Evolution
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Evolutionary Trade-Offs and the Structure of Polymorphisms
Effects of common genetic variations are predicted to push phenotypes along optimal tradeoffs.
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Evolutionary Tradeoffs, Pareto Optimality and the Morphology of Ammonite Shells
Editors Pick BMC Systems Biology:
Across ammonite genera, trade-offs between different shape phenotypes resulted in a small range of successful forms, that could be represented by a pyramid in the diagram of possible shape parameters, with each point representing an optimized archetype.
BMC Systems Biology 2015, 9:12"
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Evolution of Bow-Tie Architectures in Biology
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Geometry of the Gene Expression Space of Individual Cells
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The Mass-Longevity Triangle: Pareto Optimality and the Geometry of Life-History Trait Space.
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Inferring Biological Tasks Using Pareto Analysis of High-Dimensional Data
For accessing the package: click here
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The Geometry of the Pareto Front in Biological Phenotype Space
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Mutation Rules and the Evolution of Sparseness and Modularity in Biological Systems
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Evolutionary Tradeoffs Between Economy and Effectiveness in Biological Homeostasis Systems
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Developmental Bias in the Evolution of Phalanges
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Evolutionary Trade-Offs, Pareto Optimality, and the Geometry of Phenotype Space
- See also Science Perspective: [PDF]
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Evolutionary Balancing of Fitness-Limiting Factors
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An Analytically Solvable Model For Rapid Evolution of Modular Structure
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Extinctions in Heterogeneous Environments and the Evolution of Modularity
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Facilitated Variation: How Evolution Learns From Past Environments to Generalize to New Environments
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Defined Order of Evolutionary Adaptations: Experimental Evidence.
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The Genetic Code is Nearly Optimal For Allowing Additional Information Within Protein-Coding Sequences
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Varying Environments Can Speed up Evolution
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Environmental Variability and Modularity of Bacterial Metabolic Networks
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Cost-Benefit theory and Optimal Design of Gene Regulation Functions
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Coding Limits on the Number of Transcription Factors
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Plasticity of the Cis-Regulatory Input Function of a Gene
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Optimality and Evolutionary Tuning of the Expression Level of a Protein
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Optimality and Evolutionary Tuning of the Expression Level of a Protein
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Spontaneous Evolution of Modularity and Network Motifs
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Environmental Selection of the Feed-Forward Loop Circuit in Gene-Regulation Networks