PUBLICATIONS

  1. Yona AH, Bloom-Ackerman Z, Frumkin1 I, Hanson-Smith V, Charpak-Amikam Y, Feng Q, Boeke JD, Dahan O, Pilpel Y. tRNA Genes Rapidly Change in Evolution to Meet Novel Translational Demands eLife Dec 20;2:e01339 (2013)

  2. Agmon N, Liefshitz B, Zimmer C, Fabre E, Kupiec M. Effect of nuclear architecture on the efficiency of double-strand break repair. Nat Cell Biol. Jun;15(6):694-9. (2013)

  3. Tkačik G, Granot-Atedgi E, Segev R, Schneidman E. Retinal metric: a stimulus distance measure derived from population neural responses. Phys Rev Lett.;110(5):058104. (2013)

  4. Pelechano V, Wei W, Steinmetz LM. Extensive transcriptional heterogeneity revealed by isoform profiling. Nature. 497(7447):127-31(2013)

  5. Wilkening S, Pelechano V, Järvelin AI, Tekkedil MM, Anders S, Benes V, Steinmetz LM. An efficient method for genome-wide polyadenylation site mapping and RNAquantification. Nucleic Acids Res 41(5):e65. (2013)

  6. Delhomme N, Padioleau I, Furlong EE, Steinmetz LM. easyRNASeq: a bioconductor package for processing RNA-Seq data. Bioinformatics. 28(19):2532-3. (2012)

  7. Ben-Shitrit T, Yosef N, Shemesh K, Sharan R, Ruppin E, Kupiec M. Systematic identification of gene annotation errors in the widely used yeast mutation collections. Nat Methods. 2012

  8. Tandem fluorescent protein timers for in vivo analysis of protein dynamics. Khmelinskii, A.,
    Philipp J Keller, PJ, Bartosik, A., Meurer, M., Barry, JD, Mardin, BR, Kaufmann, A. Trautmann,
    A., Wachsmuth, M., Pereira, G., Huber, W., Schiebel, E. & Knop, M. Nat. Biotechnol. 30, 708-
    714. (2012).

  9. Obolski, U. and Hadany, L. Stress-induced genetic variation and its implications for choosing antibiotic treatment strategies.BMC Medicine, 10:89, 2012

  10. Berman, J. and Hadany*, L. Does stress drive (para)sex? Implications for C. albicans evolution Trends in Genetics, 28, 197-203, 2012

  11. Ram, Y. and Hadany, L. The Evolution of Stress-Induced Hypermutation in Bacteria. Evolution, 66, 2315-2328, 2012.

  12. Cohen Y, Schneidman E. High-order feature-based mixture models of classification learning predict individual learning curves and enable personalized teaching. Proc Natl Acad Sci U S A. 110(2):684-9 (2012)

  13. Yona AH, Manor S, Romano GH, Herbst RH, Mitchell A, Kupiec M, Pilpel Y, Dahan O. Chromosomal duplication is a short-term evolutionary strategy which is replaced by refined and more sustainable solutions. PNAS 109(51):21010-5 (2012)

  14. Harari Y, Rubinstein L, Kupiec M. An anti-checkpoint activity for rif1. PLoS Genet. 2011 Dec;7(12):e1002421. doi: 10.1371/journal.pgen.1002421. Epub 2011 Dec 15.

  15. Capoulade J., Wachsmuth M., Hufnagel, L. Knop, M. Quantitative fluorescnce imaging of protein diffusion and interaction in living cells. Nat Biotechnol. 29, 835-839 (2011)

  16. Ungar L, Harari Y, Toren A, Kupiec M. Tor complex 1 controls telomere length by affecting the level of Ku Curr Biol. 21(24):2115-20 (2011)

  17. Rechavi, O., Minevich, G., and Hobert, O. Transgenerational inheritance of an acquired small RNA-based antiviral response in C.elegans. Cell. 147, 1248–1256. (2011)

  18. Shklarsh A, Ariel G, Schneidman E, Ben-Jacob E. Smart swarms of bacteria-inspired agents
    with performance adaptable interactions. PLoS Comput Biol. 7(9):e1002177 (2011)

  19. Ganmor E, Segev R, Schneidman E. Sparse low-order interaction network underlies a highly correlated and learnable neural population code. Proc Natl Acad Sci U S A. 108(23):9679-84(2011)

  20. Mitchell A., & Pilpel Y. A mathematical model for microbial conditioning Proc Natl Acad Sci U S A 108(17):7271-6 (2011)

  21. Nishant, K.T., Wei, W., Mancera, E., Argueso, J.L., Schlattl, A., Delhomme, N., Ma, X.,Bustamante, C.D., Korbel, J.O., Gu, Z., Steinmetz, L.M. & Alani, E. The baker's yeast diploid genome is remarkably stable in vegetative growth and meiosis PLoS Genet. 2010 Sep 9;6(9). pii: e1001109

  22. Segregation of yeast nuclear pores. Khmelinskii, A., Keller, P.J., Lorenz, H., Schiebel, E. &Knop, M. Nature. 2010 Jul 22;466(7305):E1.

  23. Rechavi, O., Kalman, M., Fang, Y., Vernitsky, H., Jacob-Hirsch, J., Foster, L. J., Kloog, Y., and Goldstein, I. Trans-SILAC: sorting out the non-cellautonomous proteome. Nature Methods. 7:923-927. (2010)

  24. Mitchell A, Romano G, Groisman B, Yona A, Dekel E, Kupiec M, Dekel E Dahan O, & Pilpel Y. Adaptive Prediction of Environmental Changes by Micro-Organisms. Nature 460:220-4 (2009)