Collection of complex networks
Convention used: the files give a list of the edges in the network. The first column is the source of the edge (e.g. regulating gene), the second column is the target of the edge (e.g. regulated gene).
E. coli transcription networks - coli1_1Inter_st.txt , coliNodesDictionary.txt, more info and link to image of network,
links to regulonDB site: Main-Page, and Public Datasets.
[Older version and more data: Version 1.0 (As published Shen-Orr et. al, Nature Gen. 2002), Version 1.1 (As published Mangan et. al. PNAS 2003)]
B. subtilis transcription network - based on dbtbs.hgc.jp
C. elegans - neuronal synaptic circuitry network see: http://www.wormatlas.org/neuronsandcircuits.html
WWW - available at http://www3.nd.edu/~networks/resources.htm
Internet - at the level of autonomous systems available at http://www.cosinproject.org/