-Saidon; Zvi Kam; Liron Cohen; Yuvalal Liron; Tamar Danon; N. Perzov; Uri Alon
    Dynamic Proteomics of Individual Cancer Cells in Response to a Drug
    Science , 322:000009443 (2008)
  • Merav Parter; Nadav Kashtan; Uri Alon
    Facilitated Variation: How Evolution Learns From Past Environments to Generalize to New Environments
    Plos Computational Biology , 4:000029751 (2008)
  • Shai Kaplan; Anat Bren; Erez Dekel; Uri Alon
    The Incoherent Feed-Forward Loop Can Generate Non-Monotonic Input Functions For Genes
    Molecular Systems Biology , 4:000020613 (2008)
  • Uri Alon
    Network Motifs: theory and Experimental Approaches
    Nature Reviews Genetics , 8:000002655 (2007) [PDF]
  • Nitzan Rosenfeld; Jonathan W. Young; Uri Alon; Peter S. Swain; Michael B. Elowitz
    Accurate Prediction of Gene Feedback Circuit Behavior From Component Properties
    Molecular Systems Biology , 3:000032806 (2007)
  • Guy Shinar; Ron Milo; Maria Rodriguez Martinez; Uri Alon
    Input-Output Robustness in Simple Bacterial Signaling Systems
    Proceedings of the National Academy of Sciences of the United States of America , 104:000036040 (2007) [PDF]
  • Alex Sigal; Tamar Danon; Ariel Cohen; Ron Milo; Zatorsky, Naama Geva Zatorsky; Gila Lustig; Yuvalal Liron; Uri Alon; Natalie Perzov
    Generation of a Fluorescently Labeled Endogenous Protein Library in Living Human Cells
    Nature Protocols , 2:000036441 (2007) [PDF]
  • Tomer Kalisky; Erez Dekel; Uri Alon
    Cost-Benefit theory and Optimal Design of Gene Regulation Functions
    Physical Biology , 4:000020406 (2007) [PDF]
  • Shalev Itzkovitz; Uri Alon
    The Genetic Code is Nearly Optimal For Allowing Additional Information Within Protein-Coding Sequences
    Genome Research , 17:000019706 (2007) [PDF]
    • Genome Research: [PDF]
    • Nature Reviews Genetics: [PDF]
  • Nadav Kashtan; Elad Noor; Uri Alon
    Varying Environments Can Speed up Evolution
    Proceedings of the National Academy of Sciences of the United States of America , 104:000020860 (2007) [PDF]
  • Merav Parter; Nadav Kashtan; Uri Alon
    Environmental Variability and Modularity of Bacterial Metabolic Networks
    Bmc Evolutionary Biology , 7:000029750 (2007) [PDF]
  • Guy Shinar; Ron Milo; Maria Rodriguez Martinez; Uri Alon
    Input-Output Robustness in Simple Bacterial Signaling Systems
    Proceedings of the National Academy of Sciences of the United States of America , 104:000036040 (2007)
  • Alex Sigal; Tamar Danon; Ariel Cohen; Ron Milo; Zatorsky, Naama Geva Zatorsky; Gila Lustig; Yuvalal Liron; Uri Alon; Natalie Perzov
    Generation of a Fluorescently Labeled Endogenous Protein Library in Living Human Cells
    Nature Protocols , 2:000036441 (2007)
  • Shalev Itzkovitz; Uri Alon
    The Genetic Code is Nearly Optimal For Allowing Additional Information Within Protein-Coding Sequences
    Genome Research , 17:000019706 (2007)
  • Tomer Kalisky; Erez Dekel; Uri Alon
    Cost-Benefit theory and Optimal Design of Gene Regulation Functions
    Physical Biology , 4:000020406 (2007)
  • Nadav Kashtan; Elad Noor; Uri Alon
    Varying Environments Can Speed up Evolution
    Proceedings of the National Academy of Sciences of the United States of America , 104:000020860 (2007)
  • Uri Alon
    Simplicity in Biology
    Nature , 446:000002656 (2007) [PDF]
  • Ido Amit; Ami Citri; Tal Shay; Yiling Lu; Menachem Katz; Fan Zhang; Gabi Tarcic; Doris Siwak; John Lahad; Jasmine Jacob-Hirsch; Ninette Amariglio; Nora Vaisman; Eran Segal; Gideon Rechavi; Uri Alon; Gordon B. Mills; Eytan Domany; Yosef Yarden
    A Module of Negative Feedback Regulators Defines Growth Factor Signaling
    Nature Genetics , 39:000002974 (2007) [PDF]
  • Uri Alon
    Network Motifs: theory and Experimental Approaches
    Nature Reviews Genetics , 8:000002655 (2007)
  • Uri Alon
    Simplicity in Biology
    Nature , 446:000002656 (2007)
  • Ido Amit; Ami Citri; Tal Shay; Yiling Lu; Menachem Katz; Fan Zhang; Gabi Tarcic; Doris Siwak; John Lahad; Jasmine Jacob-Hirsch; Ninette Amariglio; Nora Vaisman; Eran Segal; Gideon Rechavi; Uri Alon; Gordon B. Mills; Eytan Domany; Yosef Yarden
    A Module of Negative Feedback Regulators Defines Growth Factor Signaling
    Nature Genetics , 39:000002974 (2007)
  • Merav Parter; Nadav Kashtan; Uri Alon
    Environmental Variability and Modularity of Bacterial Metabolic Networks
    Bmc Evolutionary Biology , 7:000029750 (2007)
  • Nitzan Rosenfeld; Jonathan W. Young; Uri Alon; Peter S. Swain; Michael B. Elowitz
    Accurate Prediction of Gene Feedback Circuit Behavior From Component Properties
    Molecular Systems Biology , 3:000032806 (2007)
  • Shalev Itzkovitz; Ron Milo; Nadav Kashtan; Reuven Levitt; Amir Lahav; Uri Alon
    Recurring Harmonic Walks and Network Motifs in Western Music
    Advances in Complex Systems , 9:000019710 (2006) [PDF]
  • Ziv Frankenstein; Uri Alon; Irun R. Cohen
    The Immune-Body Cytokine Network Defines a Social Architecture of Cell Interactions
    Biology Direct , 1:000013718 (2006) [PDF]
  • S Mangan; Shalev Itzkovitz; A Zaslaver; Uri Alon
    The Incoherent Feed-Forward Loop Accelerates the Response-Time of the Gal System of Escherichia Coli
    Journal of Molecular Biology , 356:000025952 (2006) [PDF]
  • Zaslaver, A; Bren, A; Ronen, M; Itzkovitz, S; Kikoin, I; Shavit, S; Liebermeister, W; Surette, MG; Alon, U
    A Comprehensive Library of Fluorescent Transcriptional Reporters For Escherichia Coli
    Nature Methods , (2006) [PDF]
  • Guy Shinar; Erez Dekel; Tsvi Tlusty; Uri Alon
    Rules For Biological Regulation Based on Error Minimization
    Proceedings of the National Academy of Sciences of the United States of America , 103:000036034 (2006) [PDF]
  • Zatorsky, Naama Geva Zatorsky; Nitzan Rosenfeld; Shalev Itzkovitz; Ron Milo; Alex Sigal; Erez Dekel; Talia Yarnitzky; Yuvalal Liron; Paz Polak; Galit Lahav; Uri Alon
    Oscillations and Variability in the P53 System
    Molecular Systems Biology , 2:000015209 (2006) [PDF]
  • Alex Sigal; Ron Milo; Ariel Cohen; Zatorsky, Naama Geva Zatorsky; Yael Klein; Yuvalal Liron; Nitzan Rosenfeld; Tamar Danon; Natalie Perzov; Uri Alon
    Variability and Memory of Protein Levels in Human Cells
    Nature , 444:000036445 (2006) [PDF]
  • A Sigal; Ron Milo; Ayala Cohen; Zatorsky, Naama Geva Zatorsky; Yasmin A. Klein; I Alaluf; N Swerdlin; N Perzov; Tamar Danon; Yuvalal Liron; T Raveh; AE Carpenter; G Lahav; Uri Alon
    Dynamic Proteomics in Individual Human Cells Uncovers Widespread Cell-Cycle Dependence of Nuclear Proteins
    Nature Methods , 3:000036444 (2006) [PDF]
  • N Rosenfeld; TJ Perkins; Uri Alon; MB Elowitz; PS Swain
    A Fluctuation Method to Quantify in Vivo Fluorescence Data
    Biophysical Journal , 91:000032804 (2006) [PDF]
  • Shalev Itzkovitz; Tsvi Tlusty; Uri Alon
    Coding Limits on the Number of Transcription Factors
    Bmc Genomics , 7:000019714 (2006) [PDF]
  • AE Mayo; Yaakov Setty; Shlomo Shavit; A Zaslaver; Uri Alon
    Plasticity of the Cis-Regulatory Input Function of a Gene
    PLoS Biology , 4:000026523 (2006) [PDF]
  • AE Mayo; Yaakov Setty; Shlomo Shavit; A Zaslaver; Uri Alon
    Plasticity of the Cis-Regulatory Input Function of a Gene
    PLoS Biology , 4:000026523 (2006)
  • Zaslaver, A; Mayo, A; Ronen, M; Alon, U
    Optimal Gene Partition Into Operons Correlates With Gene Functional Order
    Physical Biology , (2006) [PDF]
  • N Rosenfeld; TJ Perkins; Uri Alon; MB Elowitz; PS Swain
    A Fluctuation Method to Quantify in Vivo Fluorescence Data
    Biophysical Journal , 91:000032804 (2006)
  • Guy Shinar; Erez Dekel; Tsvi Tlusty; Uri Alon
    Rules For Biological Regulation Based on Error Minimization
    Proceedings of the National Academy of Sciences of the United States of America , 103:000036034 (2006)
  • Shalev Itzkovitz; Ron Milo; Nadav Kashtan; Reuven Levitt; Amir Lahav; Uri Alon
    Recurring Harmonic Walks and Network Motifs in Western Music
    Advances in Complex Systems , 9:000019710 (2006)
  • A Sigal; Ron Milo; Ayala Cohen; Zatorsky, Naama Geva Zatorsky; Yasmin A. Klein; I Alaluf; N Swerdlin; N Perzov; Tamar Danon; Yuvalal Liron; T Raveh; AE Carpenter; G Lahav; Uri Alon
    Dynamic Proteomics in Individual Human Cells Uncovers Widespread Cell-Cycle Dependence of Nuclear Proteins
    Nature Methods , 3:000036444 (2006)
  • Shalev Itzkovitz; Tsvi Tlusty; Uri Alon
    Coding Limits on the Number of Transcription Factors
    Bmc Genomics , 7:000019714 (2006)
  • Alex Sigal; Ron Milo; Ariel Cohen; Zatorsky, Naama Geva Zatorsky; Yael Klein; Yuvalal Liron; Nitzan Rosenfeld; Tamar Danon; Natalie Perzov; Uri Alon
    Variability and Memory of Protein Levels in Human Cells
    Nature , 444:000036445 (2006)
  • S Mangan; Shalev Itzkovitz; A Zaslaver; Uri Alon
    The Incoherent Feed-Forward Loop Accelerates the Response-Time of the Gal System of Escherichia Coli
    Journal of Molecular Biology , 356:000025952 (2006)
  • Ziv Frankenstein; Uri Alon; Irun R. Cohen
    The Immune-Body Cytokine Network Defines a Social Architecture of Cell Interactions
    Biology Direct , 1:000013718 (2006)
  • Alon Zaslaver; Avi Mayo; Michal Ronen; Uri Alon
    Optimal Gene Partition Into Operons Correlates With Gene Functional Order
    Physical Biology , 3:000042228 (2006)
  • Alon Zaslaver; Anat Bren; Michal Ronen; Shalev Itzkovitz; Ilya Kikoin; Seagull Shavit; Wolfram Liebermeister; Michael G. Surette; Uri Alon
    A Comprehensive Library of Fluorescent Transcriptional Reporters For Escherichia Coli
    Nature Methods , 3:000042226 (2006)
  • Zatorsky, Naama Geva Zatorsky; Nitzan Rosenfeld; Shalev Itzkovitz; Ron Milo; Alex Sigal; Erez Dekel; Talia Yarnitzky; Yuvalal Liron; Paz Polak; Galit Lahav; Uri Alon
    Oscillations and Variability in the P53 System
    Molecular Systems Biology , 2:000015209 (2006)
  • Shalev Itzkovitz; Uri Alon
    Subgraphs and Network Motifs in Geometric Networks
    Physical Review E , 71:000019705 (2005) [PDF]
  • Shiraz Kalir; Shmoolik Mangan; Uri Alon
    A Coherent Feed-Forward Loop With a Sum Input Function Prolongs Flagella Expression in Escherichia Coli
    Molecular Systems Biology , 1:000020395 (2005) [PDF]
  • Shalev Itzkovitz; R Levitt; N Kashtan; Ron Milo; M Itzkovitz; Uri Alon
    Coarse-Graining and Self-Dissimilarity of Complex Networks
    Physical Review E , 71:000019709 (2005) [PDF]
  • Erez Dekel; Uri Alon
    Optimality and Evolutionary Tuning of the Expression Level of a Protein
    Nature , 436:000010549 (2005) [PDF]
  • Dekel, E; Alon, U
    Optimality and Evolutionary Tuning of the Expression Level of a Protein
    Nature , (2005) [PDF]
  • N Kashtan; Uri Alon
    Spontaneous Evolution of Modularity and Network Motifs
    Proceedings of the National Academy of Sciences of the United States of America , 102:000020856 (2005) [PDF]
  • Erez Dekel; S Mangan; Uri Alon
    Environmental Selection of the Feed-Forward Loop Circuit in Gene-Regulation Networks
    Physical Biology , 2:000010550 (2005) [PDF]
  • N Rosenfeld; JW Young; Uri Alon; PS Swain; MB Elowitz
    Gene Regulation at the Single-Cell Level
    Science , 307:000032805 (2005) [PDF]
  • Noga Friedman; S Vardi; M Ronen; Uri Alon; Joel Stavans
    Precise Temporal Modulation in the Response of the Sos Dna Repair Network in Individual Bacteria
    PLoS Biology , 3:000013976 (2005)
  • Erez Dekel; Uri Alon
    Optimality and Evolutionary Tuning of the Expression Level of a Protein
    Nature , 436:000010549 (2005)
  • Erez Dekel; S Mangan; Uri Alon
    Environmental Selection of the Feed-Forward Loop Circuit in Gene-Regulation Networks
    Physical Biology , 2:000010550 (2005)
  • Shalev Itzkovitz; Uri Alon
    Subgraphs and Network Motifs in Geometric Networks
    Physical Review E , 71:000019705 (2005)
  • N Rosenfeld; JW Young; Uri Alon; PS Swain; MB Elowitz
    Gene Regulation at the Single-Cell Level
    Science , 307:000032805 (2005)
  • Shalev Itzkovitz; R Levitt; N Kashtan; Ron Milo; M Itzkovitz; Uri Alon
    Coarse-Graining and Self-Dissimilarity of Complex Networks
    Physical Review E , 71:000019709 (2005)
  • Noga Friedman; S Vardi; M Ronen; Uri Alon; Joel Stavans
    Precise Temporal Modulation in the Response of the Sos Dna Repair Network in Individual Bacteria
    PLoS Biology , 3:000013976 (2005)
  • Shiraz Kalir; Shmoolik Mangan; Uri Alon
    A Coherent Feed-Forward Loop With a Sum Input Function Prolongs Flagella Expression in Escherichia Coli
    Molecular Systems Biology , 1:000020395 (2005)
  • N Kashtan; Uri Alon
    Spontaneous Evolution of Modularity and Network Motifs
    Proceedings of the National Academy of Sciences of the United States of America , 102:000020856 (2005)
  • N Kashtan; Shalev Itzkovitz; Ron Milo; Uri Alon
    Efficient Sampling Algorithm For Estimating Subgraph Concentrations and Detecting Network Motifs
    Bioinformatics , 20:000020857 (2004) [PDF]
  • Yeger-Lotem, E; Sattath, S; Kashtan, N; Itzkovitz, S; Milo, R; Pinter, RY; Alon, U; Margalit, H
    Network Motifs in Integrated Cellular Networks of Transcription-Regulation and Protein-Protein Interaction
    Proceedings of the National Academy of Sciences of the United States of America , (2004)
  • Shalev Itzkovitz; Ron Milo; N Kashtan; MEJ Newman; Uri Alon
    Reply to &Quot;Comment on 'Subgraphs in Random Networks' &Quot;
    Physical Review E , 70:000019711 (2004)
  • Ron Milo; Shalev Itzkovitz; N Kashtan; R Levitt; S Shen-Orr; I Ayzenshtat; Michal Sheffer; Uri Alon
    Superfamilies of Evolved and Designed Networks
    Science , 303:000027275 (2004) [PDF]
  • N Kashtan; Shalev Itzkovitz; Ron Milo; Uri Alon
    Topological Generalizations of Network Motifs
    Physical Review E , 70:000020858 (2004) [PDF]
  • Ron Milo; Shalev Itzkovitz; N Kashtan; R Levitt; Uri Alon
    Response to Comment on &Quot;Network Motifs: Simple Building Blocks of Complex Networks&Quot; and &Quot;Superfamilies of Evolved and Designed Networks&Quot;
    Science , 305:000027274 (2004)
  • Kalir S, Alon U
    Using a Quantitative Blueprint to Reprogram the Dynamics of the Flagella Gene Network
    Cell , (2004) [PDF]
  • Zaslaver, A; Mayo, AE; Rosenberg, R; Bashkin, P; Sberro, H; Tsalyuk, M; Surette, MG; Alon, U
    Just-in-Time Transcription Program in Metabolic Pathways
    Nature Genetics , (2004) [PDF]

    See features in:

    • Nature Reviews Genetics : [PDF]
    • Journal of Cell Biology : [PDF]
  • G Lahav; N Rosenfeld; A Sigal; Zatorsky, Naama Geva Zatorsky; AJ Levine; MB Elowitz; Uri Alon
    Dynamics of the P53-Mdm2 Feedback Loop in Individual Cells
    Nature Genetics , 36:000023011 (2004) [PDF]
  • G Lahav; N Rosenfeld; A Sigal; Zatorsky, Naama Geva Zatorsky; AJ Levine; MB Elowitz; Uri Alon
    Dynamics of the P53-Mdm2 Feedback Loop in Individual Cells
    Nature Genetics , 36:000023011 (2004)
  • E Yeger-Lotem; S Sattath; N Kashtan; Shalev Itzkovitz; Ron Milo; RY Pinter; Uri Alon; H Margalit
    Network Motifs in Integrated Cellular Networks of Transcription-Regulation and Protein-Protein Interaction
    Proceedings of the National Academy of Sciences of the United States of America , 101:000041603 (2004)
  • Friedman, N; Vardi, S; Ronen, M; Alon, U; Stavans, J
    Precise Modulations in the Sos Dna Repair System Observed in Individual Escherichia Coli Cells.
    Abstracts of Papers of the American Chemical Society , (2004)
  • A Zaslaver; AE Mayo; R Rosenberg; P Bashkin; H Sberro; M Tsalyuk; MG Surette; Uri Alon
    Just-in-Time Transcription Program in Metabolic Pathways
    Nature Genetics , 36:000042229 (2004)
  • Milo, R; Itzkovitz, S; Kashtan, N; Levitt, R; Alon, U
    Response to Comment on &Quot;Network Motifs: Simple Building Blocks of Complex Networks&Quot; and &Quot;Superfamilies of Evolved and Designed Networks&Quot;
    Science , (2004)
  • Ron Milo; Shalev Itzkovitz; N Kashtan; R Levitt; Uri Alon
    Response to Comment on &Quot;Network Motifs: Simple Building Blocks of Complex Networks&Quot; and &Quot;Superfamilies of Evolved and Designed Networks&Quot;
    Science , 305:000027274 (2004)
  • Ron Milo; Shalev Itzkovitz; N Kashtan; R Levitt; S Shen-Orr; I Ayzenshtat; Michal Sheffer; Uri Alon
    Superfamilies of Evolved and Designed Networks
    Science , 303:000027275 (2004)
  • Shalev Itzkovitz; Ron Milo; N Kashtan; MEJ Newman; Uri Alon
    Reply to &Quot;Comment on 'Subgraphs in Random Networks' &Quot;
    Physical Review E , 70:000019711 (2004)
  • N Kashtan; Shalev Itzkovitz; Ron Milo; Uri Alon
    Efficient Sampling Algorithm For Estimating Subgraph Concentrations and Detecting Network Motifs
    Bioinformatics , 20:000020857 (2004)
  • N Kashtan; Shalev Itzkovitz; Ron Milo; Uri Alon
    Topological Generalizations of Network Motifs
    Physical Review E , 70:000020858 (2004)
  • Itzkovitz S, Milo R, Kashtan N, Ziv G, Alon U.
    Subgraphs in Random Networks.
    Phys Rev e Stat Nonlin Soft Matter Phys , (2003) [PDF]
  • S Mangan; Uri Alon
    Structure and Function of the Feed-Forward Loop Network Motif
    Proceedings of the National Academy of Sciences of the United States of America , 100:000025951 (2003) [PDF]
  • S Mangan; A Zaslaver; Uri Alon
    The Coherent Feedforward Loop Serves as a Sign-Sensitive Delay Element in Transcription Networks
    Journal of Molecular Biology , 334:000025953 (2003)
  • N Rosenfeld; Uri Alon
    Response Delays and the Structure of Transcription Networks
    Journal of Molecular Biology , 329:000032802 (2003) [PDF]
  • Yaakov Setty; AE Mayo; MG Surette; Uri Alon
    Detailed Map of a Cis-Regulatory Input Function
    Proceedings of the National Academy of Sciences of the United States of America , 100:000034976 (2003) [PDF]
  • N Rosenfeld; Uri Alon
    Response Delays and the Structure of Transcription Networks
    Journal of Molecular Biology , 329:000032802 (2003)
  • Yaakov Setty; AE Mayo; MG Surette; Uri Alon
    Detailed Map of a Cis-Regulatory Input Function
    Proceedings of the National Academy of Sciences of the United States of America , 100:000034976 (2003)
  • S Mangan; Uri Alon
    Structure and Function of the Feed-Forward Loop Network Motif
    Proceedings of the National Academy of Sciences of the United States of America , 100:000025951 (2003)
  • S Mangan; A Zaslaver; Uri Alon
    The Coherent Feedforward Loop Serves as a Sign-Sensitive Delay Element in Transcription Networks
    Journal of Molecular Biology , 334:000025953 (2003)
  • Shalev Itzkovitz; Ron Milo; N Kashtan; G Ziv; Uri Alon
    Subgraphs in Random Networks
    Physical Review E , 68:000019712 (2003)
  • Uri Alon
    Biological Networks: the Tinkerer as an Engineer
    Science , 301:000002649 (2003) [PDF]
  • A Rikanati; Uri Alon; D Shvarts
    Vortex-Merger Statistical-Mechanics Model For the Late Time Self-Similar Evolution of the Kelvin-Helmholtz Instability
    Physics of Fluids , 15:000032317 (2003)
  • Uri Alon
    Biological Networks: the Tinkerer as an Engineer
    Science , 301:000002649 (2003)
  • A Rikanati; Uri Alon; D Shvarts
    Vortex-Merger Statistical-Mechanics Model For the Late Time Self-Similar Evolution of the Kelvin-Helmholtz Instability
    Physics of Fluids , 15:000032317 (2003)
  • SS Shen-Orr; Ron Milo; S Mangan; Uri Alon
    Network Motifs in the Transcriptional Regulation Network of Escherichia Coli
    Nature Genetics , 31:000035830 (2002) [PDF]
  • Shen-Orr, SS; Milo, R; Mangan, S; Alon, U
    Network Motifs in the Transcriptional Regulation Network of Escherichia Coli
    Nature Genetics , (2002)
  • N Rosenfeld; MB Elowitz; Uri Alon
    Negative Autoregulation Speeds the Response Times of Transcription Networks
    Journal of Molecular Biology , 323:000032803 (2002) [PDF]
  • M Ronen; R Rosenberg; BI Shraiman; Uri Alon
    Assigning Numbers to the Arrows: Parameterizing a Gene Regulation Network by Using Accurate Expression Kinetics
    Proceedings of the National Academy of Sciences of the United States of America , 99:000032680 (2002) [PDF]

    See also JCB news:  [PDF]

  • Ron Milo; S Shen-Orr; Shalev Itzkovitz; N Kashtan; D Chklovskii; Uri Alon
    Network Motifs: Simple Building Blocks of Complex Networks
    Science , 298:000027279 (2002)
  • M Ronen; R Rosenberg; BI Shraiman; Uri Alon
    Assigning Numbers to the Arrows: Parameterizing a Gene Regulation Network by Using Accurate Expression Kinetics
    Proceedings of the National Academy of Sciences of the United States of America , 99:000032680 (2002)
  • N Rosenfeld; MB Elowitz; Uri Alon
    Negative Autoregulation Speeds the Response Times of Transcription Networks
    Journal of Molecular Biology , 323:000032803 (2002)
  • SS Shen-Orr; Ron Milo; S Mangan; Uri Alon
    Network Motifs in the Transcriptional Regulation Network of Escherichia Coli
    Nature Genetics , 31:000035830 (2002)
  • Shiraz Kalir; J McClure; K Pabbaraju; C Southward; M Ronen; S Leibler; MG Surette; Uri Alon
    Ordering Genes in a Flagella Pathway by Analysis of Expression Kinetics From Living Bacteria
    Science , 292:000020396 (2001) [PDF]
  • Notterman DA, Alon U, Sierk AJ, Levine AJ.
    Transcriptional Gene Expression Profiles of Colorectal Adenoma, Adenocarcinoma, and Normal Tissue Examined by Oligonucleotide Arrays
    Cancer Res. , (2001)
  • Shiraz Kalir; J McClure; K Pabbaraju; C Southward; M Ronen; S Leibler; MG Surette; Uri Alon
    Ordering Genes in a Flagella Pathway by Analysis of Expression Kinetics From Living Bacteria
    Science , 292:000020396 (2001)
  • Barkai N, Alon U, Leibler S
    Robust Amplification in Adaptive Signal Transduction Networks
    Comptes Rendus de l'AcadéMie Des Sciences - Series iv - Physics , (2001) [PDF]
  • Dan Oron; Lior Arazi; D Kartoon; A Rikanati; Uri Alon; D Shvarts
    Dimensionality Dependence of the Rayleigh-Taylor and Richtmyer-Meshkov Instability Late-Time Scaling Laws
    Physics of Plasmas , 8:000029400 (2001)
  • Dan Oron; Lior Arazi; D Kartoon; A Rikanati; Uri Alon; D Shvarts
    Dimensionality Dependence of the Rayleigh-Taylor and Richtmyer-Meshkov Instability Late-Time Scaling Laws
    Physics of Plasmas , 8:000029400 (2001)
  • RL Bar-Or; R Maya; LA Segel; Uri Alon; AJ Levine; Moshe Oren
    Generation of Oscillations by the P53-Mdm2 Feedback Loop: a theoretical and Experimental Study
    Proceedings of the National Academy of Sciences of the United States of America , 97:000005029 (2000)
  • RL Bar-Or; R Maya; LA Segel; Uri Alon; AJ Levine; Moshe Oren
    Generation of Oscillations by the P53-Mdm2 Feedback Loop: a theoretical and Experimental Study
    Proceedings of the National Academy of Sciences of the United States of America , 97:000005029 (2000)
  • JF Staropoli; Uri Alon
    Computerized Analysis of Chemotaxis at Different Stages of Bacterial Growth
    Biophysical Journal , 78:000037423 (2000)
  • Rikanati, A.; Oron, D.; Alon, U.; Shvarts, D.
    Statistical Mechanics Merger Model For Hydrodynamic Instabilities
    The Astrophysical Journal Supplement Series , (2000)
  • Sadot O, Erez L, Oron D, Erez G, Ben-Dor G, Alon U, Levin LA, Shvarts D
    Studies on the Nonlinear Evolution of the Richtmyer-Meshkov Instability
    The Astrophysical Journal Supplement Series , (2000)
  • JF Staropoli; Uri Alon
    Computerized Analysis of Chemotaxis at Different Stages of Bacterial Growth
    Biophysical Journal , 78:000037423 (2000)
  • Alon U, Surette MG, Barkai N, Leibler S.
    Robustness in Bacterial Chemotaxis
    Nature , (1999) [PDF]
  • Alon U, Barkai N, Notterman DA, Gish K, Ybarra S, Mack D, Levine AJ.
    Broad Patterns of Gene Expression Revealed by Clustering Analysis of Tumor and Normal Colon Tissues Probed by Oligonucleotide Arrays.
    Proc Natl Acad Sci u s a , (1999) [PDF]
  • Oron D, Sadot O, Srebro Y, Rikanati A, Yedvab Y, Alon U, Erez L, Erez G, Ben-Dor G, Levin LA, Ofer D, Shvarts D
    Studies in the Nonlinear Evolution of the Rayleigh–Taylor and Richtmyer–Meshkov Instabilities and their Role in Inertial Confinement Fusion
    Laser and Particle Beams , (1999)
  • Uri Alon; MR Evans; H Hinrichsen; David Mukamel
    Smooth Phases, Roughening Transitions, and Novel Exponents in One-Dimensional Growth Models
    Physical Review E , 57:000002658 (1998)
  • Alon U, Camarena L, Surette M G, Aguera y Arcas B, Liu Y, Leibler S, and Stock J B
    Response Regulator Output in Bacterial Chemotaxis.
    Embo j , (1998)
  • Uri Alon; MR Evans; H Hinrichsen; David Mukamel
    Smooth Phases, Roughening Transitions, and Novel Exponents in One-Dimensional Growth Models
    Physical Review E , 57:000002658 (1998)
  • Rikanati, A.; Alon, U.; Shvarts, D.
    Vortex Model For the Nonlinear Evolution of the Multimode Richtmyer-Meshkov Instability at Low Atwood Numbers
    Phys. Rev. e , (1998)
  • Sadot D, Alon U, Shvarts D
    Scaling Laws of the Rayleigh–Taylor Ablation Front Mixing Zone Evolution in Inertial Confinement Fusion
    Physics of Plasmas , (1998)
  • Sadot O, Erez L, Alon U, Oron O, Levin LA, Erez G, Ben-Dor G, Shvarts D
    Study of Nonlinear Evolution of Single-Mode and Two-Bubble Interaction Under Richtmyer-Meshkov Instability
    Phys. Rev. Lett. , (1998)
  • Uri Alon; David Mukamel
    Gel Electrophoresis and Diffusion of Ring-Shaped DNA
    Physical Review E , 55:000002660 (1997)
  • Uri Alon; David Mukamel
    Gel Electrophoresis and Diffusion of Ring-Shaped DNA
    Physical Review E , 55:000002660 (1997)
  • Uri Alon; MR Evans; H Hinrichsen; David Mukamel
    Roughening Transition in a One-Dimensional Growth Process
    Physical Review Letters , 76:000002657 (1996)
  • D Ofer; Uri Alon; D Shvarts; RL McCrory; CP Verdon
    Modal Model For the Nonlinear Multimode Rayleigh-Taylor Instability
    Physics of Plasmas , 3:000029072 (1996)
  • Uri Alon; MR Evans; H Hinrichsen; David Mukamel
    Roughening Transition in a One-Dimensional Growth Process
    Physical Review Letters , 76:000002657 (1996)
  • D Ofer; Uri Alon; D Shvarts; RL McCrory; CP Verdon
    Modal Model For the Nonlinear Multimode Rayleigh-Taylor Instability
    Physics of Plasmas , 3:000029072 (1996)
  • Hecht J, Ofer D, Alon U, Shvarts D, Orszag SA, McCrory RL
    Three-Dimensional Simulations and Analysis of the Nonlinear Stage of the Rayleigh-Taylor Instability
    Laser and Particle Beams , (1995)
  • Shvarts D, Alon U, Ofer D, McCrory RL, Verdon CP
    Nonlinear Evolution of Multimode Rayleigh–Taylor Instability in Two and Three Dimensions
    Physics of Plasmas , (1995)
  • Alon U, Hecht J, Ofer D, Shvarts D
    Power Laws and Similarity of Rayleigh-Taylor and Richtmyer-Meshkov Mixing Fronts at All Density Ratios
    Phys. Rev. Lett. , (1995)
  • D SHVARTS; Uri Alon; D OFER; RL MCCRORY; CP VERDON
    Nonlinear Evolution of Multimode Rayleigh-Taylor Instability in 2 and 3 Dimensions
    , :000036391 (1995)
  • Jacob Hecht J, Alon U, Shvarts D
    Potential Flow Models of Rayleigh–Taylor and Richtmyer–Meshkov Bubble Fronts
    Physics of Fluids , (1994)
  • Alon U, Hecht J, Mukamel D, Shvarts D
    Scale Invariant Mixing Rates of Hydrodynamically Unstable Interfaces
    Physical Review Letters , (1994)
  • Uri Alon; J HECHT; David Mukamel; D SHVARTS
    Scale-Invariant Mixing Rates of Hydrodynamically Unstable Interfaces
    Physical Review Letters , 72:000002659 (1994)
  • J HECHT; Uri Alon; D SHVARTS
    Potential Flow Models of Rayleigh-Taylor and Richtmyer-Meshkov Bubble Fronts
    Physics of Fluids , 6:000018357 (1994)
  • Uri Alon; J HECHT; David Mukamel; D SHVARTS
    Scale-Invariant Mixing Rates of Hydrodynamically Unstable Interfaces
    Physical Review Letters , 72:000002659 (1994)
  • J HECHT; Uri Alon; D SHVARTS
    Potential Flow Models of Rayleigh-Taylor and Richtmyer-Meshkov Bubble Fronts
    Physics of Fluids , 6:000018357 (1994)
  • Alon U, Shvarts D, Mukamel D
    Scale Invariant Regime in Rayleigh-Taylor Bubble Front Dynamics
    Phys. Rev. e , (1993)
  • Uri Alon; D SHVARTS; David Mukamel
    Scale-Invariant Regime in Rayleigh-Taylor Bubble-Front Dynamics
    Physical Review E , 48:000002661 (1993)
  • Uri Alon; D SHVARTS; David Mukamel
    Scale-Invariant Regime in Rayleigh-Taylor Bubble-Front Dynamics
    Physical Review E , 48:000002661 (1993)
  • Drory A, Balberg I, Alon U, Berkowitz B
    Analytic Derivation of Percolation Thresholds in Anisotropic Systems of Permeable Objects
    Physical Review A , (1991)
  • U Alon U, Balberg I, Drory A
    New, Heuristic, Percolation Criterion For Continuum Systems
    Phys. Rev. Lett. , (1991)
  • Alon U, Drory A, Balberg I
    Systematic Derivation of Percolation Thresholds in Continuum Systems
    Phys. Rev. a , (1990)
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