Dr. Nir Friedman's Lab

Biology

1. I. Zaretsky*, M. Polonsky*, E. Shifrut, S. Reich-Zeliger, YE. Antebi, G. Aidelberg, N. Waysbort, N. Friedman. Monitoring the dynamics of primary T cell activation and differentiation using long term live cell imaging in microwell arrays. Lab Chip. 2012 Oct 17. [Epub ahead of print]

2. W. Ndifon*, H. Gal*, E. Shifrut, R. Aharoni, N. Yissachar, N. Waysbort, S. Reich-Zeliger, R. Arnon, N. Friedman. Chromatin conformation governs T-cell receptor Jβ gene segment usage. Proc Natl Acad Sci U S A. 2012 Sep 25;109(39):15865-70.

3. Y. Savir*, N. Waysbort*, YE. Antebi, T. Tlusty, N. Friedman. Balancing speed and accuracy of polyclonal T cell activation: a role for extracellular feedback. BMC Syst Biol. 2012 Aug 27;6(1):111

4. Y. Hart, YE. Antebi, AE. Mayo, N. Friedman, & U. Alon. Design principles of cell circuits with paradoxical components. Proceedings of the National Academy of Sciences 2012, 1-6 (2012).
    
5. R. Aharoni, R. Eilam, A. Stock, A. Vainshtein, E. Shezen, H. Gal, N. Friedman, and R. Arnon, "Glatiramer acetate reduces Th-17 inflammation and induces regulatory T-cells in the CNS of mice with relapsing-remitting or chronic EAE", J. Neuroimmunology, 225, 100 (2010).
    
6. N. Friedman¹, L. Cai, and X. S. Xie " Stochasticity in Gene Expression as Observed by Single-molecule Experiments in Live Cells", Isr. J. Chem, 49, 333 (2009).
    
7. N. Friedman, L. Cai, and X. S. Xie. "Linking stochastic dynamics to population distribution: an analytical framework of gene expression", Phys. Rev. Lett., 97, 168302 (2006).
    
8. L. Cai*, N. Friedman* and X. S. Xie. "Stochastic protein expression in individual cells with single molecule sensitivity", Nature, 440, 358 (2006).
    
9. N. Friedman*, S. Vardi*, M. Ronen, U. Alon, and J. Stavans. "Precise Temporal Modulation in the Response of the SOS DNA Repair Network in Individual Bacteria", PloS Biol., 3, e238 (2005).
    
10. O. Kobiler*, A. Rokney*, N. Friedman, D. L. Court, J. Stavans, and A. B. Oppenheim, "Quantitative kinetic analysis of the bacteriophage lambda genetic network", Proc. Natl. Acad. Sci. USA., 102, 4470 (2005).
     
11. D. Sagi*, N. Friedman*, C. Vorgias, A. B. Oppenheim, and J. Stavans, "Modulation of DNA conformations through the formation of alternative high-order HU-DNA complexes", J. Mol. Biol., 341, 419 (2004).

    (* denotes equal contribution)

Physics

1. N. Friedman, A. Kaplan, and N. Davidson, "Dark optical traps for cold atoms", in Advances in atomic molecular and optical physics, 48, 99 (2002). (B. Bederson, and H. Walther, Eds., Academic Press).
    
2. A. Kaplan, N. Friedman, and N. Davidson, "Optimized single-beam dark optical trap", J. Opt. Soc. Am. B, 19, 1233 (2002).
    
3. A. Kaplan, N. Friedman, M. Andersen, and N. Davidson. "Observation of islands of stability in soft-wall atom-optics billiards", Phys. Rev. Lett., 87, 274101 (2001).
    
4. N. Friedman, A. Kaplan, D. Carasso, and N. Davidson. "Observation of chaotic and regular dynamics in atom-optics billiards", Phys. Rev. Lett., 86, 1518 (2001).
    
5. A. Kaplan, N. Friedman, and N. Davidson. "An acousto-optic lens with very fast focus scanning", Opt. Lett. 26, 1078 (2001).
    
6. N. Friedman, A. Kaplan, and N. Davidson. "An acousto-optic scanning system with very fast non-linear scans", Opt. Lett., 25, 1762 (2000).
    
7. N. Friedman, L. Khaykovich, R. Ozeri, and N. Davidson. "Compression of cold atoms to very high densities in a novel rotating-beam blue-detuned optical dipole trap", Phys. Rev. A, 61, 031403(R) (2000).

    

8. N. Friedman, A. Eyal and M. Tur, "The use of principal states of polarization to describe tunability in a fiber laser", IEEE J. of Quant. Elect. 33, 642 (1997).