Publications

Schuldiner M. & Zalckvar E. (2017). Incredibly close-A newly identified peroxisome-ER contact site in humans. Journal of Cell Biology, Vol: 216, Page: 287-289

Bar-Yaacov D., Mordret E., Towers R., Biniashvili T., Soyris C., Schwartz S., Dahan O. & Pilpel Y. (2017). RNA editing in bacteria recodes multiple proteins and regulates an evolutionarily conserved toxin-antitoxin system. Genome Research, Vol: 27, Page: 1696-1703

Mitsunaga S., Odajima J., Yawata S., Shioda K., Owa C., Isselbacher K. J., Shioda T. & Hanna J. (. (2017). Relevance of iPSC-derived human PGC-like cells at the surface of embryoid bodies to prechemotaxis migrating PGCs. Proceedings Of The National Academy Of Sciences Of The United States Of America-Physical Sciences, Vol: 114, Page: E9913-E9922

Lotem J. & Groner Y. (2017). The Leo Sachs legacy: A pioneers journey through hematopoiesis. International Journal of Developmental Biology, Vol: 61, Page: 127-136

Hasson P., Volk T. & Salzberg A. (2017). Building functional units of movement-generation and movement-sensation in the embryo. International Journal of Developmental Biology, Vol: 61, Page: 171-178

Zhou F., Liu Y., Rohde C., Pauli C., Gerloff D., Koehn M., Misiak D., Baeumer N., Cui C., Goellner S., Oellerich T., Serve H., Garcia-Cuellar M., Slany R., Maciejewski J. P., Przychodzen B., Seliger B., Klein H., Bartenhagen C., Berdel W. E., Dugas M., Taketo M. M., Farouq D., Schwartz S., Regev A., Hebert J., Sauvageau G., Pabst C., Huettelmaier S. & Mueller-Tidow C. (2017). AML1-ETO requires enhanced C/D box snoRNA/RNP formation to induce self-renewal and leukaemia. Nature Cell Biology, Vol: 19, Page: 844-855

Schwartz S. & Motorin Y. (2017). Next-generation sequencing technologies for detection of modified nucleotides in RNAs. RNA Biology, Vol: 14, Page: 1124-1137

Schuldiner M. & Bohnert M. (2017). A different kind of love - lipid droplet contact sites. Biochimica Et Biophysica Acta-Molecular And Cell Biology Of Lipids, Vol: 1862, Page: 1188-1196

Lotem J., Levanon D., Negreanu V., Bauer O., Hantisteanu S., Dicken J. & Groner Y. (2017). Runx3 in Immunity, Inflammation and Cancer. , Page: 369-393

Rivkin N., Chapnik E., Mildner A., Barshtein G., Porat Z., Kartvelishvily E., Dadosh T., Birger Y., Amir G., Yedgar S., Izraeli S., Jung S. & Hornstein E. (2017). Erythrocyte survival is controlled by microRNA-142. Haematologica, Vol: 102, Page: 676-685

Palmer B. A., Taylor G. J., Brumfeld V., Gur D., Shemesh M., Elad N., Osherov A., Oron D., Weiner S. & Addadi L. (2017). The image-forming mirror in the eye of the scallop. Science, Vol: 358, Page: 1172-1175

Gur D., Palmer B. A., Weiner S. & Addadi L. (2017). Light Manipulation by Guanine Crystals in Organisms: Biogenic Scatterers, Mirrors, Multilayer Reflectors and Photonic Crystals. Advanced Functional Materials, Vol: 27

Bennet M., Gur D., Yoon J., Park Y. K. & Faivre D. (2017). A Bacteria-Based Remotely Tunable Photonic Device. Advanced Optical Materials, Vol: 5

Ke S., Pandya-Jones A., Saito Y., Fak J. J., Vagbo C. B., Geula S., Hanna J. H., Black D. L., Darnell J. E. & Darnell R. B. (2017). m⁶A mRNA modifications are deposited in nascent pre-mRNA and are not required for splicing but do specify cytoplasmic turnover. GENES & DEVELOPMENT, Vol: 31, Page: 990-1006

Erez Z., Steinberger-Levy I., Shamir M., Doron S., Stokar Avihail A. A., Peleg Y., Melamed S., Leavitt A., Savidor A., Albeck S., Amitai G. & Sorek R. (2017). Communication between viruses guides lysis-lysogeny decisions. Nature, Vol: 541, Page: 488-493

Rappaport N., Twik M., Plaschkes I., Nudel R., Stein T. I., Levitt J., Gershoni M., Morrey C. P., Safran M. & Lancet D. (2017). MalaCards: an amalgamated human disease compendium with diverse clinical and genetic annotation and structured search. Nucleic Acids Research, Vol: 45, Page: D877-D887

Felsenthal N. & Zelzer E. (2017). Mechanical regulation of musculoskeletal system development. Development (Cambridge), Vol: 144, Page: 4271-4283

Safra M., Nir R., Farouq D., Slutzkin I. V. & Schwartz S. (2017). TRUB1 is the predominant pseudouridine synthase acting on mammalian mRNA via a predictable and conserved code. Genome Research, Vol: 27, Page: 393-406

Rappaport N., Fishilevich S., Nudel R., Twik M., Belinky F., Plaschkes I., Stein T. I., Cohen D., Oz Levi L. D., Safran M. & Lancet D. (2017). Rational confederation of genes and diseases: NGS interpretation via GeneCards, MalaCards and VarElect. BioMedical Engineering Online, Vol: 16

Dasari S. K., Schejter E., Bialik S., Shkedy A., Levin-Salomon V., Levin-Zaidman S. & Kimchi A. (2017). Death by over-eating: The Gaucher disease associated gene GBA1, identified in a screen for mediators of autophagic cell death, is necessary for developmental cell death in Drosophila midgut. Cell Cycle, Vol: 16, Page: 2003-2010

Safra M., Sas-Chen A., Nir R., Winkler R., Nachshon A., Bar-Yaacov D., Erlacher M., Rossmanith W., Stern-Ginossar N. & Schwartz S. (2017). The m(1)A landscape on cytosolic and mitochondrial mRNA at single-base resolution. Nature, Vol: 551, Page: 251-255

Herbst R. H., Bar-Zvi D., Reikhav S., Soifer I., Breker M., Jona G., Shimoni E., Schuldiner M., Levy A. A. & Barkai N. (2017). Heterosis as a consequence of regulatory incompatibility. BMC Biology, Vol: 15

Antebi Y. E., Linton J. M., Klumpe H., Bintu B., Gong M., Su C., McCardell R. & Elowitz M. B. (2017). Combinatorial Signal Perception in the BMP Pathway. Cell, Vol: 170, Page: 1184-1196.e24

Antebi Y. E., Nandagopal N. & Elowitz M. B. (2017). An operational view of intercellular signaling pathways. Current Opinion in Systems Biology, Vol: 1, Page: 16-24

Yaakov G., Lerner D., Bentele K., Steinberger J. & Barkai N. (2017). Coupling phenotypic persistence to DNA damage increases genetic diversity in severe stress. Nature Ecology and Evolution, Vol: 1

Alkelai A., Olender T., Dode C., Shushan S., Tatarskyy P., Furman-Haran E., Boyko V., Gross-Isseroff R., Halvorsen M., Greenbaum L., Milgrom R., Yamada K., Haneishi A., Blau I. & Lancet D. (2017). Next-generation sequencing of patients with congenital anosmia. European Journal of Human Genetics, Vol: 25, Page: 1377-1387

Aviram N. & Schuldiner M. (2017). Targeting and translocation of proteins to the endoplasmic reticulum at a glance. Journal of Cell Science, Vol: 130, Page: 4079-4085

Safra M., Nir R., Farouq D., Vainberg Slutskin I. & Schwartz S. (2017). Corrigendum: TRUB1 is the predominant pseudouridine synthase acting on mammalian mRNA via a predictable and conserved code. Genome Research, Vol: 27, Page: 1460

Gurvich Y., Leshkowitz D. & Barkai N. (2017). Dual role of starvation signaling in promoting growth and recovery. PLoS Biology, Vol: 15

Fainsod A., Leibovich A., Leibovich-Kot H., Ben-Zvi D. & Barkai N. (2017). Expansion-restriction of Spemann's organizer by an ADMP self-regulatory switch to scale the BMP gradient. Mechanisms of Development, Vol: 145, Page: S76-S76

Yofe I., Soliman K., Chuartzman S. G., Morgan B., Weill U., Yifrach E., Dick T. P., Cooper S. J., Ejsing C. S., Schuldiner M., Zalckvar E. & Thoms S. (2017). Pex35 is a regulator of peroxisome abundance. Journal of Cell Science, Vol: 130, Page: 791-804

Glasner A., Isaacson B., Viukov S., Neuman T., Friedman N., Mandelboim M., Sexl V., Hanna J. H. & Mandelboim O. (2017). Increased NK cell immunity in a transgenic mouse model of NKp46 overexpression. Scientific Reports, Vol: 7

Haimovich G., Ecker C. M., Dunagin M. C., Eggan E., Raj A., Gerst J. E. & Singer R. H. (2017). Intercellular mRNA trafficking via membrane nanotube-like extensions in mammalian cells. Proceedings Of The National Academy Of Sciences Of The United States Of America-Physical Sciences, Vol: 114, Page: E9873-E9882

Eisenberg-Bord M. & Schuldiner M. (2017). Mitochatting - If only we could be a fly on the cell wall. Biochimica et Biophysica Acta - Molecular Cell Research, Vol: 1864, Page: 1469-1480

Dar D. & Sorek R. (2017). Regulation of antibiotic-resistance by non-coding RNAs in bacteria. Current Opinion in Microbiology, Vol: 36, Page: 111-117

Kruzel-Davila E., Shemer R., Ofir A., Bavli-Kertselli I., Darlyuk-Saadon I., Oren-Giladi P., Wasser W. G., Magen D., Zaknoun E., Schuldiner M., Salzberg A., Kornitzer D., Marelja Z., Simons M. & Skorecki K. (2017). APOL1-Mediated Cell Injury Involves Disruption of Conserved Trafficking Processes. Journal Of The American Society Of Nephrology, Vol: 28, Page: 1117-1130

White K., Arama E. & Hardwick J. M. (2017). Controlling caspase activity in life and death. PLoS Genetics, Vol: 13

Ofir G. & Sorek R. (2017). Vesicles Spread Susceptibility to Phages. Cell, Vol: 168, Page: 13-15

Frumkin I., Schirman D., Rotman A., Li F., Zahavi L., Mordret E., Asraf O., Wu S., Levy S. F. & Pilpel Y. (2017). Gene Architectures that Minimize Cost of Gene Expression. Molecular Cell, Vol: 65, Page: 142-153

Hirsch A., Palmer B. A., Elad N., Gur D., Weiner S., Addadi L., Kronik L. & Leiserowitz L. (2017). Biologically Controlled Morphology and Twinning in Guanine Crystals. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, Vol: 56, Page: 9420-9424

Gispan A., Carmi M. & Barkai N. (2017). Model-based analysis of DNA replication profiles: predicting replication fork velocity and initiation rate by profiling free-cycling cells. Genome Research, Vol: 27, Page: 310-319

Shilo B. & Barkai N. (2017). Lighting Up ERK Activity. Developmental Cell, Vol: 40, Page: 115-116

Toth B., Ben-Moshe S., Gavish A., Barkai N. & Itzkovitz S. (2017). Early commitment and robust differentiation in colonic crypts. Molecular Systems Biology, Vol: 13

Shilo B. & Barkai N. (2017). Buffering Global Variability of Morphogen Gradients. Developmental Cell, Vol: 40, Page: 429-438

Rivkin N., Chapnik E., Birger Y., Yanowski E., Curato C., Mildner A., Porat Z., Amir G., Izraeli S., Jung S. & Hornstein E. (2017). Rac1 functions downstream of miR-142 in regulation of erythropoiesis. Haematologica, Vol: 102, Page: 476-480

Sheinboim D., Maza I., Dror I., Parikh S., Krupalnik V., Bell R. E., Zviran A., Suita Y., Hakim O., Mandel-Gutfreund Y., Khaled M., Hanna J. H. & Levy C. (2017). OCT4 impedes cell fate redirection by the melanocyte lineage master regulator MITF in mouse ESCs. Nature Communications, Vol: 8

Hassdenteufel S., Sicking M., Schorr S., Aviram N., Fecher-Trost C., Schuldiner M., Jung M., Zimmermann R. & Lang S. (2017). hSnd2 protein represents an alternative targeting factor to the endoplasmic reticulum in human cells. FEBS Letters, Vol: 591, Page: 3211-3224

Solomon O., Di Segni A., Cesarkas K., Porath H. T., Marcu-Malina V., Mizrahi O., Stern-Ginossar N., Kol N., Farage-Barhom S., Glick-Saar E., Lerenthal Y., Levanon E. Y., Amariglio N., Unger R., Goldstein I., Eyal E. & Rechavi G. (2017). RNA editing by ADAR1 leads to context-dependent transcriptome-wide changes in RNA secondary structure. Nature Communications, Vol: 8

Chai C., Rivkin M., Berkovits L., Simerzin A., Zorde-Khvalevsky E., Rosenberg N., Klein S., Yaish D., Durst R., Shpitzen S., Udi S., Tam J., Heeren J., Worthmann A., Schramm C., Kluwe J., Ravid R., Hornstein E., Giladi H. & Galun E. (2017). Metabolic Circuit Involving Free Fatty Acids, microRNA 122, and Triglyceride Synthesis in Liver and Muscle Tissues. Gastroenterology, Vol: 153, Page: 1404-1415

Neugebauer M., Bocker J., Matern J., Pietrokovski S. & Mootz H. (2017). Development of a screening system for inteins active in protein splicing based on intein insertion into the LacZ alpha-peptide. Biological Chemistry, Vol: 398, Page: 57-67

Herzig Y., Nevo S., Bornstein C., Brezis M. R., Ben-Hur S., Shkedy A., Eisenberg-Bord M., Levi B., Delacher M., Goldfarb Y., David E., Weinberger L., Viukov S., Ben-Dor S., Giraud M., Hanna J. H., Breiling A., Lyko F., Amit I., Feuerer M. & Abramson J. (2017). Transcriptional programs that control expression of the autoimmune regulator gene Aire. Nature Immunology, Vol: 18, Page: 161-172

Towbin B. D., Korem Y., Bren A., Doron S., Sorek R. & Alon U. (2017). Optimality and sub-optimality in a bacterial growth law. Nature Communications, Vol: 8

Shanzer M., Adler J., Ricardo Lax L. I., Reuven N. & Shaul Y. (2017). The nonreceptor tyrosine kinase c-Src attenuates SCF(β-TrCP) E3-ligase activity abrogating Taz proteasomal degradation. Proceedings of the National Academy of Sciences of the United States of America, Vol: 114, Page: 1678-1683

Eapen V. V., Waterman D. P., Bernard A., Schiffmann N., Sayas E., Kamber R., Lemos B., Memisoglu G., Ang J., Mazella A., Chuartzman S. G., Loewith R. J., Schuldiner M., Denic V., Klionsky D. J. & Haber J. E. (2017). A pathway of targeted autophagy is induced by DNA damage in budding yeast. Proceedings of the National Academy of Sciences - PNAS, Vol: 114, Page: E1158-E1167

Eisenberg-Bord M. & Schuldiner M. (2017). Ground control to major TOM: mitochondrianucleus communication. FEBS Journal, Vol: 284, Page: 196-210

Gershoni M. & Pietrokovski S. (2017). The landscape of sex-differential transcriptome and its consequent selection in human adults. BMC Biology, Vol: 15

Mandolesi G., De Vito F., Musella A., Gentile A., Bullitta S., Fresegna D., Sepman H., Di Sanza C., Haji N., Mori F., Buttari F., Perlas E., Ciotti M. T., Hornstein E., Bozzoni I., Presutti C. & Centonze D. (2017). MiR-142-3p is a key regulator of IL-1β-dependent synaptopathy in neuroinflammation. Journal of Neuroscience, Vol: 37, Page: 546-561

Lebesgue N., Megyeri M., Cristobal A., Scholten A., Chuartzman S. G., Voichek Y., Scheltema R. A., Mohammed S., Futerman A. H., Schuldiner M., Heck A. J. R. & Lemeer S. (2017). Combining Deep Sequencing, Proteomics, Phosphoproteomics, and Functional Screens to Discover Novel Regulators of Sphingolipid Homeostasis. Journal of Proteome Research, Vol: 16, Page: 571-582

Rotem N., Magen I., Ionescu A., Gershoni Emek E. N., Altman T., Costa C. J., Gradus T., Pasmanik-Chor M., Willis D. E., Ben-Dov I. Z., Hornstein E. & Perlson E. (2017). ALS along the Axons - Expression of coding and noncoding RNA differs in axons of ALS models. Scientific Reports, Vol: 7

Hay-Koren A., Bialik S., Levin-Salomon V. & Kimchi A. (2017). Changes in cIAP2, survivin and BimEL expression characterize the switch from autophagy to apoptosis in prolonged starvation. Journal of Internal Medicine, Vol: 281, Page: 458-470

Itkin T., Kumari A., Schneider E., Gur-Cohen S., Ludwig C., Brooks R., Kollet O., Golan K., Khatib-Massalha E., Russo C. M., Chisholm J. D., Rouhi A., Geiger H., Hornstein E., Kerr W. G., Kuchenbauer F. & Lapidot T. (2017). MicroRNA-155 promotes G-CSF-induced mobilization of murine hematopoietic stem and progenitor cells via propagation of CXCL12 signaling. Leukemia, Vol: 31, Page: 1247-1250

Gorelik A., Sapir T., Haffner-Krausz R., Olender T., Woodruff T. M. & Reiner O. (2017). Developmental activities of the complement pathway in migrating neurons. Nature Communications, Vol: 8

Avidan O., Petrenko M., Becker R., Beck S., Linscheid M., Pietrokovski S. & Jurkevitch E. (2017). Identification and Characterization of Differentially-Regulated Type IVb Pilin Genes Necessary for Predation in Obligate Bacterial Predators /631/326/1320 /631/326/325 /38 article. Scientific Reports, Vol: 7

Fishilevich S., Nudel R., Rappaport N., Hadar R., Plaschkes I., Stein T. I., Rosen N., Kohn A., Twik M., Safran M., Lancet D. & Cohen D. (2017). GeneHancer: Genome-wide integration of enhancers and target genes in GeneCards. Database-The Journal Of Biological Databases And Curation, Vol: 2017

Chapat C., Jafarnejad S. M., Matta-Camacho E., Hesketh G. G., Gelbart I. A., Attig J., Gkogkas C. G., Alain T., Stern-Ginossar N., Fabian M. R., Gingras A., Duchaine T. F. & Sonenberg N. (2017). Cap-binding protein 4EHP effects translation silencing by microRNAs. Proceedings of the National Academy of Sciences of the United States of America, Vol: 114, Page: 5425-5430

Salaroglio I. C., Panada E., Moiso E., Buondonno I., Provero P., Rubinstein M., Kopecka J. & Riganti C. (2017). PERK induces resistance to cell death elicited by endoplasmic reticulum stress and chemotherapy. Molecular Cancer, Vol: 16

Segal Salto S. M., Hansson K., Sapir T., Kaplan A., Levy T., Schweizer M., Frotscher M., James P. & Reiner O. (2017). Proteomics insights into infantile neuronal ceroid lipofuscinosis (CLN1) point to the involvement of cilia pathology in the disease. Human Molecular Genetics, Vol: 26, Page: 1678-1693

Wassermann Dozorets D. R. & Rubinstein M. (2017). C/EBP beta LIP augments cell death by inducing osteoglycin. Cell Death & Disease, Vol: 8

Mittelman K. & Barkai N. (2017). The genetic requirements for pentose fermentation in budding yeast. G3-GENES GENOMES GENETICS, Vol: 7, Page: 1743-1752

Gorelik A., Sapir T., Woodruff T. M. & Reiner O. (2017). Serping1/C1 inhibitor affects cortical development in a cell autonomous and non-cell autonomous manner. Frontiers in Cellular Neuroscience, Vol: 11

Aram L., Yacobi-Sharon K. & Arama E. (2017). CDPs: caspase-dependent non-lethal cellular processes. Cell Death and Differentiation, Vol: 24, Page: 1307-1310

Mildner A., Chapnik E., Varol D., Aychek T., Lampl N., Rivkin N., Bringmann A., Paul F., Boura-Halfon S., Hayoun Y. S., Barnett Itzhaki I. Z., Amit I., Hornstein E. & Jung S. (2017). MicroRNA-142 controls thymocyte proliferation. European Journal of Immunology, Vol: 47, Page: 1142-1152

Morgenstern M., Stiller S. B., Lübbert P., Peikert C. D., Dannenmaier S., Drepper F., Weill U., Höß P., Feuerstein R., Gebert M., Bohnert M., van der Laan M., Schuldiner M., Schütze C., Oeljeklaus S., Pfanner N., Wiedemann N. & Warscheid B. (2017). Definition of a High-Confidence Mitochondrial Proteome at Quantitative Scale. Cell Reports, Vol: 19, Page: 2836-2852

Zatorska E., Gal L., Schmitt J., Bausewein D., Schuldiner M. & Strahl S. (2017). Cellular consequences of diminished protein O-mannosyltransferase activity in bakers yeast. International Journal of Molecular Sciences, Vol: 18

Dasari S. K., Bialik S., Levin-Zaidman S., Levin-Salomon V., Merrill A. H. J., Futerman A. H. & Kimchi A. (2017). Signalome-wide RNAi screen identifies GBA1 as a positive mediator of autophagic cell death. Cell Death and Differentiation, Vol: 24, Page: 1288-1302

Varol D., Mildner A., Blank T., Shemer A., Barashi N., Yona S., David E., Boura-Halfon S., Segal-Hayoun Y., Chappell-Maor L., Keren-Shaul H., Leshkowitz D., Hornstein E., Fuhrmann M., Amit I., Maggio N., Prinz M. & Jung S. (2017). Dicer Deficiency Differentially Impacts Microglia of the Developing and Adult Brain. Immunity, Vol: 46, Page: 1030-1044.e8

Wakim J., Arman E., Becker Herman S., Kramer M. P., Bakos E., Shachar I. & Elson A. (2017). The PTPROt tyrosine phosphatase functions as an obligate haploinsufficient tumor suppressor in vivo in B-cell chronic lymphocytic leukemia. Oncogene, Vol: 36, Page: 3686-3694

Shilo B. Z. & Sprinzak D. (2017). The lipid-binding side of notch ligands. EMBO Journal, Vol: 36, Page: 2182-2183

Amitai G. & Sorek R. (2017). Intracellular signaling in CRISPR-Cas defense. Science, Vol: 357, Page: 550-551

Blecher R., Krief S., Galili T., Assaraf E., Stern T., Anekstein Y., Agar G. & Zelzer E. (2017). The Proprioceptive System Regulates Morphologic Restoration of Fractured Bones. Cell Reports, Vol: 20, Page: 1775-1783

Blecher R., Krief S., Galili T., Biton I. E., Stern T., Assaraf E., Levanon D., Appel E., Anekstein Y., Agar G., Groner Y. & Zelzer E. (2017). The Proprioceptive System Masterminds Spinal Alignment: Insight into the Mechanism of Scoliosis. Developmental Cell, Vol: 42, Page: 388-399.e3

Heinemann M. & Pilpel Y. (2017). Editorial overview: Systems biology for biotechnology. Current Opinion in Biotechnology, Vol: 46, Page: iv-v

Gershoni M., Hauser R., Yogev L., Lehavi O., Azem F., Yavetz H., Pietrokovski S. & Kleiman S. E. (2017). A familial study of azoospermic men identifies three novel causative mutations in three new human azoospermia genes. Genetics in Medicine, Vol: 19, Page: 998-1006

Apel A. R., Hoban K., Chuartzman S., Tonikian R., Sidhu S., Schuldiner M., Wendland B. & Prosser D. (2017). Syp1 regulates the clathrin-mediated and clathrin-independent endocytosis of multiple cargo proteins through a novel sorting motif. Molecular Biology of the Cell, Vol: 28, Page: 2434-2448

Benhalevy D., Biran I., Bochkareva E. S., Sorek R. & Bibi E. (2017). Evidence for a cytoplasmic pool of ribosome-free mRNAs encoding inner membrane proteins in Escherichia coli. PLoS ONE, Vol: 12

Metzl-Raz E., Kafri M., Yaakov G., Soifer I., Gurvich Y. & Barkai N. (2017). Principles of cellular resource allocation revealed by condition-dependent proteome profiling. eLife, Vol: 6

Cohen N., Breker M., Bakunts A., Pesek K., Chas A., Argemi J., Orsi A., Gal L., Chuartzman S., Wigelman Y., Jonas F., Walter P., Ernst R., Aragon T., van Anken E. & Schuldiner M. (2017). Iron affects Ire1 clustering propensity and the amplitude of endoplasmic reticulum stress signaling. Journal of Cell Science, Vol: 130, Page: 3222-3233

Wroblewska J. P., Cruz-Zaragoza L. D., Yuan W., Schummer A., Chuartzman S. G., de Boer B. R., Oeljeklaus S., Schuldiner M., Zalckvar E., Warscheid B., Erdmann R. & van der Klei d. K. I. J. (2017). Saccharomyces cerevisiae cells lacking Pex3 contain membrane vesicles that harbor a subset of peroxisomal membrane proteins. Biochimica et Biophysica Acta - Molecular Cell Research, Vol: 1864, Page: 1656-1667

Schuldiner M. (2017). Maya Schuldiner. Current biology : CB, Vol: 27, Page: R982-R984

Geva Y., Crissman J., Arakel E. C., Gomez-Navarro N., Chuartzman S. G., Stahmer K. R., Schwappach B., Miller E. A. & Schuldiner M. (2017). Two novel effectors of trafficking and maturation of the yeast plasma membrane H⁺-ATPase. Traffic, Vol: 18, Page: 672-682

Moor A. E., Golan M., Massasa E. E., Lemze D., Weizman T., Shenhav R., Baydatch S., Mizrahi O., Winkler R., Golani O., Stern-Ginossar N. & Itzkovitz S. (2017). Global mRNA polarization regulates translation efficiency in the intestinal epithelium. Science, Vol: 357, Page: 1299-1303

Cao J., Packer J., Waterston R., Trapnell C., Shendure J., Rajaram S., Wu L. F., Altschuler S. J., Liang J., O'Brien L. E., Eizenberg-Magar I., Rimer J., Friedman N., Metzl-Raz E., Kafri M., Yaakov G., Soifer I., Gurvich Y., Barkai N., Mardinoglu A., Ponten F., Uhlen M., Rahi S. J., Cross F. R., Baumgart M. & Noack S. (2017). Principles of Systems Biology, No. 21. Cell Systems, Vol: 5, Page: 158-160

Barkai N. (2017). Chromatin dynamics During DNA replication. , Page: 37-37

Voichek Y., Bar-Ziv R. & Barkai N. (2017). Expression homeostasis during DNA replication. , Page: 237-237

Plotnikov A., Kozer N., Krupalnik V., Peles S., Mor N., Rais Y., Hanna J. H. & Barr H. M. (2017). A multiplexed screening method for pluripotency. Stem Cell Research, Vol: 23, Page: 158-162

Napoletano F., Gibert B., Yacobi-Sharon K., Vincent S., Favrot C., Mehlen P., Girard V., Teil M., Chatelain G., Walter L., Arama E. & Mollereau B. (2017). p53-dependent programmed necrosis controls germ cell homeostasis during spermatogenesis. PLoS Genetics, Vol: 13

Zabezhinsky D., Sperber H. & Gerst J. (2017). Localizing mRNAs encoding mitochondrial proteins in yeast by fluorescence microscopy and subcellular fractionation. , Page: 197-216

Millman A., Dar D., Shamir M. & Sorek R. (2017). Computational prediction of regulatory, premature transcription termination in bacteria. Nucleic Acids Research, Vol: 45, Page: 886-893

Tayar A. M., Karzbrun E., Noireaux V. & Bar-Ziv R. H. (2017). Synchrony and pattern formation of coupled genetic oscillators on a chip of artificial cells. Proceedings Of The National Academy Of Sciences Of The United States Of America-Physical Sciences, Vol: 114, Page: 11609-11614

Dahan N., Schuldiner M. & Zalckvar E. (2017). Peroxisome mini-libraries: Systematic approaches to study peroxisomes made easy. , Page: 305-318

Stelzer G., Plaschkes I., Oz Levi L. D., Alkelai A., Olender T., Zimmerman S., Twik M., Belinky F., Fishilevich S., Nudel R., Guan-Golan Y., Warshawsky D., Dahary D., Kohn A., Mazor Y., Kaplan S., Stein T. I., Baris H. N., Rappaport N., Safran M. & Lancet D. (2016). VarElect: The phenotype-based variation prioritizer of the GeneCards Suite. BMC Genomics, Vol: 17

Wang S., Fridman K., Markus B. & Volk T. (2016). Chromatin organization and replication in mature striated muscle rely on mechanical coupling through intact LINC-complex..

Hong H., Martinez-Marquez J. Y., Gal L., Schuldiner M. & Duncan M. C. (2016). Regulation of membrane trafficking during glucose starvation. Molecular Biology of the Cell, Vol: 27, Page: 257-257

Voichek Y., Bar-Ziv R. & Barkai N. (2016). A role for Rtt109 in buffering gene-dosage imbalance during DNA replication. Nucleus-Austin, Vol: 7, Page: 375-381

Segal-Salto M., Sapir T. & Reiner O. (2016). Reversible cysteine acylation regulates the activity of human palmitoyl-protein thioesterase 1 (PPT1). PLoS ONE, Vol: 11

Gerst J., Haimovich G., Zabezhinski D., Haas B., Slobodin B., Purushothaman P., Fan L., Levin J. & Nusbaum C. (2016). Use of the MS2 aptamer and coat protein for RNA localization in yeast: A response to "MS2 coat proteins bound to yeast mRNAs block 5 to 3 degradation and trap mRNA decay products: Implications for the localization of mRNAs by MS2-MCP system". RNA, Vol: 22, Page: 660-666

Fishilevich S., Zimmerman S., Kohn A., Iny Stein S. T., Olender T., Kolker E., Safran M. & Lancet D. (2016). Genic insights from integrated human proteomics in GeneCards.. Database : the journal of biological databases and curation, Vol: 2016

Tamari Z., Yona A. H., Pilpel Y. & Barkai N. (2016). Rapid evolutionary adaptation to growth on an 'unfamiliar' carbon source. BMC Genomics, Vol: 17

Olender T., Keydar I., Pinto J. M., Tatarskyy P., Alkelai A., Chien M., Fishilevich S., Restrepo D., Matsunami H., Gilad Y. & Lancet D. (2016). The human olfactory transcriptome. BMC Genomics, Vol: 17

Rivera-Monroy J., Musiol L., Unthan-Fechner K., Farkas A., Clancy A., Coy-Vergara J., Weill U., Gockel S., Lin S., Corey D. P., Kohl T., Stroebel P., Schuldiner M., Schwappach B. & Vilardi F. (2016). Mice lacking WRB reveal differential biogenesis requirements of tail-anchored proteins in vivo. Scientific Reports, Vol: 6

Aviram N., Ast T., Costa E. A., Arakel E. C., Chuartzman S. G., Jan C. H., Hassenteufel S., Dudek J., Jung M., Schorr S., Zimmermann R., Schwappach B., Weissman J. S. & Schuldiner M. (2016). The SND proteins constitute an alternative targeting route to the endoplasmic reticulum. eLife, Vol: 540, Page: 134-+

Dar D., Prasse D., Schmitz R. A. & Sorek R. (2016). Widespread formation of alternative 3' UTR isoforms via transcription termination in archaea. Nature Microbiology, Vol: 1

Stelzer G., Rosen N., Plaschkes I., Zimmerman S., Twik M., Fishilevich S., Stein T. I., Nudel R., Lieder I., Mazor Y., Kaplan S., Dahary D., Warshawsky D., Guan-Golan Y., Kohn A., Rappaport N., Safran M. & Lancet D. (2016). The GeneCards suite: From gene data mining to disease genome sequence analyses. Current protocols in bioinformatics / editoral board, Andreas D. Baxevanis ... [et al.], Vol: 2016, Page: 1.30.1-1.30.33

Tichon A., Gil N., Lubelsky Y., Solomon T. H., Lemze D., Itzkovitz S., Stern-Ginossar N. & Ulitsky I. (2016). A conserved abundant cytoplasmic long noncoding RNA modulates repression by Pumilio proteins in human cells. Nature Communications, Vol: 7

Gur D., Pierantoni M., Dov N. E., Hirsh A., Feldman Y. (., Weiner S. & Addadi L. (2016). Guanine Crystallization in Aqueous Solutions Enables Control over Crystal Size and Polymorphism. Crystal Growth & Design, Vol: 16, Page: 4975-4980

Gur D., Leshem B., Farstey V., Oron D., Addadi L. & Weiner S. (2016). Light-Induced Color Change in the Sapphirinid Copepods: Tunable Photonic Crystals. Advanced Functional Materials, Vol: 26, Page: 1393-1399

Rez P., Aoki T., March K., Gur D., Krivanek O. L., Dellby N., Lovejoy T. C., Wolf S. G. & Cohen H. (2016). Damage-free vibrational spectroscopy of biological materials in the electron microscope. Nature Communications, Vol: 7

Kumar S., Kolodkin-Gal I., Vesper O., Alam N., Schueler-Furman O., Moll I. & Engelberg-Kulka H. (2016). Escherichia coli quorum-sensing EDF, a peptide generated by novel multiple distinct mechanisms and regulated by trans-translation. mBio, Vol: 7

Cohen O., Doron S., Wurtzel O., Dar D., Edelheit S., Karunker I., Mick E. & Sorek R. (2016). Comparative transcriptomics across the prokaryotic tree of life. Nucleic Acids Research, Vol: 44, Page: W46-W53

Eisenberg-Bord M., Shai N., Schuldiner M. & Bohnert M. (2016). A Tether is a Tether is a Tether: Tethering at Membrane Contact Sites. Developmental Cell, Vol: 39, Page: 395-409

Klionsky D. J., Abdelmohsen K., Abe A., Abedin M. J., Abeliovich H., Arozena A. A., Adachi H., Adams C. M., Adams P. D., Adeli K., Adhihetty P. J., Adler S. G., Agam G., Agarwal R., Aghi M. K., Agnello M., Agostinis P., Aguilar P. V., Aguirre-Ghiso J., Airoldi E. M., Ait-Si-Ali S., Akematsu T., Akporiaye E. T., Al-Rubeai M., Albaiceta G. M., Albanese C., Albani D., Albert M. L., Aldudo J., Alguel H., Alirezaei M., Alloza I., Almasan A., Almonte-Beceril M., Alnemri E. S., Alonso C., Altan-Bonnet N., Altieri D. C., Alvarez S., Alvarez-Erviti L., Alves S., Arama E., Eisenberg-Lerner A., Elazar Z., Galili G. & Kimchi A. (2016). Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition). Autophagy, Vol: 12, Page: 1-222

Stanford S. M., Svensson M. N. D., Sacchetti C., Pilo C. A., Wu D. J., Kiosses W. B., Hellvard A., Bergum B., Muench G. R. A., Elly C., Liu Y., den Hertog J., Elson A., Sap J., Mydel P., Boyle D. L., Corr M., Firestein G. S. & Bottini N. (2016). Receptor Protein Tyrosine Phosphatase alpha-Mediated Enhancement of Rheumatoid Synovial Fibroblast Signaling and Promotion of Arthritis in Mice. Arthritis & Rheumatology, Vol: 68, Page: 359-369

Hormoz S., Singer Z. S., Linton J. M., Antebi Y. E., Shraiman B. I. & Elowitz M. B. (2016). Inferring Cell-State Transition Dynamics from Lineage Trees and Endpoint Single-Cell Measurements. Cell Systems, Vol: 3, Page: 419-433.e8

Bintu L., Yong J., Antebi Y. E., McCue K., Kazuki Y., Uno N., Oshimura M. & Elowitz M. B. (2016). Dynamics of epigenetic regulation at the single-cell level. Science, Vol: 351, Page: 720-724

Vitenshtein A., Weisblum Y., Hauka S., Halenius A., Oiknine-Djian E., Tsukerman P., Bauman Y., Bar-On Y., Stern-Ginossar N., Enk J., Ortenberg R., Tai J., Markel G., Blumberg R. S., Hengel H., Jonjic S., Wolf D. G., Adler H., Kammerer R. & Mandelboim O. (2016). CEACAM1-Mediated Inhibition of Virus Production. Cell Reports, Vol: 15, Page: 2331-2339

Dhar S. S., Lee S., Chen K., Zhu G., Oh W., Allton K., Gafni O., Kim Y. Z., Tomoiga A. S., Barton M. C., Hanna J. H., Wang Z., Li W. & Lee M. G. (2016). An essential role for UTX in resolution and activation of bivalent promoters. Nucleic Acids Research, Vol: 44, Page: 3659-3674

De Los Angeles A., Ferrari F., Fujiwara Y., Mathieu R., Lee S., Lee S., Tu H., Ross S., Chou S., Minh Nguyen, Wu Z., Theunissen T. W., Powell B. E., Imsoonthornruksa S., Chen J., Borkent M., Krupalnik V., Lujan E., Wernig M., Hanna J. H., Hochedlinger K., Pei D., Jaenisch R., Deng H., Orkin S. H., Park P. J. & Daley G. Q. (2016). Corrigendum: Failure to replicate the STAP cell phenomenon (vol 525, pg E6, 2015). eLife, Vol: 531, Page: 400-400

Koerver L., Melzer J., Roca E. A., Teichert D., Glatter T., Arama E. & Broemer M. (2016). The de-ubiquitylating enzyme DUBA is essential for spermatogenesis in Drosophila. Cell Death Differ, Vol: 23, Page: 2019-2030

Colasanto M. P., Eyal S., Mohassel P., Bamshad M., Bonnemann C. G., Zelzer E., Moon A. M. & Kardon G. (2016). Development of a subset of forelimb muscles and their attachment sites requires the ulnar-mammary syndrome gene Tbx3. Disease Models & Mechanisms, Vol: 9, Page: 1257-1269

Ordan E. & Volk T. (2016). Amontillado is required for Drosophila Slit processing and for tendon-mediated muscle patterning. Biology Open, Vol: 5, Page: 1530-1534

Cohen A., Weindling E., Rabinovich E., Nachman I., Fuchs S., Chuartzman S., Gal L., Schuldiner M. & Bar-Nun S. (2016). Water-Transfer Slows Aging in Saccharomyces cerevisiae. PLoS ONE, Vol: 11

Sheyn D., Shapiro G., Tawackoli W., Jun D. S., Koh Y., Kang K. B., Su S., Da X., Ben-David S., Bez M., Yalon E., Antebi B., Avalos P., Stern T., Zelzer E., Schwarz E. M., Gazit Z., Pelled G., Bae H. M. & Gazit D. (2016). PTH Induces Systemically Administered Mesenchymal Stem Cells to Migrate to and Regenerate Spine Injuries. Molecular Therapy, Vol: 24, Page: 318-330

Zabezhinsky D. & Gerst J. (2016). Yeast as a model for the study of RNA-binding proteins and their role in cell physiology.. Molecular Biology of the Cell, Vol: 27, Page: 851-851

Bar-Ziv R., Voichek Y. & Barkai N. (2016). Dealing with Gene-Dosage Imbalance during S Phase. Trends in Genetics, Vol: 32, Page: 717-723

Rotem O., Nesper J., Borovok I., Gorovits R., Kolot M., Pasternak Z., Shin I., Glatter T., Pietrokovski S., Jenal U. & Jurkevitch E. (2016). An extended cyclic di-GMP network in the predatory bacterium Bdellovibrio bacteriovorus. Journal of Bacteriology, Vol: 198, Page: 127-137

Kafri M., Metzl-Raz E., Jona G. & Barkai N. (2016). The Cost of Protein Production. Cell Reports, Vol: 14, Page: 22-31

Reiner O., Karzbrun E., Kshirsagar A. & Kaibuchi K. (2016). Regulation of neuronal migration, an emerging topic in autism spectrum disorders. Journal of Neurochemistry, Vol: 136, Page: 440-456

Amitai G. & Sorek R. (2016). CRISPR-Cas adaptation: Insights into the mechanism of action. Nature Reviews Microbiology, Vol: 14, Page: 67-76

Schwartz S. (2016). Cracking the epitranscriptome. RNA, Vol: 22, Page: 169-174

Ast T., Michaelis S. & Schuldiner M. (2016). The Protease Ste24 Clears Clogged Translocons. Cell, Vol: 164, Page: 103-114

Kerschnitzki M., Akiva A., Ben Shoham S. A., Koifman N., Shimoni E., Rechav K., Arraf A. A., Schultheiss T. M., Talmon Y., Zelzer E., Weiner S. & Addadi L. (2016). Transport of membrane-bound mineral particles in blood vessels during chicken embryonic bone development. Bone, Vol: 83, Page: 65-72

Weingarten-Gabbay S., Elias-Kirma S., Nir R., Gritsenko A. A., Stern-Ginossar N., Yakhini Z., Weinberger A. & Segal E. (2016). Comparative genetics: Systematic discovery of cap-independent translation sequences in human and viral genomes. Science, Vol: 351

Heimer G., Oz-Levi D., Eyal E., Edvardson S., Nissenkorn A., Ruzzo E. K., Szeinberg A., Maayan C., Mai-Zahav M., Efrati O., Pras E., Reznik-Wolf H., Lancet D., Goldstein D. B., Anikster Y., Shalev S. A., Elpeleg O. & Ben Zeev B. (2016). TECPR2 mutations cause a new subtype of familial dysautonomia like hereditary sensory autonomic neuropathy with intellectual disability. European Journal of Paediatric Neurology, Vol: 20, Page: 69-79

Rousso T., Schejter E. D. & Shilo B. (2016). Orchestrated content release from Drosophila glue-protein vesicles by a contractile actomyosin network. Nature Cell Biology, Vol: 18, Page: 181-190

Tamari Z. & Barkai N. (2016). Natural Diversity in Pentose Fermentation Is Explained by Variations in Histone Deacetylases. Cell Reports, Vol: 14, Page: 458-463

Chen J., Shishkin A. A., Zhu X., Kadri S., Maza I., Guttman M., Hanna J. H., Regev A. & Garber M. (2016). Evolutionary analysis across mammals reveals distinct classes of long non-coding RNAs. GENOME BIOLOGY, Vol: 17

Hoffman Y., Bublik D. R., Ugalde A. P., Elkon R., Biniashvili T., Agami R., Oren M. & Pilpel Y. (2016). 3UTR Shortening Potentiates MicroRNA-Based Repression of Pro-differentiation Genes in Proliferating Human Cells. PLoS Genetics, Vol: 12

Voichek Y., Bar-Ziv R. & Barkai N. (2016). Expression homeostasis during DNA replication. Science, Vol: 351, Page: 1087-1090

Haimovich G., Cohen-Zontag O. & Gerst J. E. (2016). A role for mRNA trafficking and localized translation in peroxisome biogenesis and function?. Biochimica et Biophysica Acta - Molecular Cell Research, Vol: 1863, Page: 911-921

Gavish A., Shwartz A., Weizman A., Schejter E., Shilo B. & Barkai N. (2016). Periodic patterning of the Drosophila eye is stabilized by the diffusible activator Scabrous. Nature Communications, Vol: 7

Shai N., Schuldiner M. & Zalckvar E. (2016). No peroxisome is an island - Peroxisome contact sites. Biochimica et Biophysica Acta - Molecular Cell Research, Vol: 1863, Page: 1061-1069

Preis M., Schneiderman J., Koren B., Ben-Yosef Y., Levin-Ashkenazi D., Shapiro S., Cohen T., Blich M., Israeli-Amit M., Sarnatzki Y., Gershtein D., Shofti R., Lewis B. S., Shaul Y. & Flugelman M. Y. (2016). Co-expression of fibulin-5 and VEGF 165 increases long-term patency of synthetic vascular grafts seeded with autologous endothelial cells. Gene Therapy, Vol: 23, Page: 237-246

Orme M. H., Liccardi G., Moderau N., Feltham R., Wicky-John S., Tenev T., Aram L., Wilson R., Bianchi K., Morris O., Domingues C. M., Robertson D., Tare M., Wepf A., Williams D., Bergmann A., Gstaiger M., Arama E., Ribeiro P. S. & Meier P. (2016). The unconventional myosin CRINKLED and its mammalian orthologue MYO7A regulate caspases in their signalling roles. Nature Communications, Vol: 7

Ben-Ari Fuchs S., Lieder I., Stelzer G., Mazor Y., Buzhor E., Kaplan S., Bogoch Y., Plaschkes I., Shitrit A., Rappaport N., Kohn A., Edgar R., Shenhav L., Safran M., Lancet D., Guan-Golan Y., Warshawsky D. & Shtrichman R. (2016). GeneAnalytics: An Integrative Gene Set Analysis Tool for Next Generation Sequencing, RNAseq and Microarray Data. OMICS A Journal of Integrative Biology, Vol: 20, Page: 139-151

Weinberger L., Ayyash M., Novershtern N. & Hanna J. (2016). Dynamic stem cell states: Naive to primed pluripotency in rodents and humans. Nature Reviews Molecular Cell Biology, Vol: 17, Page: 155-169

Rahimi N., Averbukh I., Haskel Ittah I. M., Degani N., Schejter E., Barkai N. & Shilo B. (2016). A WntD-Dependent Integral Feedback Loop Attenuates Variability in Drosophila Toll Signaling. Developmental Cell, Vol: 36, Page: 401-414

Yofe I., Weill U., Meurer M., Chuartzman S., Zalckvar E., Goldman O., Ben-Dor S., Schutze C., Wiedemann N., Knop M., Khmelinskii A. & Schuldiner M. (2016). One library to make them all: Streamlining the creation of yeast libraries via a SWAp-Tag strategy. Nature Methods, Vol: 13, Page: 371-378

Aram L., Braun T., Braverman C., Kaplan Y., Ravid L., Levin-Zaidman S. & Arama E. (2016). A Krebs Cycle Component Limits Caspase Activation Rate through Mitochondrial Surface Restriction of CRL Activation. Developmental Cell, Vol: 37, Page: 15-33

Shilo B. Z. (2016). New twists in Drosophila cell signaling. The journal of Biological chemistry, Vol: 291, Page: 7805-7808

Dvash E. & Rubinstein M. (2016). A surprising mediator of oxidative DNA damage.. Cell cycle (Georgetown, Tex.), Vol: 15, Page: 869-70

Dar D., Shamir M., Mellin J. R., Koutero M., Stern-Ginossar N., Cossart P. & Sorek R. (2016). Term-seq reveals abundant ribo-regulation of antibiotics resistance in bacteria. Science, Vol: 352

Karmon A. & Pilpel Y. (2016). Biological causal links on physiological and evolutionary time scales. eLife, Vol: 5

Doron S., Fedida A., Hernndez-Prieto M. A., Sabehi G., Karunker I., Stazic D., Feingersch R., Steglich C., Futschik M., Lindell D. & Sorek R. (2016). Transcriptome dynamics of a broad host-range cyanophage and its hosts. ISME Journal, Vol: 10, Page: 1437-1455

Zabezhinsky D., Slobodin B., Rapaport D. & Gerst J. (2016). An Essential Role for COPI in mRNA Localization to Mitochondria and Mitochondrial Function. Cell Reports, Vol: 15, Page: 540-549

Tal P., Eizenberger S., Cohen E., Goldfinger N., Pietrokovski S., Oren M. & Rotter V. (2016). Cancer therapeutic approach based on conformational stabilization of mutant p53 protein by small peptides. Oncotarget, Vol: 7, Page: 11817-11837

Ben-Reuven L. & Reiner O. (2016). Modeling the autistic cell: iPSCs recapitulate developmental principles of syndromic and nonsyndromic ASD. Development Growth and Differentiation, Vol: 58, Page: 481-491

Vodo D., Sarig O., Geller S., Ben-Asher E., Olender T., Bochner R., Goldberg I., Nosgorodsky J., Alkelai A., Tatarskyy P., Peled A., Baum S., Barzilai A., Ibrahim S. M., Zillikens D., Lancet D. & Sprecher E. (2016). Identification of a Functional Risk Variant for Pemphigus Vulgaris in the ST18 Gene. PLoS Genetics, Vol: 12

Chou T. F., Chuang Y. T., Hsieh W. C., Chang P. Y., Liu H. Y., Mo S. T., Hsu T. S., Miaw S. C., Chen R. H., Kimchi A. & Lai M. Z. (2016). Tumour suppressor death-associated protein kinase targets cytoplasmic HIF-1α for Th17 suppression. Nature Communications, Vol: 7

Segal D., Dhanyasi N., Schejter E. D. & Shilo B. (2016). Adhesion and Fusion of Muscle Cells Are Promoted by Filopodia. Developmental Cell, Vol: 38, Page: 291-304

Eitan C. & Hornstein E. (2016). Vulnerability of microRNA biogenesis in FTDALS. Brain Research, Vol: 1647, Page: 105-111

Bar-Ziv R., Voichek Y. & Barkai N. (2016). Chromatin dynamics during DNA replication. Genome Research, Vol: 26, Page: 1245-1256

Alkelai A., Olender T., Haffner-Krausz R., Tsoory M. M., Boyko V., Tatarskyy P., Gross-Isseroff R., Milgrom R., Shushan S., Blau I., Cohn E., Beeri R., Levy-Lahad E., Pras E. & Lancet D. (2016). A role for TENM1 mutations in congenital general anosmia. Clinical Genetics, Vol: 90, Page: 211-219

Weiner A., Lara Astiaso A. D., Krupalnik V., Gafni O., David E., Winter D. R., Hanna J. H. & Amit I. (2016). Co-ChIP enables genome-wide mapping of histone mark co-occurrence at single-molecule resolution. Nature biotechnology, Vol: 34, Page: 953-961

Goren M. G., Doron S., Globus R., Amitai G., Sorek R. & Qimron U. (2016). Repeat Size Determination by Two Molecular Rulers in the Type I-E CRISPR Array. Cell Reports, Vol: 16, Page: 2811-2818

Kimchi A., Yoffe Y., David M., Kalaora R., Povodovski L., Friedlander G., Feldmesser E. & Ainbinder E. (2016). Cap-independent translation by DAP5 controls cell fate decisions in human embryonic stem cells. GENES & DEVELOPMENT, Vol: 30, Page: 1991-2004

Bercovich-Kinori A., Tai J., Gelbart I. A., Shitrit A., Ben Moshe M. S., Drori Y., Itzkovitz S., Mandelboim M. & Stern-Ginossar N. (2016). A systematic view on influenza induced host shutoff. eLife, Vol: 5

Lopatina A. & Sorek R. (2016). CRISPRCas: Spacer Diversity Determines the Efficiency of Defense. Current Biology, Vol: 26, Page: R683-R685

Shwartz Y., Viukov S., Krief S. & Zelzer E. (2016). Joint Development Involves a Continuous Influx of Gdf5-Positive Cells. Cell Reports, Vol: 15, Page: 2577-2587

Yosef I., Edgar R., Levy A., Amitai G., Sorek R., Munitz A., Qimron U., Mueller B., Tarkowski P. & Weiss D. (2016). Natural selection underlies apparent stress-induced mutagenesis in a bacteriophage infection model. Nature Microbiology, Vol: 1

Gavish A. & Barkai N. (2016). A two-step patterning process increases the robustness of periodic patterning in the fly eye. Journal of Biological Physics, Vol: 42, Page: 317-338

Shwartz A., Dhanyasi N., Schejter E. D. & Shilo B. Z. (2016). The drosophila formin Fhos is a primary mediator of sarcomeric thin-filament array assembly. eLife, Vol: 5

Marenco L., Wang R., McDougal R., Olender T., Twik M., Bruford E., Liu X., Zhang J., Lancet D., Shepherd G. & Crasto C. (2016). ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory receptor-odorant interactions. Database-The Journal Of Biological Databases And Curation, Vol: 2016

Vanhoutte D., Schips T. G., Kwong J. Q., Davis J., Tjondrokoesoemo A., Brody M. J., Sargent M. A., Kanisicak O., Yi H., Gao Q. Q., Rabinowitz J. E., Volk T., McNally E. M. & Molkentin J. D. (2016). Thrombospondin expression in myofibers stabilizes muscle membranes. eLife, Vol: 5

Bar-Yaacov D., Frumkin I., Yashiro Y., Chujo T., Ishigami Y., Chemla Y., Blumberg A., Schlesinger O., Bieri P., Greber B., Ban N., Zarivach R., Alfonta L., Pilpel Y., Suzuki T. & Mishmar D. (2016). Mitochondrial 16S rRNA Is Methylated by tRNA Methyltransferase TRMT61B in All Vertebrates. PLoS Biology, Vol: 14

Hollander D., Donyo M., Atias N., Mekahel K., Melamed Z., Yannai S., Lev-Maor G., Shilo A., Schwartz S., Barshack I., Sharan R. & Ast G. (2016). A network-based analysis of colon cancer Splicing changes reveals a tumorigenesis-favoring regulatory pathway emanating from ELK1. Genome Research, Vol: 26, Page: 541-553

Megyeri M., Riezman H., Schuldiner M. & Futerman A. H. (2016). Making Sense of the Yeast Sphingolipid Pathway. Journal of Molecular Biology, Vol: 428, Page: 4765-4775

Yifrach E., Chuartzman S., Dahan N., Maskit S., Zada L., Weill U., Yofe I., Olender T., Schuldiner M. & Zalckvar E. (2016). Characterization of proteome dynamics during growth in oleate reveals a new peroxisome-targeting receptor. Journal of Cell Science, Vol: 129, Page: 4067-4075

Shilo B. Z. (2016). Developmental roles of Rhomboid proteases. SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY, Vol: 60, Page: 5-9

Appe E., Weissmann S., Salzberg Y., Orlovsky K., Negreanu V., Tsoory M., Raanan C., Feldmesser E., Bernstein Y., Wolstein O., Levanon D. & Groner Y. (2016). An ensemble of regulatory elements controls Runx3 spatiotemporal expression in subsets of dorsal root ganglia proprioceptive neurons. GENES & DEVELOPMENT, Vol: 30, Page: 2607-2622

Li J., Fuchs S., Zhang J., Wellford S., Schuldiner M. & Wang X. (2016). An unrecognized function for COPII components in recruiting the viral replication protein BMV 1a to the perinuclear ER. Journal of Cell Science, Vol: 129, Page: 3597-3608

Kahana C. (2016). Protein degradation, the main hub in the regulation of cellular polyamines. Biochemical Journal, Vol: 473, Page: 4551-4558

Ben Shoham S. A., Rot C., Stern T., Krief S., Akiva A., Dadosh T., Sabany H., Lu Y., Kadler K. E. & Zelzer E. (2016). Deposition of collagen type I onto skeletal endothelium reveals a new role for blood vessels in regulating bone morphology. Development (Cambridge), Vol: 143, Page: 3933-3943

Barnea M., Olender T., Bedford M. T. & Elson A. (2016). Regulation of receptor-type protein tyrosine phosphatases by their C-terminal tail domains. Biochemical Society Transactions, Vol: 44, Page: 1295-1303

Finkelshtein E., Levy-Apter E. & Elson A. (2016). Production of Osteoclasts for Studying Protein Tyrosine Phosphatase Signaling. , Page: 283-300

Sagi D., Rak R., Gingold H., Adir I., Maayan G., Dahan O., Broday L., Pilpel Y. & Rechavi O. (2016). Tissue- and Time-Specific Expression of Otherwise Identical tRNA Genes. PLoS Genetics, Vol: 12

Kafri M., Metzl-Raz E., Jonas F. & Barkai N. (2016). Rethinking cell growth models. FEMS Yeast Research, Vol: 16

Schuldiner M. (2016). Maya Schuldiner: The systems that define us: Schuldiner leverages high-throughput approaches to investigate novel protein functions. Journal of Cell Biology, Vol: 213, Page: 3-4

Emde A., Rivkin N., Behlke M. A. & Hornstein E. (2016). Quantification of dicer activity in mammalian cell lysates using a non-radioactive fluorescence method. , Page: 21-27

Yardeni T. & Hornstein E. (2016). Protocol for high-content screening for the impact of overexpressed MicroRNAs on primary motor neurons. , Page: 11-19

Reichenstein I. & Hornstein E. (2016). Protocol for miRNA in situ hybridization on mouse spinal cord. , Page: 1-10

Rappaport N., Plaschkes I., Fishilevich S., Twik M., Stein T. I., Safran M., Nudel R., Oz-Levi D. & Lancet D. (2016). Integrated identification of disease-gene links and their utility in next-generation sequencing interpretation. , Page: 463-464

Schuldiner M. & Guo W. (2015). Editorial overview: Cell organelles: Organelle communication: New means and new views. Current Opinion in Cell Biology, Vol: 35, Page: v-vi

Sauerwald J., Jores T., Eisenberg-Bord M., Chuartzman S. G., Schuldiner M. & Rapaport D. (2015). Genome-Wide Screens in Saccharomyces cerevisiae Highlight a Role for Cardiolipin in Biogenesis of Mitochondrial Outer Membrane Multispan Proteins.. Molecular and Cellular Biology, Vol: 35, Page: 3200-3211

Volk T. & Wang S. (2015). Protection of muscle nuclei. Oncotarget, Vol: 6, Page: 23046-23047

Ordan E. & Volk T. (2015). A non-signaling role of robo2 in tendons is essential for slit processing and muscle patterning. Development (Cambridge), Vol: 142, Page: 3512-3518

Keshet R., Reuven N. & Shaul Y. (2015). c-Abl forces YAP to switch sides.. Molecular & cellular oncology, Vol: 2, Page: e995006

Stern-Ginossar N. & Ingolia N. T. (2015). Ribosome Profiling As A Tool To Decipher Viral Complexity. Annual Review of Virology, Vol: 2, Page: 335-349

Katz Y., Wang E. T., Silterra J., Schwartz S., Wong B., Thorvaldsdottir H., Robinson J. T., Mesirov J. P., Airoldi E. M. & Burge C. B. (2015). Quantitative visualization of alternative exon expression from RNA-seq data. Bioinformatics, Vol: 31, Page: 2400-2402

Umansky K., Gruenbaum-Cohen Y., Tsoory M., Feldmesser E., Goldenberg D., Brenner O. & Groner Y. (2015). Runx1 Transcription Factor Is Required for Myoblasts Proliferation during Muscle Regeneration. PLoS Genetics, Vol: 11

Wang S. & Volk T. (2015). Composite biopolymer scaffolds shape muscle nucleus: Insights and perspectives from Drosophila. Bioarchitecture, Vol: 5, Page: 35-43

Gur D., Shimon L. J. & Parkin S. (2015). Crystal structure of disodium 2-amino-6-oxo-6,7-dihydro-1 H-purine-1,7-diide heptahydrate. Acta crystallographica. Section E, Crystallographic communications, Vol: 71, Page: 281-283

Gur D., Palmer B. A., Leshem B., Oron D., Fratzl P., Weiner S. & Addadi L. (2015). The Mechanism of Color Change in the Neon Tetra Fish: A Light-Induced Tunable Photonic Crystal Array. Angewandte Chemie (International ed. in English), Vol: 54, Page: 12426-12430

Hirsch A., Gur D., Polishchuk I., Levy D., Pokroy B., Cruz-Cabeza A. J., Addadi L., Kronik L. & Leiserowitz L. (2015). "Guanigma": The Revised Structure of Biogenic Anhydrous Guanine. Chemistry of Materials, Vol: 27, Page: 8289-8297

Gur D., Leshem B., Pierantoni M., Farstey V., Oron D., Weiner S. & Addadi L. (2015). Structural Basis for the Brilliant Colors of the Sapphirinid Copepods. Journal of the American Chemical Society, Vol: 137, Page: 8408-8411

Rotem O., Pasternak Z., Shimoni E., Belausov E., Porat Z., Pietrokovski S. & Jurkevitch E. (2015). Cell-cycle progress in obligate predatory bacteria is dependent upon sequential sensing of prey recognition and prey quality cues. Proceedings of the National Academy of Sciences of the United States of America, Vol: 112, Page: E6028-E6037

Rais Y., Zviran A., Geula S., Gafni O., Chomsky E., Viukov S., Mansour A. A., Caspi I., Krupalnik V., Zerbib M., Maza I., Mor N., Baran D., Weinberger L., Jaitin D. A., Lara-Astiaso D., Blecher-Gonen R., Shipony Z., Mukamel Z., Hagai T., Gilad S., Amann-Zalcenstein D., Tanay A., Amit I., Novershtern N. & Hanna J. H. (2015). Deterministic direct reprogramming of somatic cells to pluripotency (vol 502, pg 65, 2013): Deterministic direct reprogramming of somatic cells to pluripotency (Nature (2013) 502 (65-70) DOI: 10.1038/nature12587). Nature, Vol: 520, Page: 710-710

Gafni O., Weinberger L., Mansour A. A., Manor Y. S., Chomsky E., Ben-Yosef D., Kalma Y., Viukov S., Maza I., Zviran A., Rais Y., Shipony Z., Mukamel Z., Krupalnik V., Zerbib M., Geula S., Caspi I., Schneir D., Shwartz T., Gilad S., Amann-Zalcenstein D., Benjamin S., Amit I., Tanay A., Massarwa R., Novershtern N. & Hanna J. H. (2015). Derivation of novel human ground state naive pluripotent stem cells (vol 504, pg 282, 2013): Derivation of novel human ground state naive pluripotent stem cells. Nature, Vol: 520, Page: 710

Jovanovic M., Rooney M. S., Mertins P., Przybylski D., Chevrier N., Satija R., Rodriguez E. H., Fields A. P., Schwartz S., Raychowdhury R., Mumbach M. R., Eisenhaure T., Rabani M., Gennert D., Lu D., Delorey T., Weissman J. S., Carr S. A., Hacohen N. & Regev A. (2015). Dynamic profiling of the protein life cycle in response to pathogens. Science, Vol: 347

Yanagida H., Gispan A., Kadouri N., Rozen S., Sharon M., Barkai N. & Tawfik D. S. (2015). The Evolutionary Potential of Phenotypic Mutations. PLoS Genetics, Vol: 11

Shanzer M., Ricardo-Lax I., Keshet R., Reuven N. & Shaul Y. (2015). The polyomavirus middle T-antigen oncogene activates the Hippo pathway tumor suppressor Lats in a Src-dependent manner. Oncogene, Vol: 34, Page: 4190-4198

Elbaz-Alon Y., Eisenberg-Bord M., Shinder V., Stiller S. B., Shimoni E., Wiedemann N., Geiger T. & Schuldiner M. (2015). Lam6 Regulates the Extent of Contacts between Organelles. Cell Reports, Vol: 12, Page: 7-14

Reuven N., Adler J., Porat Z., Polonio-Vallon T., Hofmann T. & Shaul Y. (2015). The tyrosine kinase c-Abl promotes homeodomaininteracting protein kinase 2 (HIPK2) accumulation and activation in response to DNA damage. Journal of Biological Chemistry, Vol: 290, Page: 16478-16488

Maza I., Caspi I., Zviran A., Chomsky E., Rais Y., Viukov S., Geula S., Buenrostro J., Weinberger L., Krupalnik V., Hanna S., Zerbib M., Dutton J., Greenleaf W., Massarwa R., Novershtern N. & Hanna J. (2015). Transient acquisition of pluripotency during somatic cell transdifferentiation with iPSC reprogramming factors. Nature biotechnology, Vol: 33, Page: 769-774

Pilpel Y. & Rechavi O. (2015). The Lamarckian chicken and the Darwinian egg. Biology Direct, Vol: 10

Moldavski O., Amen T., Levin-Zaidman S., Eisenstein M., Rogachev I., Brandis A., Kaganovich D. & Schuldiner M. (2015). Lipid Droplets Are Essential for Efficient Clearance of Cytosolic Inclusion Bodies. Developmental Cell, Vol: 33, Page: 603-610

Korem T., Zeevi D., Suez J., Weinberger A., Avnit Sagi S. T., Pompan-Lotan M., Matot E., Jona G., Harmelin A., Cohen N., Sirota-Madi A., Thaiss C. A., Pevsner-Fischer M., Sorek R., Xavier R. J., Elinav E. & Segal E. (2015). Growth dynamics of gut microbiota in health and disease inferred from single metagenomic samples. Science (New York, N.Y.), Vol: 349, Page: 1101-1106

Shilo S., Melamed-Bessudo C., Dorone Y., Barkai N. & Levy A. (2015). DNA crossover motifs associated with epigenetic modifications delineate open chromatin regions in arabidopsis. The Plant cell, Vol: 27, Page: 2427-2436

Dhanyasi N., Segal D., Shimoni E., Shinder V., Shilo B., VijayRaghavan K. & Schejter E. D. (2015). Surface apposition and multiple cell contacts promote myoblast fusion in Drosophila flight muscles. The Journal of Cell Biology, Vol: 211, Page: 191-203

Ricardo Lax L. I., Ramanan V., Michailidis E., Shamia T., Reuven N., Rice C., Shlomai A. & Shaul Y. (2015). Hepatitis B virus induces RNR-R2 expression via DNA damage response activation. Journal of Hepatology, Vol: 63, Page: 789-796

Dobzinski N., Chuartzman S. G., Kama R., Schuldiner M. & Gerst J. (2015). Starvation-Dependent Regulation of Golgi Quality Control Links the TOR Signaling and Vacuolar Protein Sorting Pathways. Cell Reports, Vol: 12, Page: 1876-1886

Weill U., Yofe I., Chuartzman S. & Schuldiner M. (2015). One library to make them all: Streamlining yeast library creation by a SWAp-Tag (SWAT) strategy. Yeast, Vol: 32, Page: S77-S77

Schuldiner M. (2015). A novel regulator determines the extent of contacts between organelles. FEBS Journal, Vol: 282, Page: 10-10

Hansen K. G., Aviram N., Schuldiner M. & Herrmann J. M. (2015). The J protein Djp1 is involved in the targeting of mitochondrial precursor proteins. FEBS Journal, Vol: 282, Page: 101-101

Brenner S., Bercovich Z., Feiler Y., Keshet R. & Kahana C. (2015). Dual regulatory role of polyamines in adipogenesis. The journal of Biological chemistry, Vol: 290, Page: 27384-27392

Zwighaft Z., Aviram R., Shalev M., Rousso Noori N. L., Kraut-Cohen J., Golik M., Brandis A., Reinke H., Aharoni A., Kahana C. & Asher G. (2015). Circadian Clock Control by Polyamine Levels through a Mechanism that Declines with Age. Cell Metabolism, Vol: 22, Page: 874-885

Emde A., Eitan C., Liou L., Libby R. T., Rivkin N., Magen I., Reichenstein I., Oppenheim H., Eilam R., Silvestroni A., Alajajian B., Ben-Dov I. Z., Aebischer J., Savidor A., Levin Y., Sons R., Hammond S. M., Ravits J. M., Moller T. & Hornstein E. (2015). Dysregulated miRNA biogenesis downstream of cellular stress and ALS-causing mutations: A new mechanism for ALS. The EMBO Journal, Vol: 34, Page: 2633-2651

Yona A. H., Frumkin I. & Pilpel Y. (2015). A Relay Race on the Evolutionary Adaptation Spectrum. Cell, Vol: 163, Page: 549-559

Tirosh O., Cohen Y., Shitrit A., Shani O., Le-Trilling V. T. K., Trilling M., Friedlander G., Tanenbaum M. & Stern-Ginossar N. (2015). The Transcription and Translation Landscapes during Human Cytomegalovirus Infection Reveal Novel Host-Pathogen Interactions. PLoS Pathogens, Vol: 11

Bobrowska A. & Schuldiner M. (2015). Cell scientist to watch - Maya Schuldiner. Journal of Cell Science, Vol: 128, Page: 4029-4031

Umansky K. B., Feldmesser E. & Groner Y. (2015). Genomic-wide transcriptional profiling in primary myoblasts reveals Runx1-regulated genes in muscle regeneration. Genomics Data, Vol: 6, Page: 120-122

Dvash E., Har-Tal M., Barak S., Meir O. & Rubinstein M. (2015). Leukotriene C 4 is the major trigger of stress-induced oxidative DNA damage. Nature Communications, Vol: 6

Fields A. P., Rodriguez E. H., Jovanovic M., Stern-Ginossar N., Haas B. J., Mertins P., Raychowdhury R., Hacohen N., Carr S. A., Ingolia N. T., Regev A. & Weissman J. S. (2015). A Regression-Based Analysis of Ribosome-Profiling Data Reveals a Conserved Complexity to Mammalian Translation. Molecular Cell, Vol: 60, Page: 816-827

Ordan E. & Volk T. (2015). Cleaved Slit directs embryonic muscles. Fly, Vol: 9, Page: 82-85

De Los Angeles L. A. A., Ferrari F., Fujiwara Y., Mathieu R., Lee S., Lee S., Tu H., Ross S., Chou S., Nguyen M., Wu Z., Theunissen T. W., Powell B. E., Imsoonthornruksa S., Chen J., Borkent M., Krupalnik V., Lujan E., Wernig M., Hanna J. H., Hochedlinger K., Pei D., Jaenisch R., Deng H., Orkin S. H., Park P. J. & Daley G. Q. (2015). Failure to replicate the STAP cell phenomenon. Nature, Vol: 525, Page: E6-E9

Bauer O., Sharir A., Kimura A., Hantisteanu S., Takeda S. & Groner Y. (2015). Loss of osteoblast Runx3 produces severe congenital osteopenia. Molecular and Cellular Biology, Vol: 35, Page: 1097-1109

Hoffman Y. & Pilpel Y. (2015). MicroRNAs silence the noisy genome. Science, Vol: 348, Page: 41-42

Kozhemyakina E., Lassar A. B. & Zelzer E. (2015). A pathway to bone: Signaling molecules and transcription factors involved in chondrocyte development and maturation. Development (Cambridge), Vol: 142, Page: 817-831

Reuven N., Shanzer M. & Shaul Y. (2015). Tyrosine phosphorylation of WW proteins. Experimental Biology and Medicine, Vol: 240, Page: 375-382

Ber Y., Shiloh R., Gilad Y., Degani N., Bialik S. & Kimchi A. (2015). DAPK2 is a novel regulator of mTORC1 activity and autophagy. Cell Death and Differentiation, Vol: 22, Page: 465-475

Eshkar-Oren I., Krief S., Ferrara N., Elliott A. M. & Zelzer E. (2015). Vascular patterning regulates interdigital cell death by a ros-mediated mechanism. Development (Cambridge), Vol: 142, Page: 672-680

Geula S., Moshitch-Moshkovitz S., Dominissini D., Mansour A. A., Kol N., Salmon-Divon M., Hershkovitz V., Peer E., Mor N., Manor Y. S., Ben-Haim M., Eyal E., Yunger S., Pinto Y., Jaitin D. A., Viukov S., Rais Y., Krupalnik V., Chomsky E., Zerbib M., Maza I., Rechavi Y., Massarwa R., Hanna S., Amit I., Levanon E. Y., Amariglio N., Stern-Ginossar N., Novershtern N., Rechavi G. & Hanna J. H. (2015). m⁶A mRNA methylation facilitates resolution of naïve pluripotency toward differentiation. Science, Vol: 347, Page: 1002-1006

Vinograd-Byk H., Sapir T., Cantarero L., Lazo P. A., Zeligson S., Lev D., Lerman-Sagie T., Renbaum P., Reiner O. & Levy-Lahad E. (2015). The spinal muscular atrophy with pontocerebellar hypoplasia gene VRK1 regulates neuronal migration through an Amyloid-β precursor protein-dependent mechanism. Journal of Neuroscience, Vol: 35, Page: 936-942

Goldfarb T., Sberro H., Weinstock E., Cohen O., Doron S., Charpak-Amikam Y., Afik S., Ofir G. & Sorek R. (2015). BREX is a novel phage resistance system widespread in microbial genomes. EMBO Journal, Vol: 34, Page: 169-183

Geron E., Boura-Halfon S., Schejter E. D. & Shilo B. Z. (2015). The Edges of Pancreatic Islet β Cells Constitute Adhesive and Signaling Microdomains. Cell Reports, Vol: 10, Page: 317-325

Irie N., Weinberger L., Tang W. W. C., Kobayashi T., Viukov S., Manor Y. S., Dietmann S., Hanna J. H. & Surani M. A. (2015). SOX17 Is a Critical Specifier of Human Primordial Germ Cell Fate. Cell, Vol: 160, Page: 253-268

Greenman R., Gorelik A., Sapir T., Baumgart J., Zamor V., Segal Salto S. M., Levin-Zaidman S., Aidinis V., Aoki J., Nitsch R., Vogt J. & Reiner O. (2015). Non-cell autonomous and non-catalytic activities of ATX in the developing brain. Frontiers in Neuroscience, Vol: 9

Stern-Ginossar N. (2015). Decoding viral infection by ribosome profiling. Journal of Virology, Vol: 89, Page: 6164-6166

Riemersma M., Mandel H., Van Beusekom E., Gazzoli I., Roscioli T., Eran A., Gershoni-Baruch R., Gershoni M., Pietrokovski S., Vissers L. E., Lefeber D. J., Willemsen M. A., Wevers R. A. & Van Bokhoven H. (2015). Absence of α-and β-dystroglycan is associated with Walker-Warburg syndrome. Neurology, Vol: 84, Page: 2177-2182

Oz Levi L. D., Weiss B., Lahad A., Greenberger S., Pode-Shakked B., Somech R., Olender T., Tatarsky P., Marek-Yagel D., Pras E., Anikster Y. & Lancet D. (2015). Exome sequencing as a differential diagnosis tool: Resolving mild trichohepatoenteric syndrome. Clinical Genetics, Vol: 87, Page: 602-603

Wang S., Reuveny A. & Volk T. (2015). Nesprin provides elastic properties to muscle nuclei by cooperating with spectraplakin and EB1. Journal of Cell Biology, Vol: 209, Page: 529-538

Nicenboim J., Malkinson G., Lupo T., Asaf L., Sela Y., Mayseless O., Gibbs-Bar L., Senderovich N., Hashimshony T., Shin M. S., Jerafi-Vider A., Avraham-Davidi I., Krupalnik V., Hofi R., Almog G., Astin J. W., Golani O., Ben-Dor S., Crosier P. S., Herzog W., Lawson N. D., Hanna J. H., Yanai I. & Yaniv K. (2015). Lymphatic vessels arise from specialized angioblasts within a venous niche. Nature, Vol: 522, Page: 56-61

Keshet R. D., Adler J., Lax I. R., Shanzer M. H., Porat Z., Reuven N. & Shaul Y. (2015). C-Abl antagonizes the YAP oncogenic function. Cell Death and Differentiation, Vol: 22, Page: 935-945

Eyal S., Blitz E., Shwartz Y., Akiyama H., Schweitzer R. & Zelzer E. (2015). On the development of the patella. Development (Cambridge), Vol: 142, Page: 1831-1839

Eitan C. & Hornstein E. (2015). Astro-logics with microRNAs. EMBO Journal, Vol: 34, Page: 1143-1144

Riganti C., Kopecka J., Panada E., Barak S. & Rubinstein M. (2015). The role of C/EBP-β LIP in multidrug resistance. JNCI-JOURNAL OF THE NATIONAL CANCER INSTITUTE, Vol: 107

Levy A., Goren M. G., Yosef I., Auster O., Manor M., Amitai G., Edgar R., Qimron U. & Sorek R. (2015). CRISPR adaptation biases explain preference for acquisition of foreign DNA. Nature, Vol: 520, Page: 505-510

Nathan G., Kredo-Russo S., Geiger T., Lenz A., Kaspi H., Hornstein E. & Efrat S. (2015). MiR-375 promotes redifferentiation of adult human β cells expanded in vitro. PLoS ONE, Vol: 10

Liberman N., Gandin V., Svitkin Y. V., David M., Virgili G., Jaramillo M., Holcik M., Nagar B., Kimchi A. & Sonenberg N. (2015). DAP5 associates with eIF2β and eIF4AI to promote Internal Ribosome Entry Site driven translation. Nucleic Acids Research, Vol: 43, Page: 3764-3775

Lotem J., Levanon D., Negreanu V., Bauer O., Hantisteanu S., Dicken J. & Groner Y. (2015). Runx3 at the interface of immunity, inflammation and cancer. Biochimica Et Biophysica Acta-Reviews On Cancer, Vol: 1855, Page: 131-143

Ordan E., Brankatschk M., Dickson B., Schnorrer F. & Volk T. (2015). Slit cleavage is essential for producing an active, stable, non-diffusible short-range signal that guides muscle migration. Development (Cambridge), Vol: 142, Page: 1431-1436

Schuldiner M. & Zalckvar E. (2015). Peroxisystem: Harnessing systems cell biology to study peroxisomes. Biology of the Cell, Vol: 107, Page: 89-97

Tayar A., Karzbrun E., Noireaux V. & Bar-Ziv R. (2015). Propagating gene expression fronts in a one-dimensional coupled system of artificial cells. Nature Physics, Vol: 11, Page: 1037-1041

Stern T., Aviram R., Rot C., Galili T., Sharir A., Achrai N. K., Keller Y., Shahar R. & Zelzer E. (2015). Isometric scaling in developing long bones is achieved by an optimal epiphyseal growth balance. PLoS Biology, Vol: 13

Tanenbaum M. E., Stern-Ginossar N., Weissman J. S. & Vale R. D. (2015). Regulation of mRNA translation during mitosis. eLife, Vol: 4

Belinky F., Nativ N., Stelzer G., Zimmerman S., Stein T. I., Safran M. & Lancet D. (2015). PathCards: Multi-source consolidation of human biological pathways. Database : the journal of biological databases and curation, Vol: 2015

Zhu X., Petrovski S., Xie P., Ruzzo E. K., Lu Y. F., McSweeney K. M., Ben-Zeev B., Nissenkorn A., Anikster Y., Oz-Levi D., Dhindsa R. S., Hitomi Y., Schoch K., Spillmann R. C., Heimer G., Marek-Yagel D., Tzadok M., Han Y., Worley G., Goldstein J., Jiang Y. H., Lancet D., Pras E., Shashi V., Mchale D., Need A. C. & Goldstein D. B. (2015). Whole-exome sequencing in undiagnosed genetic diseases: Interpreting 119 trios. Genetics in Medicine, Vol: 17, Page: 774-781

Zviran A. & Hanna J. H. (2014). Lucky iPSCs. GENOME BIOLOGY, Vol: 15

Cohen Y., Klug Y., Dimitrov L., Erez Z., Chuartzman S., Elinger D., Yofe I., Soliman K., Gartner J., Thoms S., Schekman R., Elbaz-Alon Y., Zalckvar E. & Schuldiner M. (2014). Peroxisomes are juxtaposed to strategic sites on mitochondria. Molecular BioSystems, Vol: 10, Page: 1742-1748

Reiner O. & Sapir T. (2014). Mark/Par-1 marking the polarity of migrating neurons. , Page: 97-111

Shwartz Y. & Zelzer E. (2014). Nonradioactive in situ hybridization on skeletal tissue sections. , Page: 203-215

Gur D., Leshem B., Oron D., Weiner S. & Addadi L. (2014). The Structural Basis for Enhanced Silver Reflectance in Koi Fish Scale and Skin. Journal of the American Chemical Society, Vol: 136, Page: 17236-17242

Schwartz S., Mumbach M. R., Jovanovic M., Wang T., Maciag K., Bushkin G. G., Mertins P., Ter-Ovanesyan D., Habib N., Cacchiarelli D., Sanjana N. E., Freinkman E., Pacold M. E., Satija R., Mikkelsen T. S., Hacohen N., Zhang F., Carr S. A., Lander E. S. & Regev A. (2014). Perturbation of m6A writers reveals two distinct classes of mRNA methylation at internal and 5' sites. Cell Reports, Vol: 8, Page: 284-296

Schwartz S., Bernstein D. A., Mumbach M. R., Jovanovic M., Herbst R. H., Leon-Ricardo B. X., Engreitz J. M., Guttman M., Satija R., Lander E. S., Fink G. & Regev A. (2014). Transcriptome-wide mapping reveals widespread dynamic-regulated pseudouridylation of ncRNA and mRNA. Cell, Vol: 159, Page: 148-162

Arias C., Weisburd B., Stern-Ginossar N., Mercier A., Madrid A. S., Bellare P., Holdorf M., Weissman J. S. & Ganem D. (2014). KSHV 2.0: A Comprehensive Annotation of the Kaposi's Sarcoma-Associated Herpesvirus Genome Using NextGeneration Sequencing Reveals Novel Genomic and Functional Features. PLoS Pathogens, Vol: 10

Ingolia N. T., Brar G. A., Stern-Ginossar N., Harris M. S., Talhouarne G. J. S., Jackson S. E., Wills M. R. & Weissman J. S. (2014). Ribosome Profiling Reveals Pervasive Translation Outside of Annotated Protein-Coding Genes. Cell Reports, Vol: 8, Page: 1365-1379

Bialik S. & Kimchi A. (2014). The DAP-kinase interactome. Apoptosis, Vol: 19, Page: 316-328

Tsukerman P., Stern-Ginossar N., Yamin R., Ophir Y., Miller A., Stanietsky N. & Mandelboim O. (2014). Expansion of CD16 positive and negative human NK cells in response to tumor stimulation. European Journal of Immunology, Vol: 44, Page: 1517-1525

Volk T., Wang S., Rotstein B. & Paululat A. (2014). Matricellular proteins in development: Perspectives from the Drosophila heart. Matrix Biology, Vol: 37, Page: 162-166

Geron E., Schejter E. & Shilo B. (2014). Assessing the secretory capacity of pancreatic acinar cells. Jove-Journal Of Visualized Experiments

Mick E. & Sorek R. (2014). High-resolution metagenomics. Nature biotechnology, Vol: 32, Page: 750-751

Tamari Z., Rosin D., Voichek Y. & Barkai N. (2014). Coordination of gene expression and growth-rate in natural populations of budding yeast. PLoS ONE, Vol: 9

Thiel I. V., Volkmann G., Pietrokovski S. & Mootz H. D. (2014). An atypical naturally split intein engineered for highly efficient protein labeling. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, Vol: 53, Page: 1306-1310

Bloom-Ackermann Z., Navon S., Gingold H., Towers R., Pilpel Y. & Dahan O. (2014). A Comprehensive tRNA Deletion Library Unravels the Genetic Architecture of the tRNA Pool. PLoS Genetics, Vol: 10

Elinav H., Hershko-Klement A., Valinsky L., Jaffe J., Wiseman A., Shimon H., Braun E., Paitan Y., Block C., Sorek R. & Nir-Paz R. (2014). Pregnancy-associated listeriosis: Clinical characteristics and geospatial analysis of a 10-year period in Israel. Clinical Infectious Diseases, Vol: 59, Page: 953-961

Gingold H., Tehler D., Christoffersen N., Nielsen M., Asmar F., Kooistra S., Christophersen N., Christensen L., Borre M., Sorensen K., Andersen L., Andersen C., Hulleman E., Wurdinger T., Ralfkiaer E., Helin K., Gronbaek K., Omtoft T., Waszak S., Dahan O., Pedersen J., Lund A. & Pilpel Y. (2014). A dual program for translation regulation in cellular proliferation and differentiation.. Cell, Vol: 158, Page: 1281-1292

Knobler H. Y. & Elson A. (2014). Metabolic regulation by protein tyrosine phosphatases. Journal of Biomedical Research, Vol: 28, Page: 157-168

Ast T. & Schuldiner M. (2014). All roads lead to Rome-SRP independent translocation into the endoplasmic reticulum.

Weingarten-Gabbay S., Khan D., Liberman N., Yoffe Y., Bialik S., Das S., Oren M. & Kimchi A. (2014). The translation initiation factor DAP5 promotes IRES-driven translation of p53 mRNA. Oncogene, Vol: 33, Page: 611-618

Yofe I. & Schuldiner M. (2014). Primers-4-Yeast: A comprehensive web tool for planning primers for Saccharomyces cerevisiae. Yeast, Vol: 31, Page: 77-80

Vieira N. M., Naslavsky M. S., Licinio L., Kok F., Schlesinger D., Vainzof M., Sanchez N., Kitajima J. P., Gal L., Cavacana N., Serafini P. R., Chuartzman S., Vasquez C., Mimbacas A., Nigro V., Pavanello R. C., Schuldiner M., Kunkel L. M. & Zatz M. (2014). A defect in the RNA-processing protein HNRPDL causes limb-girdle muscular dystrophy 1G (LGMD1G). Human Molecular Genetics, Vol: 23, Page: 4103-4110

Aviram N. & Schuldiner M. (2014). Embracing the void-how much do we really know about targeting and translocation to the endoplasmic reticulum?. Current Opinion in Cell Biology, Vol: 29, Page: 8-17

Hermesh O., Genz C., Yofe I., Sinzel M., Rapaport D., Schuldiner M. & Jansen R. (2014). Yeast phospholipid biosynthesis is linked to mRNA localization. Journal of Cell Science, Vol: 127, Page: 3373-3381

Fluman N., Navon S., Bibi E. & Pilpel Y. (2014). mRNA-programmed translation pauses in the targeting of E. coli membrane proteins. eLife, Vol: 3, Page: 1-19

Gilad Y., Shiloh R., Ber Y., Bialik S. & Kimchi A. (2014). Discovering Protein-Protein Interactions within the Programmed Cell Death Network Using a Protein-Fragment Complementation Screen. Cell Reports, Vol: 8, Page: 909-921

Mellin J. R., Koutero M., Dar D., Nahori M. A., Sorek R. & Cossart P. (2014). Sequestration of a two-component response regulator by a riboswitch-regulated noncoding RNA. Science, Vol: 345, Page: 940-943

Hart Y., Reich-Zeliger S., Antebi Y. E., Zaretsky I., Mayo A. E., Alon U. & Friedman N. (2014). Paradoxical signaling by a secreted molecule leads to homeostasis of cell levels. Cell, Vol: 158, Page: 1022-1032

Adamovich Y., Adler J., Meltser V., Reuven N. & Shaul Y. (2014). AMPK couples p73 with p53 in cell fate decision. Cell Death and Differentiation, Vol: 21, Page: 1451-1459

Bauer O., Hantisteanu S., Lotem J. & Groner Y. (2014). Carcinogen-induced skin tumor development requires leukocytic expression of the transcription factor Runx3. Cancer Prevention Research, Vol: 7, Page: 913-926

Markovitch O. & Lancet D. (2014). Multispecies population dynamics of prebiotic compositional assemblies. Journal of Theoretical Biology, Vol: 357, Page: 26-34

Liu P., Kaplan A., Yuan B., Hanna J. H., Lupski J. R. & Reiner O. (2014). Passage number is a major contributor to genomic structural variations in mouse iPSCs. Stem Cells, Vol: 32, Page: 2657-2667

Hoffman Y., Pilpel Y. & Oren M. (2014). MicroRNAs and Alu elements in the p53-Mdm2-Mdm4 regulatory network. Journal of Molecular Cell Biology, Vol: 6, Page: 192-197

Kaspi H., Pasvolsky R. & Hornstein E. (2014). Could microRNAs contribute to the maintenance of β cell identity?. Trends in Endocrinology and Metabolism, Vol: 25, Page: 285-292

Xiao X., Mruk D. D., Tang E. I., Massarwa R., Mok K. W., Li N., Wong C. K. C., Lee W. M., Snapper S. B., Shilo B., Schejter E. D. & Cheng C. Y. (2014). N-WASP Is Required for Structural Integrity of the Blood-Testis Barrier. PLoS Genetics, Vol: 10

Yofe I., Zafrir Z., Blau R., Schuldiner M., Tuller T., Shapiro E. & Ben-Yehezkel T. (2014). Accurate, Model-Based Tuning of Synthetic Gene Expression Using Introns in S. cerevisiae. PLoS Genetics, Vol: 10

Finkelshtein E., Lotinun S., Levy-Apter E., Arman E., den Hertog J., Baron R. & Elson A. (2014). Protein tyrosine phosphatases ε and α perform nonredundant roles in osteoclasts. Molecular Biology of the Cell, Vol: 25, Page: 1808-1818

Cohen S., Itkin M., Yeselson Y., Tzuri G., Portnoy V., Harel-Baja R., Lev S., Sa'ar U., Davidovitz-Rikanati R., Baranes N., Bar E., Wolf D., Petreikov M., Shen S., Ben-Dor S., Rogachev I., Aharoni A., Ast T., Schuldiner M., Belausov E., Eshed R., Ophir R., Sherman A., Frei B., Neuhaus H. E., Xu Y., Fei Z., Giovannoni J., Lewinsohn E., Tadmor Y., Paris H. S., Katzir N., Burger Y. & Schaffer A. A. (2014). The PH gene determines fruit acidity and contributes to the evolution of sweet melons. Nature Communications, Vol: 5

Shilo B. Z. (2014). The regulation and functions of MAPK pathways in Drosophila. Methods, Vol: 68, Page: 151-159

Breker M. & Schuldiner M. (2014). The emergence of proteome-wide technologies: Systematic analysis of proteins comes of age. Nature Reviews Molecular Cell Biology, Vol: 15, Page: 453-464

Emde A. & Hornstein E. (2014). MiRNAs at the interface of cellular stress and disease. EMBO Journal, Vol: 33, Page: 1428-1437

Elbaz-Alon Y., Rosenfeld-Gur E., Shinder V., Futerman A. H., Geiger T. & Schuldiner M. (2014). A dynamic interface between vacuoles and mitochondria in yeast. Developmental Cell, Vol: 30, Page: 95-102

Gershoni M. & Pietrokovski S. (2014). Reduced selection and accumulation of deleterious mutations in genes exclusively expressed in men. Nature Communications, Vol: 5

Krupalnik V. & Hanna J. H. (2014). Stem cells: The quest for the perfect reprogrammed cell. Nature, Vol: 511, Page: 160-162

Huja S., Oren Y., Biran D., Meyer S., Dobrindt U., Bernhard J., Becher D., Hecker M., Sorek R. & Ron E. Z. (2014). Fur is the master regulator of the extraintestinal pathogenic Escherichia coli response to serum. mBio, Vol: 5

Ast T., Aviram N., Chuartzman S. G. & Schuldiner M. (2014). A cytosolic degradation pathway, prERAD, monitors pre-inserted secretory pathway proteins. Journal of Cell Science, Vol: 127, Page: 3017-3023

Mosesson Y., Voichek Y. & Barkai N. (2014). Divergence and selectivity of expression-coupled histone modifications in budding yeasts. PLoS ONE, Vol: 9

Levanon D., Negreanu V., Lotem J., Bone K. R., Brenner O., Leshkowitz D. & Groner Y. (2014). Transcription factor Runx3 regulates interleukin-15-dependent natural Killer cell activation. Molecular and Cellular Biology, Vol: 34, Page: 1158-1169

Pasternak Z., Njagi M., Shani Y., Chanyi R., Rotem O., Lurie-Weinberger M. N., Koval S., Pietrokovski S., Gophna U. & Jurkevitch E. (2014). In and out: an analysis of epibiotic vs periplasmic bacterial predators. ISME Journal, Vol: 8, Page: 625-635

Zelzer E., Blitz E., Killian M. L. & Thomopoulos S. (2014). Tendon-to-bone attachment: From development to maturity. Birth Defects Research Part C-Embryo Today-Reviews, Vol: 102, Page: 101-112

Garin-Shkolnik T., Rudich A., Hotamisligil G. S. & Rubinstein M. (2014). FABP4 attenuates PPARγ and adipogenesis and is inversely correlated with PPARγ in adipose tissues. Diabetes, Vol: 63, Page: 900-911

Tsvetkov P., Myers N., Eliav R., Adamovich Y., Hagai T., Adler J., Navon A. & Shaul Y. (2014). NADH Binds and stabilizes the 26S proteasomes independent of ATP. Journal of Biological Chemistry, Vol: 289, Page: 11272-11281

Averbukh I., Ben-Zvi D., Mishra S. & Barkai N. (2014). Scaling morphogen gradients during tissue growth by a cell division rule. Development, Vol: 141, Page: 2150-2156

Kim B. M., You M., Chen C., Lee S. J., Hong Y., Kimchi A., Zhou X. Z. & Lee T. H. (2014). Death-associated protein kinase 1 has a critical role in aberrant tau protein regulation and function.. Cell Death & Disease, Vol: 5

Keays D., Barreiro L., Stuart-Fox D., Brar G., Schuldiner M. & Tahiliani M. (2014). The Biggest Challenges Facing Young Scientists. Cell, Vol: 157, Page: 763-764

Politi Y., Gal L., Kalifa Y., Ravid L., Elazar Z. & Arama E. (2014). Paternal mitochondrial destruction after fertilization is mediated by a common endocytic and autophagic pathway in drosophila. Developmental Cell, Vol: 29, Page: 305-320

Chapnik E., Rivkin N., Mildner A., Beck G., Pasvolsky R., Metzl-Raz E., Birger Y., Amir G., Tirosh I., Porat Z., Israel L. L., Lellouche E., Michaeli S., Lellouche J. M., Izraeli S., Jung S. & Hornstein E. (2014). MiR-142 orchestrates a network of actin cytoskeleton regulators during megakaryopoiesis. eLife, Vol: 2014

Levy-Apter E., Finkelshtein E., Vemulapalli V., Li S. S. -., Bedford M. T. & Elson A. (2014). Adaptor protein GRB2 promotes Src tyrosine kinase activation and podosomal organization by protein-tyrosine phosphatase ∈ in osteoclasts. Journal of Biological Chemistry, Vol: 289, Page: 36048-36058

Schmidt-Glenewinkel H. & Barkai N. (2014). Loss of growth homeostasis by genetic decoupling of cell division from biomass growth: Implication for size control mechanisms. Molecular Systems Biology, Vol: 10

Lesnik C., Cohen Y., Atir-Lande A., Schuldiner M. & Arava Y. (2014). OM14 is a mitochondrial receptor for cytosolic ribosomes that supports co-translational import into mitochondria. Nature Communications, Vol: 5

Avci D., Fuchs S., Schrul B., Fukumori A., Breker M., Frumkin I., Chen C. Y., Biniossek M. L., Kremmer E., Schilling O., Steiner H., Schuldiner M. & Lemberg M. K. (2014). The Yeast ER-Intramembrane Protease Ypf1 Refines Nutrient Sensing by Regulating Transporter Abundance. Molecular Cell, Vol: 56, Page: 630-640

Keshet R., Kraitshtein Z. B., Shanzer M., Adler J., Reuven N. & Shaul Y. (2014). C-Abl tyrosine kinase promotes adipocyte differentiation by targeting PPAR-gamma 2. Proceedings of the National Academy of Sciences of the United States of America, Vol: 111, Page: 16365-16370

Vardi N., Levy S., Gurvich Y., Polacheck T., Carmi M., Jaitin D., Amit I. & Barkai N. (2014). Sequential feedback induction stabilizes the phosphate starvation response in budding yeast. Cell Reports, Vol: 9, Page: 1122-1134

Elbaz-Alon Y., Morgan B., Clancy A., Amoako T. N., Zalckvar E., Dick T. P., Schwappach B. & Schuldiner M. (2014). The yeast oligopeptide transporter Opt2 is localized to peroxisomes and affects glutathione redox homeostasis. FEMS Yeast Research, Vol: 14, Page: 1055-1067

Soifer I. & Barkai N. (2014). Systematic identification of cell size regulators in budding yeast. Molecular Systems Biology, Vol: 10

Cohen Y. & Stern-Ginossar N. (2014). Manipulation of host pathways by human cytomegalovirus: Insights from genome-wide studies. Seminars in Immunopathology, Vol: 36, Page: 651-658

Rot C., Stern T., Blecher R., Friesem B. & Zelzer E. (2014). A mechanical jack-like mechanism drives spontaneous fracture healing in neonatal mice. Developmental Cell, Vol: 31, Page: 159-170

Magen I. & Hornstein E. (2014). Oligonucleotide-based therapy for neurodegenerative diseases. Brain Research, Vol: 1584, Page: 116-128

Gispan A., Carmi M. & Barkai N. (2014). Checkpoint-independent scaling of the Saccharomyces cerevisiae DNA replication program. BMC Medicine, Vol: 12

Milgrom-Hoffman M., Michailovici I., Ferrara N., Zelzer E. & Tzahor E. (2014). Endothelial cells regulate neural crest and second heart field morphogenesis. Biology Open, Vol: 3, Page: 679-688

Shiloh R., Bialik S. & Kimchi A. (2014). The DAPK family: A structure-function analysis. Apoptosis, Vol: 19, Page: 286-297

Minis A., Dahary D., Manor O., Leshkowitz D., Pilpel Y. & Yaron A. (2014). Subcellular transcriptomics-Dissection of the mRNA composition in the axonal compartment of sensory neurons. Developmental Neurobiology, Vol: 74, Page: 365-381

Levin-Salomon V., Bialik S. & Kimchi A. (2014). DAP-kinase and autophagy. Apoptosis, Vol: 19, Page: 346-356

Geva Y. & Schuldiner M. (2014). The back and forth of cargo exit from the endoplasmic reticulum. Current Biology, Vol: 24, Page: R130-R136

Giuliani G., Giuliani F., Volk T. & Rabouille C. (2014). The Drosophila RNA-binding protein HOW controls the stability of dgrasp mRNA in the follicular epithelium. Nucleic Acids Research, Vol: 42, Page: 1970-1986

Higdon R., Stewart E., Stanberry L., Haynes W., Choiniere J., Montague E., Anderson N., Yandl G., Janko I., Broomall W., Fishilevich S., Lancet D., Kolker N. & Kolker E. (2014). MOPED enables discoveries through consistently processed proteomics data. Journal of Proteome Research, Vol: 13, Page: 107-113

Hoffman Y., Bublik D. R., Pilpel Y. & Oren M. (2014). MiR-661 downregulates both Mdm2 and Mdm4 to activate p53. Cell Death and Differentiation, Vol: 21, Page: 302-309

Sela M. & Groner Y. (2014). Pioneer of hematopoietic colony-stimulating factors: Leo Sachs (1924-2013).. Unknown Journal, Vol: 111, Page: 1664-1665

Ben-Zvi D., Fainsod A., Shilo B. Z. & Barkai N. (2014). Scaling of dorsal-ventral patterning in the Xenopus laevis embryo. BioEssays, Vol: 36, Page: 151-156

Breker M., Gymrek M., Moldavski O. & Schuldiner M. (2014). LoQAtE-Localization and Quantitation ATlas of the yeast proteomE: A new tool for multiparametric dissection of single-protein behavior in response to biological perturbations in yeast. Nucleic Acids Research, Vol: 42, Page: D726-D730

Karzbrun E., Tayar A. M., Noireaux V. & Bar-Ziv R. (2014). Programmable on-chip DNA compartments as artificial cells. Science, Vol: 345, Page: 829-832

Bracha D., Karzbrun E., Daube S. S. & Bar-Ziv R. H. (2014). Emergent properties of dense DNA phases toward artificial biosystems on a surface. Accounts of Chemical Research, Vol: 47, Page: 1912-1921

Shalek A. K., Satija R., Shuga J., Trombetta J. J., Gennert D., Lu D., Chen P., Gertner R. S., Gaublomme J. T., Yosef N., Schwartz S., Fowler B., Weaver S., Wang J., Wang X., Ding R., Raychowdhury R., Friedman N., Hacohen N., Park H., May A. P. & Regev A. (2014). Single-cell RNA-seq reveals dynamic paracrine control of cellular variation. Nature, Vol: 510, Page: 363-369

Gilad Y. & Kimchi A. (2014). The programmed cell death GLuc PCA librarya powerful tool for pathway discovery and drug screening. Molecular and Cellular Oncology, Vol: 1

Gross R., Fouxon I., Lancet D. & Markovitch O. (2014). Quasispecies in population of compositional assemblies. BMC Evolutionary Biology, Vol: 14

Singh G., Srinivasan R., Cheng J., Peng Z., Fujimura K., Baek M. S., Panzer A. R., Tringe S. G., Chen F., Sorek R., Weng L., Bristow J., Wiener-Kronish J. P. & Lynch S. V. (2014). Rearrangement of a large novel Pseudomonas aeruginosa gene island in strains isolated from a patient developing ventilator-associated pneumonia. Journal of Clinical Microbiology, Vol: 52, Page: 2430-2438

Shilo B. Z. (2014). RTks in invertebrates: Lessons in signal transduction. , Page: 37-49

Shilo B. (2014). Life's blueprint: the science and art of embryo creation.

Levy S., Ihmels J., Carmi M., Weinberger A., Friedlander G. & Barkai N. (2014). Strategy of transcription regulation in the budding yeast. , Page: 209-232

Rappaport N., Twik M., Nativ N., Stelzer G., Bahir I., Stein T. I., Safran M. & Lancet D. (2014). MalaCards: A Comprehensive automatically-mined Database of human diseases. Current Protocols in Bioinformatics, Vol: 2014, Page: 1.24.1-1.24.19

Weyland M. S., Fellermann H., Hadorn M., Sorek D., Lancet D., Rasmussen S. & Fuechslin R. M. (2013). The MATCHIT automaton: Exploiting compartmentalization for the synthesis of branched polymers. Computational and Mathematical Methods in Medicine, Vol: 2013

Sorek R., Lawrence C. M. & Wiedenheft B. (2013). CRISPR-Mediated Adaptive Immune Systems in Bacteria and Archaea. Annual Review of Biochemistry, Vol: 82, Page: 237-266

Gur D., Politi Y., Sivan B., Fratzl P., Weiner S. & Addadi L. (2013). Guanine-based photonic crystals in fish scales form from an amorphous precursor. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, Vol: 52, Page: 388-391

Gal A., Habraken W., Gur D., Fratzl P., Weiner S. & Addadi L. (2013). Calcite crystal growth by a solid-state transformation of stabilized amorphous calcium carbonate nanospheres in a hydrogel. Angewandte Chemie (International ed.), Vol: 52, Page: 4867-4870

Laufman O., Freeze H. H., Hong W. & Lev S. (2013). Deficiency of the Cog8 Subunit in Normal and CDG-Derived Cells Impairs the Assembly of the COG and Golgi SNARE Complexes. Traffic, Vol: 14, Page: 1065-1077

Laufman O., Hong W. J. & Lev S. (2013). The COG complex interacts with multiple Golgi snares and enhances fusogenic assembly of SNARE complexes. Journal of Cell Science, Vol: 126, Page: 1506-1516

Kim S., Kedan A., Marom M., Gavert N., Keinan O., Selitrennik M., Laufman O. & Lev S. (2013). The phosphatidylinositol-transfer protein Nir2 binds phosphatidic acid and positively regulates phosphoinositide signalling. EMBO Reports, Vol: 14, Page: 891-899

Schwartz S., Agarwala S. D., Mumbach M. R., Jovanovic M., Mertins P., Shishkin A., Tabach Y., Mikkelsen T. S., Satija R., Ruvkun G., Carr S. A., Lander E. S., Fink G. R. & Regev A. (2013). High-resolution mapping reveals a conserved, widespread, dynamic mRNA methylation program in yeast meiosis. Cell, Vol: 155, Page: X1409-1421

Gilbert L. A., Larson M. H., Morsut L., Liu Z., Brar G. A., Torres S. E., Stern-Ginossar N., Brandman O., Whitehead E. H., Doudna J. A., Lim W. A., Weissman J. S. & Qi L. S. (2013). CRISPR-Mediated Modular RNA-Guided Regulation of Transcription in Eukaryotes. Cell, Vol: 154, Page: 442-451

Adamovich Y., Shlomai A., Tsvetkov P., Umansky K. B., Reuven N., Estall J. L., Spiegelman B. M. & Shaul Y. (2013). The Protein Level of PGC-1α, a Key Metabolic Regulator, Is Controlled by NADH-NQO1. Molecular and Cellular Biology, Vol: 33, Page: 2603-2613

Dicken J., Mildner A., Leshkowitz D., Touw I. P., Hantisteanu S., Groner Y. & Jung S. (2013). Transcriptional Reprogramming of CD11b⁺Esam^hi Dendritic Cell Identity and Function by Loss of Runx3. PLoS ONE, Vol: 8

Edelheit S., Schwartz S., Mumbach M. R., Wurtzel O. & Sorek R. (2013). Transcriptome-Wide Mapping of 5-methylcytidine RNA Modifications in Bacteria, Archaea, and Yeast Reveals m⁵C within Archaeal mRNAs. PLoS Genetics, Vol: 9

Finkelshtein D., Werman A., Novick D., Barak S. & Rubinstein M. (2013). LDL receptor and its family members serve as the cellular receptors for vesicular stomatitis virus. Proceedings of the National Academy of Sciences of the United States of America, Vol: 110, Page: 7306-7311

Blitz E., Sharir A., Akiyama H. & Zelzer E. (2013). Tendon-bone attachment unit is formed modularly by a distinct pool of Scx-and Sox9-positive progenitors. Development (Cambridge), Vol: 140, Page: 2680-2690

Breker M., Gymrek M. & Schuldiner M. (2013). A novel single-cell screening platform reveals proteome plasticity during yeast stress responses. Journal of Cell Biology, Vol: 200, Page: 839-850

Elson A. (2013). Protein Tyrosine Phosphatase Epsilon as a Regulator of Body Weight and Glucose Metabolism. , Page: 187-202

Kaspi H., Chapnik E., Levy M., Beck G., Hornstein E. & Soen Y. (2013). Brief report: miR-290-295 regulate embryonic stem cell differentiation propensities by repressing pax6. Stem Cells, Vol: 31, Page: 2266-2272

Yacobi-Sharon K., Namdar Y. & Arama E. (2013). Alternative germ cell death pathway in drosophila involves HtrA2/Omi, lysosomes, and a caspase-9 counterpart. Developmental Cell, Vol: 25, Page: 29-42

Yona A. H., Bloom-Ackermann Z., Frumkin I., Hanson-Smith V., Charpak-Amikam Y., Feng Q., Boeke J. D., Dahan O. & Pilpel Y. (2013). Trna genes rapidly change in evolution to meet novel translational demands. eLife, Vol: 2013

Yona S., Kim K., Wolf Y., Mildner A., Varol D., Breker M., Strauss-Ayali D., Viukov S., Guilliams M., Misharin A., Hume D. A., Perlman H., Malissen B., Zelzer E. & Jung S. (2013). Fate Mapping Reveals Origins and Dynamics of Monocytes and Tissue Macrophages under Homeostasis. Immunity, Vol: 38, Page: 79-91

Karunker I., Rotem O., Dori-Bachash M., Jurkevitch E. & Sorek R. (2013). A Global Transcriptional Switch between the Attack and Growth Forms of Bdellovibrio bacteriovorus. PLoS ONE, Vol: 8

Shilo B. Z., Haskel-Ittah M., Ben-Zvi D., Schejter E. D. & Barkai N. (2013). Creating gradients by morphogen shuttling. Trends in Genetics, Vol: 29, Page: 339-347

Shwartz A., Yogev S., Schejter E. D. & Shilo B. Z. (2013). Sequential activation of ETS proteins provides a sustained transcriptional response to EGFR signaling. Development (Cambridge), Vol: 140, Page: 2746-2754

Shwartz Y., Blitz E. & Zelzer E. (2013). One load to rule them all: Mechanical control of the musculoskeletal system in development and aging. Differentiation, Vol: 86, Page: 104-111

Keydar I., Ben-Asher E., Feldmesser E., Nativ N., Oshimoto A., Restrepo D., Matsunami H., Chien M., Pinto J. M., Gilad Y., Olender T. & Lancet D. (2013). General Olfactory Sensitivity Database (GOSdb): Candidate Genes and their Genomic Variations. Human Mutation, Vol: 34, Page: 32-41

Sorci M., Dassa B., Liu H., Anand G., Dutta A. K., Pietrokovski S., Belfort M. & Belfort G. (2013). Oriented covalent immobilization of antibodies for measurement of intermolecular binding forces between zipper-like contact surfaces of split inteins. Analytical Chemistry, Vol: 85, Page: 6080-6088

Kraut-Cohen J., Afanasieva E., Haim-Vilmovsky L., Slobodin B., Yosef I., Bibi E. & Gerst J. E. (2013). Translation- and SRP-independent mRNA targeting to the endoplasmic reticulum in the yeast Saccharomyces cerevisiae. Molecular Biology of the Cell, Vol: 24, Page: 3069-3084

Mick E., Stern A. & Sorek R. (2013). Holding a grudge: Persisting anti-phage CRISPR immunity in multiple human gut microbiomes. RNA Biology, Vol: 10, Page: 900-906

Mildner A., Chapnik E., Manor O., Yona S., Kim K., Aychek T., Varol D., Beck G., Itzhaki Z. B., Feldmesser E., Amit I., Hornstein E. & Jung S. (2013). Mononuclear phagocyte miRNome analysis identifies miR-142 as critical regulator of murine dendritic cell homeostasis. Blood, Vol: 121, Page: 1016-1027

Vardi N., Levy S., Assaf M., Carmi M. & Barkai N. (2013). Budding yeast escape commitment to the phosphate starvation program using gene expression noise. Current Biology, Vol: 23, Page: 2051-2057

Nunes-Xavier C. E., Martin-Perez J., Elson A. & Pulido R. (2013). Protein tyrosine phosphatases as novel targets in breast cancer therapy. Biochimica et Biophysica Acta - Reviews on Cancer, Vol: 1836, Page: 211-226

Olender T., Safran M., Edgar R., Stelzer G., Nativ N., Rosen N., Shtrichman R., Mazor Y., West M. D., Keydar I., Rappaport N., Belinky F., Warshawsky D. & Lancet D. (2013). An overview of synergistic data tools for biological scrutiny. Israel Journal of Chemistry, Vol: 53, Page: 185-198

Lotem J., Levanon D., Negreanu V., Leshkowitz D., Friedlander G. & Groner Y. (2013). Runx3-mediated transcriptional program in cytotoxic lymphocytes. PLoS ONE, Vol: 8

Oz-Levi D., Gelman A., Elazar Z. & Lancet D. (2013). TECPR2:A new autophagy link for neurodegeneration. Autophagy, Vol: 9, Page: 801-802

Gafni O., Weinberger L., Mansour A. A., Manor Y. S., Chomsky E., Ben-Yosef D., Kalma Y., Viukov S., Maza I., Zviran A., Rais Y., Shipony Z., Mukamel Z., Krupalnik V., Zerbib M., Geula S., Caspi I., Schneir D., Shwartz T., Gilad S., Amann Zalcenstein D., Benjamin S., Amit I., Tanay A., Massarwa R., Novershtern N. & Hanna J. (. (2013). Derivation of novel human ground state naive pluripotent stem cells. Nature, Vol: 504, Page: 282-286

Papic D., Elbaz-Alon Y., Koerdt S. N., Leopold K., Worm D., Jung M., Schuldiner M. & Rapaport D. (2013). The role of Djp1 in import of the mitochondrial protein mim1 demonstrates specificity between a cochaperone and its substrate protein. Molecular and Cellular Biology, Vol: 33, Page: 4083-4094

Pasternak Z., Pietrokovski S., Rotem O., Gophna U., Lurie-Weinberger M. N. & Jurkevitch E. (2013). By their genes ye shall know them: Genomic signatures of predatory bacteria. ISME Journal, Vol: 7, Page: 756-769

Pencovich N., Jaschek R., Dicken J., Amit A., Lotem J., Tanay A. & Groner Y. (2013). Cell-Autonomous Function of Runx1 Transcriptionally Regulates Mouse Megakaryocytic Maturation. PLoS ONE, Vol: 8

Mansour A. A. & Hanna J. H. (2013). Oct4 shuffles Sox partners to direct cell fate. EMBO Journal, Vol: 32, Page: 917-919

Gerlitz G., Reiner O. & Bustin M. (2013). Microtubule dynamics alter the interphase nucleus. Cellular and Molecular Life Sciences, Vol: 70, Page: 1255-1268

Geron E., Schejter E. D. & Shilo B. Z. (2013). Directing exocrine secretory vesicles to the apical membrane by actin cables generated by the formin mDia1. Proceedings of the National Academy of Sciences of the United States of America, Vol: 110, Page: 10652-10657

Peters Lee Zeev Z., Hazan R., Breker M., Schuldiner M. & Ben-Aroya S. (2013). Formation and dissociation of proteasome storage granules are regulated by cytosolic pH. Journal of Cell Biology, Vol: 201, Page: 663-671

Gitter A., Carmi M., Barkai N. & Bar-Joseph Z. (2013). Linking the signaling cascades and dynamic regulatory networks controlling stress responses. Genome Research, Vol: 23, Page: 365-376

Powis K., Schrul B., Tienson H., Gostimskaya I., Breker M., High S., Schuldiner M., Jakob U. & Schwappach B. (2013). Get3 is a holdase chaperone and moves to deposition sites for aggregated proteins when membrane targeting is blocked. Journal of Cell Science, Vol: 126, Page: 473-483

Quax T. E. F., Wolf Y. I., Koehorst J. J., Wurtzel O., van der Oost d. O. R., Ran W., Blombach F., Makarova K. S., Brouns S. J. J., Forster A. C., Wagner E. G. H., Sorek R., Koonin E. V. & van der Oost d. O. J. (2013). Differential translation tunes uneven production of operon-encoded proteins. Cell Reports, Vol: 4, Page: 938-944

Rais Y., Zviran A., Geula S., Gafni O., Chomsky E., Viukov S., Mansour A. A., Caspi I., Krupalnik V., Zerbib M., Maza I., Mor N., Baran D., Weinberger L., Jaitin D. A., Lara Astiaso A. D., Blecher-Gonen R., Shipony Z., Mukamel Z., Hagai T., Gilad S., Amann Zalcenstein D., Tanay A., Amit I., Novershtern N. & Hanna J. (. (2013). Deterministic direct reprogramming of somatic cells to pluripotency. Nature, Vol: 502, Page: 65-70

Rappaport N., Nativ N., Stelzer G., Twik M., Guan-Golan Y., Stein T. I., Bahir I., Belinky F., Morrey C. P., Safran M. & Lancet D. (2013). MalaCards: An integrated compendium for diseases and their annotation. Database-The Journal Of Biological Databases And Curation, Vol: 2013

Reiner O. & Sapir T. (2013). LIS1 functions in normal development and disease. Current Opinion in Neurobiology, Vol: 23, Page: 951-956

Reuven N., Adler J., Meltser V. & Shaul Y. (2013). The Hippo pathway kinase Lats2 prevents DNA damage-induced apoptosis through inhibition of the tyrosine kinase c-Abl. Cell Death and Differentiation, Vol: 20, Page: 1330-1340

Gur C., Enk J., Weitman E., Bachar E., Suissa Y., Cohen G., Schyr R. B., Sabanay H., Horwitz E., Glaser B., Dor Y., Pribluda A., Hanna J. H., Leibowitz G. & Mandelboim O. (2013). The Expression of the Beta Cell-Derived Autoimmune Ligand for the Killer Receptor Nkp46 Is Attenuated in Type 2 Diabetes. PLoS ONE, Vol: 8

Rockah-Shmuel L., Toth-Petroczy A., Sela A., Wurtzel O., Sorek R. & Tawfik D. (2013). Correlated Occurrence and Bypass of Frame-Shifting Insertion-Deletions (InDels) to Give Functional Proteins. PLoS Genetics, Vol: 9

Rousso T., Shewan A. M., Mostov K. E., Schejter E. D. & Shilo B. Z. (2013). Apical targeting of the formin diaphanous in Drosophila tubular epithelia. eLife, Vol: 2013

Ruzzo E. K., Oz Levi D., Ben-Asher E., Olender T. & Lancet D. (2013). Deficiency of Asparagine Synthetase Causes Congenital Microcephaly and a Progressive Form of Encephalopathy. Neuron, Vol: 80, Page: 429-441

Harpaz N., Ordan E., Ocorr K., Bodmer R. & Volk T. (2013). Multiplexin Promotes Heart but Not Aorta Morphogenesis by Polarized Enhancement of Slit/Robo Activity at the Heart Lumen. PLoS Genetics, Vol: 9

Hecht K. A., Wytiaz V. A., Ast T., Schuldiner M. & Brodsky J. L. (2013). Characterization of an M28 metalloprotease family member residing in the yeast vacuole. FEMS Yeast Research, Vol: 13, Page: 471-484

Hendriks W. J. A. J., Elson A., Harroch S., Pulido R., Stoker A. & den Hertog J. (2013). Protein tyrosine phosphatases in health and disease. FEBS Journal, Vol: 280, Page: 708-730

Sapir T., Levy T., Sakakibara A., Rabinkov A., Miyata T. & Reiner O. (2013). Shootin1 Acts in Concert with KIF20B to Promote Polarization of Migrating Neurons. Journal of Neuroscience, Vol: 33, Page: 11932-11948

Sberro H., Leavitt A., Kiro R., Koh E., Peleg Y., Qimron U. & Sorek R. (2013). Discovery of Functional Toxin/Antitoxin Systems in Bacteria by Shotgun Cloning. Molecular Cell, Vol: 50, Page: 136-148

Hoffman Y., Dahary D., Bublik D. R., Oren M. & Pilpel Y. (2013). The majority of endogenous microRNA targets within Alu elements avoid the microRNA machinery. Bioinformatics, Vol: 29, Page: 894-902

Schuldiner M. & Schwappach B. (2013). From rags to riches - The history of the endoplasmic reticulum. Biochimica et Biophysica Acta - Molecular Cell Research, Vol: 1833, Page: 2389-2391

Schuldiner M. & Weissman J. S. (2013). The contribution of systematic approaches to characterizing the proteins and functions of the endoplasmic reticulum. Cold Spring Harbor perspectives in biology, Vol: 5

Huang A. H., Riordan T. J., Wang L., Eyal S., Zelzer E., Brigande J. V. & Schweitzer R. (2013). Repositioning forelimb superficialis muscles: Tendon attachment and muscle activity enable active relocation of functional myofibers. Developmental Cell, Vol: 26, Page: 544-551

Sesto N., Wurtzel O., Archambaud C., Sorek R. & Cossart P. (2013). The excludon: a new concept in bacterial antisense RNA-mediated gene regulation. Nature Reviews Microbiology, Vol: 11, Page: 75-82

Shalem O., Carey L., Zeevi D., Sharon E., Keren L., Weinberger A., Dahan O., Pilpel Y. & Segal E. (2013). Measurements of the Impact of 3 End Sequences on Gene Expression Reveal Wide Range and Sequence Dependent Effects. PLoS Computational Biology, Vol: 9

Sharir A., Milgram J., Dubnov-Raz G., Zelzer E. & Shahar R. (2013). A temporary decrease in mineral density in perinatal mouse long bones. Bone, Vol: 52, Page: 197-205

Shilo B. Z. (2013). Conveying principles of embryonic development by metaphors from daily life. Development (Cambridge), Vol: 140, Page: 4827-4829

Antebi Y. E., Reich-Zeliger S., Hart Y., Mayo A., Eizenberg I., Rimer J., Putheti P., Pe'er D. & Friedman N. (2013). Mapping differentiation under mixed culture conditions reveals a tunable continuum of T cell fates.. PLoS Biology, Vol: 11

Ast T., Cohen G. & Schuldiner M. (2013). A network of cytosolic factors targets SRP-independent proteins to the endoplasmic reticulum. Cell, Vol: 152, Page: 1134-1145

Ast T. & Schuldiner M. (2013). All roads lead to Rome (but some may be harder to travel): SRP-independent translocation into the endoplasmic reticulum. Critical Reviews in Biochemistry and Molecular Biology, Vol: 48, Page: 273-288

Avraham N., Soifer I., Carmi M. & Barkai N. (2013). Increasing population growth by asymmetric segregation of a limiting resource during cell division. Molecular Systems Biology, Vol: 9

Barkai N. & Shilo B. Z. (2013). Developmental biology: Segmentation within scale. Nature, Vol: 493, Page: 32-33

Belinky F., Bahir I., Stelzer G., Zimmerman S., Rosen N., Nativ N., Dalah I., Stein T. I., Rappaport N., Mituyama T., Safran M. & Lancet D. (2013). Non-redundant compendium of human ncRNA genes in GeneCards. Bioinformatics, Vol: 29, Page: 255-261

Ben Ami A. O., Friedman D., Leshkowitz D., Goldenberg D., Orlovsky K., Pencovich N., Lotem J., Tanay A. & Groner Y. (2013). Addiction of t(8;21) and inv(16) Acute Myeloid Leukemia to Native RUNX1. Cell Reports, Vol: 4, Page: 1131-1143

Bracha D., Karzbrun E., Shemer G., Pincus P. A. & Bar-Ziv R. (2013). Entropy-driven collective interactions in DNA brushes on a biochip. Proceedings of the National Academy of Sciences of the United States of America, Vol: 110, Page: 4534-4538

Shalek A. K., Satija R., Adiconis X., Gertner R. S., Gaublomme J. T., Raychowdhury R., Schwartz S., Yosef N., Malboeuf C., Lu D., Trombetta J. J., Gennert D., Gnirke A., Goren A., Hacohen N., Levin J. Z., Park H. & Regev A. (2013). Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells. Nature, Vol: 498, Page: 236-240

Antonny B., Audhya J., l Bagnat M., von Blume J., Briggs J. A., Giraudo C., Kaeser P. S., Miller E., Reinisch K., Sbalzarini I. F., Schuldiner M., Shen J., Takamori S., Verstreken P. & Walther T. (2013). Directing traffic into the future.. Developmental Cell, Vol: 27, Page: 480-484

Vomund S., Sapir T., Reiner O., Silva M. A. S. & Korth C. (2013). Generation of topically transgenic rats by in utero electroporation and in vivo bioluminescence screening.. Journal of visualized experiments : JoVE, Page: e50146

Olender T., Nativ N. & Lancet D. (2013). HORDE: Comprehensive resource for olfactory receptor genomics. , Page: 23-38

Levy A. A., Tirosh I., Reikhav S., Bloch Y. & Barkai N. (2013). Yeast Hybrids and Polyploids as Models in Evolutionary Studies. , Page: 1-14

Reuven N. & Shaul Y. (2013). The c-Abl/YAP/p73 apoptotic module and the HIPPO pathway. , Page: 173-195

Reiner O. & Gerlitz G. (2013). Nucleokinesis. , Page: 261-279

Volk T. (2013). Positioning nuclei within the cytoplasm of striated muscle fiber: Cooperation between microtubules and KASH proteins. Nucleus-Austin, Vol: 4, Page: 18-22

Wagner A., Zarecki R., Reshef L., Gochev C., Sorek R., Gophna U. & Ruppin E. (2013). Computational evaluation of cellular metabolic costssuccessfully predicts genes whose expression is deleterious. Proceedings of the National Academy of Sciences of the United States of America, Vol: 110, Page: 19166-19171

Cohen Y., Megyeri M., Chen O. C. W., Condomitti G., Riezman I., Loizides-Mangold U., Abdul-Sada A., Rimon N., Riezman H., Platt F. M., Futerman A. H. & Schuldiner M. (2013). The yeast P5 type ATPase, Spf1, regulates manganese transport into the endoplasmic reticulum. PLoS ONE, Vol: 8

Reiner O. & Karzbrun E. (2020). Nucleokinesis. , Page: 305-322

Mikl M., Pilpel Y. & Segal E. (2020). High-throughput interrogation of programmed ribosomal frameshifting in human cells. Nature Communications, Vol: 11

Cooper-Knock J., Zhang S., Yacovzada N. S., Eitan C., Hornstein E., Fishilevich S. & Lancet D. (2020). Rare Variant Burden Analysis within Enhancers Identifies CAV1 as an ALS Risk Gene. Cell Reports, Vol: 33

Wang Y., Nudel R., Benros M. E., Skogstrand K., Fishilevich S. & Lancet D. (2020). Genome-wide association study identifies 16 genomic regions associated with circulating cytokines at birth. PLoS Genetics, Vol: 16

Povolotsky T. L., Keren-Paz A. & Kolodkin-Gal I. (2020). Metabolic Microenvironments Drive Microbial Differentiation and Antibiotic Resistance. Trends in Genetics, Page: 4-8

Millman A., Bernheim A., Stokar-Avihail A., Fedorenko T., Voichek M., Leavitt A., Oppenheimer-Shaanan Y. & Sorek R. (2020). Bacterial Retrons Function In Anti-Phage Defense. Cell, Vol: 183, Page: 1551-1561

Wong S., Hepowit N. L., Port S. A., Yau R. G., Peng Y., Azad N., Habib A., Harpaz N., Schuldiner M., Hughson F. M., MacGurn J. A. & Weisman L. S. (2020). Cargo Release from Myosin V Requires the Convergence of Parallel Pathways that Phosphorylate and Ubiquitylate the Cargo Adaptor. Current Biology, Vol: 30, Page: 4399-4412

Wiener D. & Schwartz S. (2020). The epitranscriptome beyond m6A. Nature Reviews Genetics, Page: 119-131

Schummer A., Maier R., Gabay-Maskit S., Hansen T., Mühlhäuser W. W., Suppanz I., Fadel A., Schuldiner M., Girzalsky W., Oeljeklaus S., Zalckvar E., Erdmann R. & Warscheid B. (2020). Pex14p Phosphorylation Modulates Import of Citrate Synthase 2 Into Peroxisomes in Saccharomyces cerevisiae. Frontiers in Cell and Developmental Biology, Vol: 8, Page: 549451-549451

Hou Q. & Kolodkin-Gal I. (2020). Harvesting the complex pathways of antibiotic production and resistance of soil bacilli for optimizing plant microbiome. FEMS Microbiology Ecology, Vol: 96

Fenech E. J., Ben-Dor S. & Schuldiner M. (2020). Double the Fun, Double the Trouble: Paralogs and Homologs Functioning in the Endoplasmic Reticulum. Annual Review of Biochemistry, Vol: 89, Page: 637-666

Dasgupta S. & Gerst J. E. (2020). A protocol for non-biased identification of RNAs transferred between heterologous mammalian cell types using rna tagging, cell sorting, and sequencing. , Page: 195-214

Avitan-Hersh E., Feng Y., Oknin Vaisman A., Abu Ahmad Y., Zohar Y., Zhang T., Lee J. S., Lazar I., Sheikh Khalil S., Feiler Y., Kluger H., Kahana C., Brown K., Ruppin E., Ronai Z. A. & Orian A. (2020). Regulation of eIF2α by RNF4 Promotes Melanoma Tumorigenesis and Therapy Resistance. Journal of Investigative Dermatology, Page: 2466-2477

Voichek M., Maaß S., Kroniger T., Becher D. & Sorek R. (2020). Peptide-based quorum sensing systems in Paenibacillus polymyxa. Life Science Alliance, Vol: 3

Hofmeister B. T., Denkena J., Colomé-Tatché M., Shahryary Y., Hazarika R., Grimwood J., Mamidi S., Jenkins J., Grabowski P. P., Sreedasyam A., Shu S., Barry K., Lail K., Adam C., Lipzen A., Sorek R., Kudrna D., Talag J., Wing R., Hall D. W., Jacobsen D., Tuskan G. A., Schmutz J., Johannes F. & Schmitz R. J. (2020). A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa. Genome Biology, Vol: 21, Page: 259

Lopatina A., Tal N. & Sorek R. (2020). Abortive Infection: Bacterial Suicide as an Antiviral Immune Strategy. Annual Review of Virology, Vol: 7, Page: 371-384

Reiner O., Sapir T. & Parichha A. (2020). Using multi-organ culture systems to study Parkinsons disease. Molecular Psychiatry, Page: 725-735

Gabay-Maskit S., Cruz-Zaragoza L. D., Shai N., Eisenstein M., Bibi C., Cohen N., Hansen T., Yifrach E., Harpaz N., Belostotsky R., Schliebs W., Schuldiner M., Erdmann R. & Zalckvar E. (2020). A piggybacking mechanism enables peroxisomal localization of the glyoxylate cycle enzyme Mdh2 in yeast. Journal of Cell Science, Vol: 133

Rajewsky N., Almouzni G., Amit I., Tanay A. & Reiner O. (2020). LifeTime and improving European healthcare through cell-based interceptive medicine. Nature, Vol: 587, Page: 377-386

Slomka S., Françoise I., Hornung G., Asraf O., Biniashvili T., Pilpel Y. & Dahan O. (2020). Experimental evolution of bacillus subtilis reveals the evolutionary dynamics of horizontal gene transfer and suggests adaptive and neutral effects. Genetics, Vol: 216, Page: 543-558

Hoffmann S., Terhorst T. M. E., Singh R. K., Kuemmel D., Pietrokovski S. & Mootz H. D. (2020). Biochemical and Structural Characterization of an Unusual and Naturally Split Class 3 Intein. ChemBioChem, Page: 364-373

Morehouse B. R., Govande A. A., Millman A., Keszei A. F. A., Lowey B., Ofir G., Shao S., Sorek R. & Kranzusch P. J. (2020). STING cyclic dinucleotide sensing originated in bacteria. Nature, Vol: 586, Page: 429-433

Rosenthal M., Metzl-Raz E., Buergi J., Yifrach E., Drwesh L., Fadel A., Peleg Y., Rapaport D., Wilmanns M., Barkai N., Schuldiner M. & Zalckvar E. (2020). Uncovering targeting priority to yeast peroxisomes using an in-cell competition assay. Proceedings of the National Academy of Sciences of the United States of America, Vol: 117, Page: 21432-21440

Metzl-Raz E., Kafri M., Yaakov G. & Barkai N. (2020). Gene Transcription as a Limiting Factor in Protein Production and Cell Growth. G3: Genes, Genomes, Genetics, Vol: 10, Page: 3229-3242

Arama E., Baena-Lopez L. A. & Fearnhead H. O. (2020). Non-lethal message from the Holy Land: The first international conference on nonapoptotic roles of apoptotic proteins. FEBS Journal

Lasman L., Krupalnik V., Viukov S., Mor N., Aguilera-Castrejon A., Schneir D., Bayerl J., Mizrahi O., Peles S., Tawil S., Sathe S., Nachshon A., Shani T., Zerbib M., Kilimnik I., Aigner S., Shankar A., Mueller J. R., Schwartz S., Stern-Ginossar N., Yeo G. W., Geula S., Novershtern N. & Hanna J. H. (2020). Context-dependent functional compensation between Ythdf m6A reader proteins. Genes and Development, Vol: 34, Page: 1373-1391

Oegema R., Barakat T. S., Wilke M., Stouffs K., Amrom D., Aronica E., Bahi-Buisson N., Conti V., Fry A. E., Geis T., Gomez Andres D., Parrini E., Pogledic I., Said E., Soler D., Valor L. M., Zaki M. S., Mirzaa G., Dobyns W. B., Reiner O., Guerrini R., Pilz D. T., Hehr U., Leventer R. J., Jansen A. C., Mancini G. M. S. & Di Donato N. (2020). International consensus recommendations on the diagnostic work-up for malformations of cortical development. Nature Reviews Neurology, Vol: 16, Page: 618-635

Millman A., Melamed S., Amitai G. & Sorek R. (2020). Diversity and classification of cyclic-oligonucleotide-based anti-phage signalling systems. Nature Microbiology, Vol: 5, Page: 1608-1615

Izrael M., Slutsky S. G. & Revel M. (2020). Rising Stars: Astrocytes as a Therapeutic Target for ALS Disease. Frontiers in Neuroscience, Vol: 14

Brodsky S., Jana T., Mittelman K., Chapal M., Kumar D. K., Carmi M. & Barkai N. (2020). Intrinsically Disordered Regions Direct Transcription Factor In Vivo Binding Specificity. Molecular Cell, Vol: 79, Page: 459-471

Colaco A., Fernandez-Suarez M. E., Shepherd D., Gal L., Bibi C., Chuartzman S., Diot A., Morten K., Eden E., Porter F. D., Poulton J., Platt N., Schuldiner M. & Platt F. M. (2020). Unbiased yeast screens identify cellular pathways affected in Niemann-Pick disease type C. Life Science Alliance, Vol: 3

Marmor-Kollet H., Siany A., Kedersha N., Knafo N., Rivkin N., Danino Y. M., Moens T. G., Olender T., Sheban D., Cohen N., Dadosh T., Addadi Y., Ravid R., Eitan C., Toth Cohen B., Hofmann S., Riggs C. L., Advani V. M., Higginbottom A., Cooper-Knock J., Hanna J. H., Merbl Y., Van Den Bosch L., Anderson P., Ivanov P., Geiger T. & Hornstein E. (2020). Spatiotemporal Proteomic Analysis of Stress Granule Disassembly Using APEX Reveals Regulation by SUMOylation and Links to ALS Pathogenesis. Molecular Cell, Vol: 80, Page: 876-891

Tsvetkov P., Myers N., Adler J. & Shaul Y. (2020). Degradation of intrinsically disordered proteins by the nadh 26s proteasome. Biomolecules, Vol: 10

Cui C., Liu Y., Gerloff D., Rohde C., Pauli C., Koehn M., Misiak D., Oellerich T., Schwartz S., Schmidt L., Wiewrodt R., Marra A., Hillejan L., Bartel F., Wickenhauser C., Huettelmaier S., Goellner S., Zhou F., Edemir B. & Mueller-Tidow C. (2020). NOP10 predicts lung cancer prognosis and its associated small nucleolar RNAs drive proliferation and migration. Oncogene, Vol: 40, Page: 909-921

Aharon-Hefetz N., Frumkin I., Mayshar Y., Dahan O., Pilpel Y. & Rak R. (2020). Manipulation of the human tRNA pool reveals distinct tRNA sets that act in cellular proliferation or cell cycle arrest. eLife, Vol: 9

Shulman Z. & Stern-Ginossar N. (2020). The RNA modification N6-methyladenosine as a novel regulator of the immune system. Nature Immunology, Vol: 21, Page: 501-512

Wu Y., Chou T., Young L., Hsieh F., Pan H., Mo S., Brown S. B., Chen R., Kimchi A. & Lai M. (2020). Tumor suppressor death-associated protein kinase 1 inhibits necroptosis by p38 MAPK activation. Cell Death & Disease, Vol: 11

Sas-Chen A., Thomas J. M., Matzov D., Taoka M., Nance K. D., Nir R., Bryson K. M., Shachar R., Liman G. L. S., Burkhart B. W., Gamage S. T., Nobe Y., Briney C. A., Levy M. J., Fuchs R. T., Robb G. B., Hartmann J., Sharma S., Lin Q., Florens L., Washburn M. P., Isobe T., Santangelo T. J., Shalev-Benami M., Meier J. L. & Schwartz S. (2020). Dynamic RNA acetylation revealed by quantitative cross-evolutionary mapping. Nature, Vol: 583, Page: 638-643

Hosokawa H., Romero-Wolf M., Yang Q., Motomura Y., Levanon D., Groner Y., Moro K., Tanaka T. & Rothenberg E. (2020). Cell type-specific actions of Bcl11b in early T-lineage and group 2 innate lymphoid cells. Journal of Experimental Medicine, Vol: 217

Magdalon J., Mansur F., Teles e Silva A. L., de Goes V. A., Reiner O. & Sertie A. L. (2020). Complement System in Brain Architecture and Neurodevelopmental Disorders. Frontiers in Neuroscience, Vol: 14

Das S., Koyano-Nakagawa N., Gafni O., Maeng G., Singh B. N., Rasmussen T., Pan X., Choi K., Mickelson D., Gong W., Pota P., Weaver C. V., Kren S., Hanna J. H., Yannopoulos D., Garry M. G. & Garry D. J. (2020). Generation of human endothelium in pig embryos deficient in ETV2. Nature Biotechnology, Vol: 38, Page: 297-302

Shnayder M., Nachshon A., Rozman B., Bernshtein B., Lavi M., Fein N., Poole E., Avdic S., Blyth E., Gottlieb D., Abendroth A., Slobedman B., Sinclair J., Stern-Ginossar N. & Schwartz M. (2020). Single cell analysis reveals human cytomegalovirus drives latently infected cells towards an anergic-like monocyte state. eLife, Vol: 9

Saladi S., Boos F., Poglitsch M., Meyer H., Sommer F., Muehlhaus T., Schroda M., Schuldiner M., Madeo F. & Herrmann J. M. (2020). The NADH Dehydrogenase Nde1 Executes Cell Death after Integrating Signals from Metabolism and Proteostasis on the Mitochondrial Surface. Molecular Cell, Vol: 77, Page: 189-202

Bernheim A. & Sorek R. (2020). The pan-immune system of bacteria: antiviral defence as a community resource. Nature Reviews Microbiology, Vol: 18, Page: 113-119

Bar-Ziv R., Brodsky S., Chapal M. & Barkai N. (2020). Transcription Factor Binding to Replicated DNA. Cell Reports, Vol: 30, Page: 3989-3995

Barkai N. & Shilo B. Z. (2020). Reconstituting tissue patterning: A synthetic morphogen reveals quantitative principles of tissue patterning. Science (New York, N.Y.), Vol: 370, Page: 292-293

Unnikannan C. P., Reuveny A., Grunberg D. & Volk T. (2020). Recruitment of BAF to the nuclear envelope couples the LINC complex to endoreplication. Development, Vol: 147

Tavor S., Shalit T., Chapal Ilani N., Moskovitz Y., Livnat N., Groner Y., Barr H., Minden M. D., Plotnikov A., Deininger M. W., Kaushansky N. & Shlush L. I. (2020). Dasatinib response in acute myeloid leukemia is correlated with FLT3/ITD, PTPN11 mutations and a unique gene expression signature. Haematologica, Vol: 105, Page: 2795-2804

Finkel Y., Mizrahi O., Nachshon A., Weingarten-Gabbay S., Morgenstern D., Yahalom-Ronen Y., Tamir H., Achdout H., Stein D., Israeli O., Beth-Din A., Melamed S., Weiss S., Israely T., Paran N., Schwartz M. & Stern-Ginossar N. (2020). The coding capacity of SARS-CoV-2. Nature, Vol: 589, Page: 125-130

Krieger G., Lupo O., Levy A. A. & Barkai N. (2020). Independent evolution of transcript abundance and gene regulatory dynamics. Genome Research, Vol: 30, Page: 1000-1011

Zhang M., Lai Y., Krupalnik V., Guo P., Guo X., Zhou J., Xu Y., Yu Z., Liu L., Jiang A., Li W., Ma G., Li N., Fu X., Lv Y., Jiang M., Tariq M., Kanwal S., Liu H., Xu X., Zhang H., Huang Y., Wang L., Chen S., Babarinde I. A., Luo Z., Wang D., Zhou T., Ward C., He M., Ibanez D. P., Li Y., Zhou J., Yuan J., Feng Y., Arumugam K., Di Vicino U., Bao X., Wu G., Schambach A., Wang H., Sun H., Gao F., Qin B., Hutchins A. P., Doble B. W., Hartmann C., Cosma M. P., Qin Y., Xu G., Chen R., Volpe G., Chen L., Hanna J. H. & Esteban M. A. (2020). beta-Catenin safeguards the ground state of mouse pluripotency by strengthening the robustness of the transcriptional apparatus. Science Advances, Vol: 6

Lorber D., Rotkopf R. & Volk T. (2020). A minimal constraint device for imaging nuclei in live Drosophila contractile larval muscles reveals novel nuclear mechanical dynamics: Drosophila contractile larval muscles reveals novel nuclear mechanical dynamics. Lab on a Chip, Vol: 20, Page: 2100-2112

Zung N. & Schuldiner M. (2020). New horizons in mitochondrial contact site research. Biological Chemistry, Vol: 401, Page: 793-809

Omar M. I., Roobol M. J., Ribal M. J., Abbott T. & Lancet D. (2020). Introducing PIONEER: a project to harness big data in prostate cancer research. Nature Reviews Urology, Vol: 17, Page: 351-361

Assaraf E., Blecher R., Heinemann-Yerushalmi L., Krief S., Carmel Vinestock R., Biton I. E., Brumfeld V., Rotkopf R., Avisar E., Agar G. & Zelzer E. (2020). Piezo2 expressed in proprioceptive neurons is essential for skeletal integrity. Nature Communications, Vol: 11

Hantisteanu S., Dicken Y., Negreanu V., Goldenberg D., Brenner O., Leshkowitz D., Lotem J., Levanon D. & Groner Y. (2020). Runx3 prevents spontaneous colitis by directing the differentiation of anti-inflammatory mononuclear phagocytes. PLoS ONE, Vol: 15

Ha T. W., Jeong J. H., Shin H., Kim H. K., Im J. S., Song B. H., Hanna J., Oh J. S., Woo D., Han J. & Lee M. R. (2020). Characterization of Endoplasmic Reticulum (ER) in Human Pluripotent Stem Cells Revealed Increased Susceptibility to Cell Death upon ER Stress. Cells, Vol: 9

Wang Y., Yuan P., Grabon A., Tripathi A., Lee D., Rodriguez M., Lonnfors M., Eisenberg-Bord M., Wang Z., Lam S. M., Schuldiner M. & Bankaitis V. A. (2020). Noncanonical regulation of phosphatidylserine metabolism by a Sec14-like protein and a lipid kinase. Journal of Cell Biology, Vol: 219

Olender T., Jones T. E. M., Bruford E. & Lancet D. (2020). A unified nomenclature for vertebrate olfactory receptors. BMC Evolutionary Biology, Vol: 20, Page: 42

Lasman L., Hanna J. H. & Novershtern N. (2020). Role of m(6)A in Embryonic Stem Cell Differentiation and in Gametogenesis. Epigenomes, Vol: 4

Tai-Schmiedel J., Karniely S., Lau B., Ezra A., Eliyahu E., Nachshon A., Kerr K., Suárez N., Schwartz M., Davison A. J. & Stern-Ginossar N. (2020). Human cytomegalovirus long noncoding RNA4.9 regulates viral DNA replication. PLoS Pathogens, Vol: 16

Stein M., Barnea-Zohar M., Shalev M., Arman E., Brenner O., Winograd-Katz S., Gerstung J., Thalji F., Kanaan M., Elinav H., Stepensky P., Geiger B., Tuckermann J. & Elson A. (2020). Massive osteopetrosis caused by non-functional osteoclasts in R51Q SNX10 mutant mice. Bone, Vol: 136

Le-trilling V. T. K., Becker T., Nachshon A., Stern-ginossar N., Schöler L., Voigt S., Hengel H. & Trilling M. (2020). The Human Cytomegalovirus pUL145 Isoforms Act as Viral DDB1-Cullin-Associated Factors to Instruct Host Protein Degradation to Impede Innate Immunity. Cell Reports, Vol: 30, Page: 2248-2260

Rahimi N., Carmon S., Averbukh I., Khajouei F., Sinha S., Schejter E. D., Barkai N. & Shilo B. (2020). Global shape of Toll activation is determined by wntD enhancer properties. Proceedings of the National Academy of Sciences of the United States of America, Vol: 117, Page: 1552-1558

Finkel Y., Schmiedel D., Tai-Schmiedel J., Nachshon A., Winkler R., Dobesova M., Schwartz M., Mandelboim O. & Stern-Ginossar N. (2020). Comprehensive annotations of human herpesvirus 6A and 6B genomes reveal novel and conserved genomic features. eLife, Vol: 9

Gur D., Bain E. J., Johnson K. R., Aman A. J., Pasoili H. A., Flynn J. D., Allen M. C., Deheyn D. D., Lee J. C., Lippincott-Schwartz J. & Parichy D. M. (2020). In situ differentiation of iridophore crystallotypes underlies zebrafish stripe patterning. Nature Communications, Vol: 11

Bykov Y. S., Rapaport D., Herrmann J. M. & Schuldinert M. (2020). Cytosolic Events in the Biogenesis of Mitochondrial Proteins. Trends in Biochemical Sciences, Vol: 45, Page: 650-667

Tazelaar G. H., Boeynaems S., De Decker M., van Vugt J. J., Kool L., Goedee H. S., McLaughlin R. L., Sproviero W., Iacoangeli A., Moisse M., Jacquemyn M., Daelemans D., Dekker A. M., van der Spek R. A., Westeneng H. J., Kenna K. P., Assialioui A., Silva N. D., Eitan C. & Hornstein E. (2020). ATXN1 repeat expansions confer risk for amyotrophic lateral sclerosis and contribute to TDP-43 mislocalization. Brain Communications, Vol: 2

Ben-Reuven L. & Reiner O. (2020). Toward spatial identities in human brain organoids-on-chip induced by morphogen-soaked beads. Bioengineering, Vol: 7, Page: 1-17

Benitez E. K., Lomova Kaufman A., Cervantes L., Clark D. N., Ayoub P. G., Senadheera S., Osborne K., Sanchez J. M., Crisostomo R. V., Wang X., Reuven N., Shaul Y., Hollis R. P., Romero Z. & Kohn D. B. (2020). Global and Local Manipulation of DNA Repair Mechanisms to Alter Site-Specific Gene Editing Outcomes in Hematopoietic Stem Cells. Frontiers in Genome Editing, Vol: 2

Reiner O. & Karzbrun E. (2020). Brain organoids as a model system for human neurodevelopment in health and disease. , Page: 205-221

Coenen-Stass A. M. L., Magen I., Brooks T., Ben-Dov I. Z., Greensmith L., Hornstein E. & Fratta P. (2018). Evaluation of methodologies for microRNA biomarker detection by next generation sequencing. RNA Biology, Vol: 15, Page: 1133-1145

Shnayder M., Nachshon A., Krishn B., Poole E., Boshkov A., Binyamin A., Maza I., Sinclair J., Schwartz M. & Stern-Ginossar N. (2018). Defining the Transcriptional Landscape during Cytomegalovirus Latency with Single-Cell RNA Sequencing. mBio, Vol: 9

Eisenberg-Bord M., Mari M., Weill U., Rosenfeld-Gur E., Moldavski O., Castro I. G., Soni K. G., Harpaz N., Levine T. P., Futerman A. H., Reggiori F., Bankaitis V. A., Schuldiner M. & Bohnert M. (2018). Identification of seipin-linked factors that act as determinants of a lipid droplet subpopulation. Journal of Cell Biology, Vol: 217, Page: 269-282

Palmer B. A., Gur D., Weiner S., Addadi L. & Oron D. (2018). The Organic Crystalline Materials of Vision: Structure-Function Considerations from the Nanometer to the Millimeter Scale. Advanced Materials, Vol: 30

Tsarfati Y., Rosenne S., Weissman H., Shimon L. J. W., Gur D., Palmer B. A. & Rybtchinski B. (2018). Crystallization of Organic Molecules: Nonclassical Mechanism Revealed by Direct Imaging. ACS Central Science, Vol: 4, Page: 1031-1036

Gur D., Nicolas J., Brumfeld V., Bar-Elli O., Oron D. & Levkowitz G. (2018). The Dual Functional Reflecting Iris of the Zebrafish. Advanced Science, Vol: 5

Kariko S., Timonen J. V. I., Weaver J. C., Gur D., Marks C., Leiserowitz L., Kolle M. & Li L. (2018). Structural origins of coloration in the spider Phoroncidia rubroargentea Berland, 1913 (Araneae:Theridiidae) from Madagascar. Journal of the Royal Society Interface, Vol: 15

Radzinski M., Fassler R., Yogev O., Breuer W., Shai N., Gutin J., Ilyas S., Geffen Y., Tsytkin-Kirschenzweig S., Nahmias Y., Ravid T., Friedman N., Shuldiner M. & Reichmann D. (2018). Temporal profiling of redox-dependent heterogeneity in single cells. eLife, Vol: 7

De Brouwer A. P. M., Abou Jamra R., Koertel N., Soyris C., Polla D. L., Safra M., Zisso A., Powell C. A., Rebelo-Guiomar P., Dinges N., Morin V., Stock M., Hussain M., Shahzad M., Riazuddin S., Ahmed Z. M., Pfundt R., Schwarz F., de Boer L., Reis A., Grozeva D., Raymond F. L., Riazuddin S., Koolen D. A., Minczuk M., Roignant J., van Bokhoven H. & Schwartz S. (2018). Variants in PUS7 Cause Intellectual Disability with Speech Delay, Microcephaly, Short Stature, and Aggressive Behavior. American Journal of Human Genetics, Vol: 103, Page: 1045-1052

Engel M., Eggert C., Kaplick P. M., Eder M., Roeh S., Tietze L., Namendorf C., Arloth J., Weber P., Rex-Haffner M., Geula S., Jakovcevski M., Hanna J. H., Leshkowitz D., Uhr M., Wotjak C. T., Schmidt M. V., Deussing J. M., Binder E. B. & Chen A. (2018). The Role of m(6)A/m-RNA Methylation in Stress Response Regulation. Neuron, Vol: 99, Page: 389-403.e9

Shai N., Yifrach E., van Roermund C. W. T., Cohen N., Bibi C., Ijlst L., Cavellini L., Meurisse J., Schuster R., Zada L., Mari M. C., Reggiori F. M., Hughes A. L., Escobar-Henriques M., Cohen M. M., Waterham H. R., Wanders R. J. A., Schuldiner M. & Zalckvar E. (2018). Systematic mapping of contact sites reveals tethers and a function for the peroxisome-mitochondria contact. Nature Communications, Vol: 9

Frumkin I., Lajoie M. J., Gregg C. J., Hornung G., Church G. M. & Pilpel Y. (2018). Codon usage of highly expressed genes affects proteome-wide translation efficiency. Proceedings Of The National Academy Of Sciences Of The United States Of America-Biological Sciences, Vol: 115, Page: E4940-E4949

Gamliel M., Goldman-Wohl D., Isaacson B., Gur C., Stein N., Yamin R., Berger M., Grunewald M., Keshet E., Rais Y., Bornstein C., David E., Jelinski A., Eisenberg I., Greenfield C., Ben-David A., Imbar T., Gilad R., Haimov-Kochman R., Mankuta D., Elami-Suzin M., Amit I., Hanna J. H., Yagel S. & Mandelboim O. (2018). Trained Memory of Human Uterine NK Cells Enhances Their Function in Subsequent Pregnancies. Immunity, Vol: 48, Page: 951-962.e5

Karzbrun E., Kshirsagar A., Cohen S. R., Hanna J. H. & Reiner O. (2018). Human brain organoids on a chip reveal the physics of folding. Nature Physics, Vol: 14, Page: 515-522

Ofir G. & Sorek R. (2018). Contemporary Phage Biology: From Classic Models to New Insights. Cell, Vol: 172, Page: 1260-1270

Heimer G., Eyal E., Zhu X., Ruzzo E. K., Marek-Yagel D., Sagiv D., Anikster Y., Reznik-Wolf H., Pras E., Levi D. O., Lancet D., Ben-Zeev B. & Nissenkorn A. (2018). Mutations in AIFM1 cause an X-linked childhood cerebellar ataxia partially responsive to riboflavin. European Journal of Paediatric Neurology, Vol: 22, Page: 93-101

Galluzzi L., Vitale I., Aaronson S. A., Abrams J. M., Adam D., Agostinis P., Alnemri E. S., Altucci L., Amelio I., Andrews D. W., Annicchiarico-Petruzzelli M., Antonov A. V., Arama E., Baehrecke E. H., Barlev N. A., Bazan N. G., Bernassola F., Bertrand M. J. M., Bianchi K., Blagosklonny M. V., Blomgren K., Borner C., Boya P., Brenner C., Campanella M., Candi E., Carmona-Gutierrez D., Cecconi F., Chan F. K. -., Chandel N. S., Cheng E. H., Chipuk J. E., Cidlowski J. A., Ciechanover A., Cohen G. M., Conrad M., Cubillos-Ruiz J. R., Czabotar P. E., D'Angiolella V., Dawson T. M., Dawson V. L., De laurenzi V., De Maria R., Debatin K., DeBerardinis R. J., Deshmukh M., Gross A., Kimchi A., Oren M. & Wallach D. (2018). Molecular mechanisms of cell death: recommendations of the Nomenclature Committee on Cell Death 2018. Cell Death and Differentiation, Vol: 25, Page: 486-541

Jafarnejad S. M., Chapat C., Matta-Camacho E., Gelbart I. A., Hesketh G. G., Arguello M., Garzia A., Kim S., Attig J., Shapiro M., Morita M., Khoutorsky A., Alain T., Christos G. G., Stern-Ginossar N., Tuschl T., Gingras A., Duchaine T. F. & Sonenberg N. (2018). Translational control of ERK signaling through miRNA/4EHP-directed silencing. eLife, Vol: 7

Glasner A., Levi A., Enk J., Isaacson B., Viukov S., Orlanski S., Scope A., Neuman T., Enk C. D., Hanna J. H., Sexl V., Jonjic S., Seliger B., Zitvogel L. & Mandelboim O. (2018). NKp46 Receptor-Mediated Interferon-gamma Production by Natural Killer Cells Increases Fibronectin 1 to Alter Tumor Architecture and Control Metastasis. Immunity, Vol: 48, Page: 107-+

Ofir G., Melamed S., Sberro H., Mukamel Z., Silverman S., Yaakov G., Doron S. & Sorek R. (2018). DISARM is a widespread bacterial defence system with broad anti-phage activities. Nature Microbiology, Vol: 3, Page: 90-98

Kahana C. (2018). The antizyme family for regulating polyamines. Journal of Biological Chemistry, Vol: 293, Page: 18730-18735

Dar D. & Sorek R. (2018). Bacterial Noncoding RNAs Excised from within Protein-Coding Transcripts. mBio, Vol: 9

Gerst J. E. (2018). Pimp My Ribosome: Ribosomal Protein Paralogs Specify Translational Control. Trends in Genetics, Vol: 34, Page: 832-845

Bialik S., Dasari S. K. & Kimchi A. (2018). Autophagy-dependent cell death: where, how and why a cell eats itself to death. Journal of Cell Science, Vol: 131

Shammai A., Petreikov M., Yeselson Y., Faigenboim A., Moy-Komemi M., Cohen S., Cohen D., Besaulov E., Efrati A., Houminer N., Bar M., Ast T., Schuldiner M., Klemens P. A. W., Neuhaus E., Baxter C. J., Rickett D., Bonnet J., White R., Giovannoni J. J., Levin I. & Schaffer A. (2018). Natural genetic variation for expression of a SWEET transporter among wild species of Solanum lycopersicum (tomato) determines the hexose composition of ripening tomato fruit. Plant Journal, Vol: 96, Page: 343-357

Hansen K. G., Aviram N., Laborenz J., Bibi C., Meyer M., Spang A., Schuldiner M. & Herrmann J. M. (2018). An ER surface retrieval pathway safeguards the import of mitochondrial membrane proteins in yeast. Science, Vol: 361, Page: 1118-1122

Dar D. & Sorek R. (2018). High-resolution RNA 3'-ends mapping of bacterial Rho-dependent transcripts. Nucleic Acids Research, Vol: 46, Page: 6797-6805

Lee J. S., Adler L., Karathia H., Carmel N., Rabinovich S., Auslander N., Keshet R., Stettner N., Silberman A., Agemy L., Helbling D., Eilam R., Sun Q., Brandis A., Malitsky S., Itkin M., Weiss H., Pinto S., Kalaora S., Levy R., Barnea E., Admon A., Dimmock D., Stern-Ginossar N., Scherz A., Nagamani S. C. S., Unda M., Wilson D. M., Elhasid R., Carracedo A., Samuels Y., Hannenhalli S., Ruppin E. & Erez A. (2018). Urea Cycle Dysregulation Generates Clinically Relevant Genomic and Biochemical Signatures. Cell, Vol: 174, Page: 1559-1570

Lancet D., Zidovetzki R. & Markovitch O. (2018). Systems protobiology: origin of life in lipid catalytic networks. Journal of the Royal Society Interface, Vol: 15

Weill U., Yofe I., Sass E., Stynen B., Davidi D., Natarajan J., Ben-Menachem R., Avihou Z., Goldman O., Harpaz N., Chuartzman S., Kniazev K., Knoblach B., Laborenz J., Boos F., Kowarzyk J., Ben-Dor S., Zalckvar E., Herrmann J. M., Rachubinski R. A., Pines O., Rapaport D., Michnick S. W., Levy E. D. & Schuldiner M. (2018). Genome-wide SWAp-Tag yeast libraries for proteome exploration. Nature Methods, Vol: 15, Page: 617-622

Bohnert M. & Schuldiner M. (2018). Stepping outside the comfort zone of membrane contact site research. Nature Reviews Molecular Cell Biology, Vol: 19, Page: 483-484

Felsenthal N., Rubin S., Stern T., Krief S., Pal D., Pryce B. A., Schweitzer R. & Zelzer E. (2018). Development of migrating tendon-bone attachments involves replacement of progenitor populations. Development, Vol: 145

Weill U., Arakel E. C., Goldmann O., Golan M., Chuartzman S., Munro S., Schwappach B. & Schuldiner M. (2018). Toolbox: Creating a systematic database of secretory pathway proteins uncovers new cargo for COPI. Traffic, Vol: 19, Page: 370-379

Duval M., Dar D., Carvalho F., Rocha E. P. C., Sorek R. & Cossart P. (2018). HflXr, a homolog of a ribosome-splitting factor, mediates antibiotic resistance. Proceedings of the National Academy of Sciences of the United States of America, Vol: 115, Page: 13359-13364

Barnea M., Stein M., Winograd-Katz S., Shalev M., Arman E., Brenner O., Thalji F., Kanaan M., Elinav H., Stepensky P., Geiger B., Tuckermann J. & Elson A. (2018). R51Q SNX10 induces osteopetrosis by promoting uncontrolled fusion of monocytes to form giant, non-functional osteoclasts. BioRxiv

Karzbrun E., Tshuva R. Y. & Reiner O. (2018). An On-Chip Method for Long-Term Growth and Real-Time Imaging of Brain Organoids. Current Protocols in Cell Biology, Vol: 81

Haimovich G. & Gerst J. E. (2018). Single-molecule Fluorescence in situ Hybridization (smFISH) for RNA Detection in Adherent Animal Cells. Bio-Protocol, Vol: 8

Noiman T. & Kahana C. (2018). A Simple Combined Use of CRISPR-Cas9 and Cre-LoxP Technologies for Generating Conditional Gene Knockouts in Mammalian Cells. CRISPR Journal, Vol: 1, Page: 278-285

Jonas F., Soifer I. & Barkai N. (2018). A Visual Framework for Classifying Determinants of Cell Size. Cell Reports, Vol: 25, Page: 3519-3529.e2

Averbukh I., Lai S., Doe C. Q. & Barkai N. (2018). A repressor-decay timer for robust temporal patterning in embryonic Drosophila neuroblast lineages. eLife, Vol: 7

Mizrahi O., Nachshon A., Shitrit A., Gelbart I. A., Dobesova M., Brenner S., Kahana C. & Stern-Ginossar N. (2018). Virus-Induced Changes in mRNA Secondary Structure Uncover cis-Regulatory Elements that Directly Control Gene Expression. Molecular Cell, Vol: 72, Page: 862-874

Bahat A., Goldman A., Zaltsman Y., Khan D. H., Halperin C., Amzallag E., Krupalnik V., Mullokandov M., Silberman A., Erez A., Schimmer A. D., Hanna J. H. & Gross A. (2018). MTCH2-mediated mitochondrial fusion drives exit from naive pluripotency in embryonic stem cells. Nature Communications, Vol: 9

Salaroglio I. C., Gazzano E., Abdullrahman A., Mungo E., Castella B., Abd-elrahman G. E. F. A., Massaia M., Donadelli M., Rubinstein M., Riganti C. & Kopecka J. (2018). Increasing intratumor C/EBP- LIP and nitric oxide levels overcome resistance to doxorubicin in triple negative breast cancer. Journal Of Experimental & Clinical Cancer Research, Vol: 37

Reuveny A., Shnayder M., Lorber D., Wang S. & Volk T. (2018). Ma2/d promotes myonuclear positioning and association with the sarcoplasmic reticulum. Development, Vol: 145

Myers N., Olender T., Savidor A., Levin Y., Reuven N. & Shaul Y. (2018). The Disordered Landscape of the 20S Proteasome Substrates Reveals Tight Association with Phase Separated Granules. Proteomics, Vol: 18

Bar-Yaacov D., Pilpel Y. & Dahan O. (2018). RNA editing in bacteria: occurrence, regulation and significance. RNA Biology, Vol: 15, Page: 863-867

Uzquiano A., Gladwyn-Ng I., Nguyen L., Reiner O., Goetz M., Matsuzaki F. & Francis F. (2018). Cortical progenitor biology: key features mediating proliferation versus differentiation. Journal of Neurochemistry, Vol: 146, Page: 500-525

Blecher R., Heinemann-Yerushalmi L., Assaraf E., Konstantin N., Chapman J. R., Cope T. C., Bewick G. S., Banks R. W. & Zelzer E. (2018). New functions for the proprioceptive system in skeletal biology. Philosophical Transactions of the Royal Society B: Biological Sciences, Vol: 373

Mor N., Rais Y., Sheban D., Peles S., Aguilera-Castrejon A., Zviran A., Elinger D., Viukov S., Geula S., Krupalnik V., Zerbib M., Chomsky E., Lasman L., Shani T., Bayerl J., Gafni O., Hanna S., Buenrostro J. D., Hagai T., Masika H., Vainorius G., Bergman Y., Greenleaf W. J., Esteban M. A., Elling U., Levin Y., Massarwa R., Merbl Y., Novershtern N. & Hanna J. H. (2018). Neutralizing Gatad2a-Chd4-Mbd3/NuRD Complex Facilitates Deterministic Induction of Naive Pluripotency. Cell Stem Cell, Vol: 23, Page: 412-425

Sapir T., Levy T., Kozer N., Shin I., Zamor V., Haffner-Krausz R., McGlade J. C. & Reiner O. (2018). Notch Activation by Shootin1 Opposing Activities on 2 Ubiquitin Ligases. Cerebral Cortex, Vol: 28, Page: 3115-3128

Schwartz S. (2018). m(1)A within cytoplasmic mRNAs at single nucleotide resolution: a reconciled transcriptome-wide map. Rna-A Publication Of The Rna Society, Vol: 24, Page: 1427-1436

Vitali D. G., Sinzel M., Bulthuis E. P., Kolb A., Zabel S., Mehlhorn D. G., Costa B. F., Farkas A., Clancy A., Schuldiner M., Grefen C., Schwappach B., Borgese N. & Rapaport D. (2018). The GET pathway can increase the risk of mitochondrial outer membrane proteins to be mistargeted to the ER. Journal of Cell Science, Vol: 131

Bernheim A. & Sorek R. (2018). Viruses cooperate to defeat bacteria. Nature, Vol: 559, Page: 482-484

Gorelick-Ashkenazi A., Weiss R., Sapozhnikov L., Florentin A., Tarayrah-Ibraheim L., Dweik D., Yacobi-Sharon K. & Arama E. (2018). Caspases maintain tissue integrity by an apoptosis-independent inhibition of cell migration and invasion. Nature Communications, Vol: 9

Wang S., Stoops E., Unnikannan C. P., Markus B., Reuveny A., Ordan E. & Volk T. (2018). Mechanotransduction via the LINC complex regulates DNA replication in myonuclei. Journal of Cell Biology, Vol: 217, Page: 2005-2018

Ansari K. M., Arany P. R., Arama E., Larisch S., Birge R. B. & Chandra D. (2018). International conference on Cell Death in Cancer and Toxicology 2018 (CDCT-2018). Cell Communication and Signaling, Vol: 16

Chuartzman S. G. & Schuldiner M. (2018). Database for High Throughput Screening Hits (dHITS): a simple tool to retrieve gene specific phenotypes from systematic screens done in yeast. Yeast, Vol: 35, Page: 477-483

Tsvetkov P., Adler J., Myers N., Biran A., Reuven N. & Shaul Y. (2018). Oncogenic addiction to high 26S proteasome level. Cell Death and Disease, Vol: 9

Voichek Y., Mittelman K., Gordon Y., Bar-Ziv R., Smit D. L., Shenhav R. & Barkai N. (2018). Epigenetic Control of Expression Homeostasis during Replication Is Stabilized by the Replication Checkpoint. Molecular Cell, Vol: 70, Page: 1121-+

Izrael M., Slutsky S. G., Admoni T., Cohen L., Granit A., Hasson A., Itskovitz-Eldor J., Paker L. K., Kuperstein G., Lavon N., Ionescu S. Y., Solmesky L. J., Zaguri R., Zhuravlev A., Volman E., Chebath J. & Revel M. (2018). Safety and efficacy of human embryonic stem cell-derived astrocytes following intrathecal transplantation in SOD1(G93A) and NSG animal models. Stem Cell Research and Therapy, Vol: 9

Lipsitz Y. Y., Woodford C., Yin T., Hanna J. H. & Zandstra P. W. (2018). Modulating cell state to enhance suspension expansion of human pluripotent stem cells. Proceedings Of The National Academy Of Sciences Of The United States Of America-Biological Sciences, Vol: 115, Page: 6369-6374

Finkel Y., Stern-Ginossar N. & Schwartz M. (2018). Viral Short ORFs and Their Possible Functions. Proteomics, Vol: 18

Kama R., Gabriely G., Kanneganti V. & Gerst J. E. (2018). Cdc48 and ubiquilins confer selective anterograde protein sorting and entry into the multivesicular body in yeast. Molecular Biology of the Cell, Vol: 29, Page: 948-963

Kopecka J., Salaroglio I. C., Righi L., Libener R., Orecchia S., Grosso F., Milosevic V., Ananthanarayanan P., Ricci L., Capelletto E., Pradotto M., Napoli F., Di Maio M., Novello S., Rubinstein M., Scagliotti G. V. & Riganti C. (2018). Loss of C/EBP-beta LIP drives cisplatin resistance in malignant pleural mesothelioma. Lung Cancer, Vol: 120, Page: 34-45

Gorelik A., Sapir T., Ben-Reuven L. & Reiner O. (2018). Complement C3 Affects Rac1 Activity in the Developing Brain. Frontiers in Molecular Neuroscience, Vol: 11

Dar D. & Sorek R. (2018). Extensive reshaping of bacterial operons by programmed mRNA decay. PLoS Genetics, Vol: 14

Segal D., Zaritsky A., Schejter E. D. & Shilo B. (2018). Feedback inhibition of actin on Rho mediates content release from large secretory vesicles. Journal of Cell Biology, Vol: 217, Page: 1815-1826

Buiga P., Elson A., Tabernero L. & Schwartz J. (2018). Regulation of dual specificity phosphatases in breast cancer during initial treatment with Herceptin: a Boolean model analysis. BMC Systems Biology, Vol: 12, Page: 13-24

Shiloh R., Gilad Y., Ber Y., Eisenstein M., Aweida D., Bialik S., Cohen S. & Kimchi A. (2018). Non-canonical activation of DAPK2 by AMPK constitutes a new pathway linking metabolic stress to autophagy. Nature Communications, Vol: 9

Jantsch M., Quattrone A., O'Connell M., Helm M., Frye M., Macias-Gonzales M., Ohman M., Ameres S., Willems L., Fuks F., Oulas A., Vanacova S., Nielsen H., Bousquet-Antonelli C., Motorin Y., Roignant J., Balatsos N., Dinnyes A., Baranov P., Kelly V., Lamm A., Rechavi G., Pelizzola M., Liepins J., Holodnuka Kholodnyuk I., Zammit V., Ayers D., Drablos F., Dahl J. A., Bujnicki J., Jeronimo C., Almeida R., Neagu M., Costache M., Bankovic J., Banovic B., Kyselovic J., Valor L. M., Selbert S., Pir P., Demircan T., Cowling V., Schäfer M., Rossmanith W., Lafontaine D., David A., Carre C., Lyko F., Schaffrath R. & Schwartz S. (2018). Positioning Europe for the EPITRANSCRIPTOMICS challenge. RNA Biology, Vol: 15, Page: 829-831

Armstrong D. L., Lancet D. & Zidovetzki R. (2018). Replication of Simulated Prebiotic Amphiphilic Vesicles in a Finite Environment Exhibits Complex Behavior That Includes High Progeny Variability and Competition. Astrobiology, Vol: 18, Page: 419-430

Rubinstein M. & Dvash E. (2018). Leukotrienes and kidney diseases. Current Opinion in Nephrology and Hypertension, Vol: 27, Page: 42-48

Toledano T., Vitenshtein A., Stern-Ginossar N., Seidel E. & Mandelboim O. (2018). Decay of the Stress-Induced Ligand MICA Is Controlled by the Expression of an Alternative 3 ' Untranslated Region. Journal of Immunology, Vol: 200, Page: 2819-2825

Altshuler A., Verbuk M., Bhattacharya S., Abramovich I., Haklai R., Hanna J. H., Kloog Y., Gottlieb E. & Shalom-Feuerstein R. (2018). RAS Regulates the Transition from Naive to Primed Pluripotent Stem Cells. Stem Cell Reports, Vol: 10, Page: 1088-1101

Castro I. G., Schuldiner M. & Zalckvar E. (2018). Mind the Organelle Gap - Peroxisome Contact Sites in Disease. Trends in Biochemical Sciences, Vol: 43, Page: 199-210

Hornstein E. (2018). When TRBP leaves Dicer at the alt-'ER. EMBO Reports, Vol: 19

Elson A. (2018). Stepping out of the shadows: Oncogenic and tumor-promoting protein tyrosine phosphatases. International Journal of Biochemistry and Cell Biology, Vol: 96, Page: 135-147

Kimmerling N., Zuqert O., Amitai G., Gurevich T., Armoza-Zvuloni R., Kolesnikov I., Berenshtein I., Melamed S., Gilad S., Benjamin S., Rivlin A., Ohavia M., Paris C. B., Holzman R., Kiflawi M. & Sorek R. (2018). Quantitative species-level ecology of reef fish larvae via metabarcoding. Nature ecology & evolution, Vol: 2, Page: 306-316

Yardeni T., Fine R., Joshi Y., Gradus-Pery T., Kozer N., Reichenstein I., Yanowski E., Nevo S., Weiss-Tishler H., Eisenberg-Bord M., Shalit T., Plotnikov A., Barr H. M., Perlson E. & Hornstein E. (2018). High content image analysis reveals function of miR-124 upstream of Vimentin in regulating motor neuron mitochondria. Scientific Reports, Vol: 8

Rubinstein M. (2018). Is Lgr4 essential for VSV- and VSV-G-pseudotyped lentiviral vector entry to cells?. The journal of Biological chemistry, Vol: 293, Page: 112-112

Reiner O. & Sapir T. (2018). A Coated Sponge: Toward Neonatal Brain Repair. Cell Stem Cell, Vol: 22, Page: 3-4

Segev N. & Gerst J. E. (2018). Specialized ribosomes and specific ribosomal protein paralogs control translation of mitochondrial proteins. Journal of Cell Biology, Vol: 217, Page: 117-126

Slomka S. & Pilpel Y. (2018). Meiotic Recombination: Genetics' Good Old Scalpel. Cell, Vol: 172, Page: 391-392

Schirman D., Frumkin I. & Pilpel Y. (2018). Does cancer strive to minimize the cost of gene expression?. Oncotarget, Vol: 9, Page: 27909-27910

Shah P. S., Link N., Jang G. M., Sharp P. P., Zhu T., Swaney D. L., Johnson J. R., Von Dollen J., Ramage H. R., Satkamp L., Newton B., Hüttenhain R., Petit M. J., Baum T., Everitt A., Laufman O., Tassetto M., Shales M., Stevenson E., Iglesias G. N., Shokat L., Tripathi S., Balasubramaniam V., Webb L. G., Aguirre S., Willsey A. J., Garcia-Sastre A., Pollard K. S., Cherry S., Gamarnik A. V., Marazzi I., Taunton J., Fernandez-Sesma A., Bellen H. J., Andino R. & Krogan N. J. (2018). Comparative Flavivirus-Host Protein Interaction Mapping Reveals Mechanisms of Dengue and Zika Virus Pathogenesis. Cell (Cambridge), Vol: 175, Page: 1931-1945.e18

Gabay-Maskit S., Schuldiner M. & Zalckvar E. (2018). Validation of a yeast malate dehydrogenase 2 (Mdh2) antibody tested for use in western blots. F1000Research, Vol: 7, Page: 130

Karlinski M. & Reiner O. (2018). Unfolding the folds: How the biomechanics of the extracellular matrix contributes to cortical gyrification. Opera Medica et Physiologica, Vol: 4, Page: 63-70

Karzbrun E., Kshirsagar A. & Reiner O. (2018). Human brain organoids on a chip to study development and disease. Opera Medica et Physiologica, Vol: 4, Page: 12

Yifrach E., Fischer S., Oeljeklaus S., Schuldiner M., Zalckvar E. & Warscheid B. (2018). Defining the mammalian peroxisomal proteome. , Page: 47-66

Weinberg R. A., Schuldiner M., Wu H., Stevens B., Nielsen J., Robin Hiesinger P. & Hassan B. A. (2018). All you need is mentorship. , Page: 256-258

Nicolas A., Kenna K. P., Renton A. E., Ticozzi N., Faghri F., Chia R., Dominov J. A., Kenna B. J., Nalls M. A., Keagle P., Rivera A. M., van Rheenen W., Murphy N. A., van Vugt J. J., Geiger J. T., Van der Spek R. A., Pliner H. A., Shankaracharya, Smith B. N. & Hornstein E. (2018). Genome-wide Analyses Identify KIF5A as a Novel ALS Gene. Neuron, Vol: 97, Page: 1268-1283.e6

Conlon E. G., Fagegaltier D., Agius P., Davis-Porada J., Gregory J., Hubbard I., Kang K., Kim D., Phatnani H., Shneider N. A., Manley J. L., Kwan J., Sareen D., Broach J. R., Simmons Z., Arcila-Londono X., Lee E. B., Van Deerlin V. M., Fraenkel E. & Hornstein E. (2018). Unexpected similarities between C9ORF72 and sporadic forms of ALS/FTD suggest a common disease mechanism. eLife, Vol: 7

Doron S., Melamed S., Ofir G., Leavitt A., Lopatina A., Keren M., Amitai G. & Sorek R. (2018). Systematic discovery of antiphage defense systems in the microbial pangenome. Science (American Association for the Advancement of Science), Vol: 359

Rak R., Dahan O. & Pilpel Y. (2018). Repertoires of tRNAs: The Couplers of Genomics and Proteomics. Annual Review of Cell and Developmental Biology, Vol: 34, Page: 239-264

Salinas N., Povolotsky T. L., Landau M. & Kolodkin-Gal I. (2021). Emerging Roles of Functional Bacterial Amyloids in Gene Regulation, Toxicity, and Immunomodulation. Microbiology and molecular biology reviews : MMBR, Vol: 85

Dhanyasi N., VijayRaghavan K., Shilo B. & Schejter E. D. (2021). Microtubules provide guidance cues for myofibril and sarcomere assembly and growth. Developmental Dynamics, Vol: 250, Page: 60-73

Bernheim A., Millman Dayan A. J., Ofir G., Meitav G., Avraham C., Shomar H., Rosenberg M. M., Tal N., Melamed S., Amitai G. & Sorek R. (2021). Prokaryotic viperins produce diverse antiviral molecules. Nature, Vol: 589, Page: 120-124

Reiner O., Parichha A. & Sapir T. (2021). Modeling human neuronal migration deficits in 3D. Current Opinion in Neurobiology, Vol: 66, Page: 30-36

Felsenthal N. & Zelzer E. (2021). Immunofluorescent Staining of Adult Murine Paraffin-Embedded Skeletal Tissue. , Page: 337-344

Sas-Chen A., Nir R. & Schwartz S. (2021). mito-Ψ-Seq: A High-Throughput Method for Systematic Mapping of Pseudouridine Within Mitochondrial RNA. , Page: 103-115

Mitsunaga S., Shioda K., Hanna J. H., Isselbacher K. J. & Shioda T. (2021). Production and analysis of human primordial germ celllike cells. , Page: 125-145

Jana T., Brodsky S. & Barkai N. (2021). SpeedSpecificity Trade-Offs in the Transcription Factors Search for Their Genomic Binding Sites. Trends in Genetics, Vol: 37, Page: 421-432

Hou Q., Keren-Paz A., Korenblum E., Oved R., Malitsky S. & Kolodkin-Gal I. (2021). Weaponizing volatiles to inhibit competitor biofilms from a distance. npj Biofilms and Microbiomes, Vol: 7

Lobinska G., Pilpel Y. & Ram Y. (2021). Epigenetically Inherited Mutation Rates Give Rise to Highest Rates of Evolutionary Adaptation. WIS Repository

Bornstein B., Konstantin N., Alessandro C., Tresch M. C. & Zelzer E. (2021). More than movement: the proprioceptive system as a new regulator of musculoskeletal biology. Current Opinion in Physiology, Vol: 20, Page: 77-89

Kult S., Olender T., Osterwalder M., Markman S., Leshkowitz D., Krief S., Blecher-Gonen R., Ben-Moshe S., Farack L., Keren-Shaul H., Salame T. M., Capellini T. D., Itzkovitz S., Amit I., Visel A. & Zelzer E. (2021). Bi-fated tendon-to-bone attachment cells are regulated by shared enhancers and KLF transcription factors. eLife, Vol: 10, Page: 1-29

Shin B., Hosokawa H., Romero-Wolf M., Zhou W., Masuhara K., Tobin V. R., Levanon D., Groner Y. & Rothenberg E. V. (2021). Runx1 and Runx3 drive progenitor to T-lineage transcriptome conversion in mouse T cell commitment via dynamic genomic site switching. Proceedings of the National Academy of Sciences of the United States of America, Vol: 118

Shalev M., Arman E., Stein M., Cohen-Sharir Y., Brumfeld V., Kapishnikov S., Royal I., Tuckermann J. & Elson A. (2021). PTPRJ promotes osteoclast maturation and activity by inhibiting Cbl-mediated ubiquitination of NFATc1 in late osteoclastogenesis. FEBS Journal, Vol: 288, Page: 4702-4723

Barnea Zohar M., Winograd-Katz S., Shalev M., Arman E., Reuven N., Roth L., Golani O., Stein M., Thalji F., Kanaan M., Tuckermann J., Geiger B. & Elson A. (2021). An SNX10-dependent mechanism downregulates fusion between mature osteoclasts. Journal of Cell Science, Vol: 134

Aguilera-Castrejon A., Shani T., Ghanem N., Itzkovich C., Slomovich S., Tarazi S., Bayerl J., Chugaeva V., Ayyash M., Ashouokhi S., Sheban D., Livnat N., Lasman L., Viukov S., Zerbib M., Addadi Y., Rais Y., Cheng S., Keren-Shaul H., Stelzer Y., Shlomo R., Massarwa R., Novershtern N. & Hanna J. H. (2021). Ex utero mouse embryogenesis from pre-gastrulation to late organogenesis. Nature (London), Vol: 593, Page: 119-124

Annabi N., Baker M., Boettiger A., Chakraborty D., Chen Y., Corbett K. S., Correia B., Dahlman J., de Oliveira T., Ertuerk A., Yanik M. F., Henaff E., Huch M., Iliev I. D., Jacobs T., Junca H., Keung A., Kolodkin-Gal I., Krishnaswamy S., Lancaster M., Macosko E., Martínez-Núñez M. A., Miura K., Molloy J., Cruz A. O., Platt R. J., Posey, Jr A. D., Shao H., Simunovic M., Slavov N., Takebe T., Vandenberghe L. H., Varshney R. K. & Wang J. (2021). Voices of biotech research. Nature Biotechnology, Page: 281-286

Frenkel N., Jonas F., Carmi M., Yaakov G. & Barkai N. (2021). Rtt109 slows replication speed by histone N-terminal acetylation. Genome Research, Vol: 31, Page: 426-435

Thalalla Gamage S., Sas-Chen A., Schwartz S. & Meier J. L. (2021). Quantitative nucleotide resolution profiling of RNA cytidine acetylation by ac4C-seq. Nature protocols, Vol: 16, Page: 2286-2307

Reuven N., Adler J., Myers N. & Shaul Y. (2021). CRISPR Co-Editing Strategy for Scarless Homology-Directed Genome Editing. International Journal of Molecular Sciences, Vol: 22

Brodsky S., Jana T. & Barkai N. (2021). Order through disorder: The role of intrinsically disordered regions in transcription factor binding specificity. Current Opinion in Structural Biology, Vol: 71, Page: 110-115

Arama E. (2021). Editor Profile: Eli Arama. The FEBS journal, Vol: 288, Page: 6310-6314

Izrael M., Molakandov K., Revel A., Slutsky S. G., Sonnenfeld T., Weiss J. M. & Revel M. (2021). Astrocytes Downregulate Inflammation in Lipopolysaccharide-Induced Acute Respiratory Distress Syndrome: Applicability to COVID-19. Frontiers in Medicine, Vol: 8

Bernshtein B., Nachshon A., Shnayder M., Stern L., Avdic S., Blyth E., Gottlieb D., Abendroth A., Slobedman B., Stern-Ginossar N. & Schwartz M. (2021). Profiling the Blood Compartment of Hematopoietic Stem Cell Transplant Patients During Human Cytomegalovirus Reactivation. Frontiers in Cellular and Infection Microbiology, Vol: 10

Bartok O., Pataskar A., Nagel R., Laos M., Goldfarb E., Hayoun D., Levy R., Körner P., Kreuger I. Z. M., Champagne J., Zaal E. A., Bleijerveld O. B., Huang X., Kenski J., Wargo J., Brandis A., Levin Y., Mizrahi O., Alon M., Lebon S., Yang W., Nielsen M. M., Stern-Ginossar N., Altelaar M., Berkers C. R., Geiger T., Peeper D. S., Olweus J., Samuels Y. & Agami R. (2021). Anti-tumour immunity induces aberrant peptide presentation in melanoma. Nature, Vol: 590, Page: 332-337

Gabet Y., Neumann D., Levaot N., Elson A. & Sims N. A. (2021). Editorial: Developmental Biology and Regulation of Osteoclasts. Frontiers in Cell and Developmental Biology, Vol: 9

Grenov A. C., Moss L., Edelheit S., Cordiner R., Schmiedel D., Biram A., Hanna J. H., Jensen T. H., Schwartz S. & Shulman Z. (2021). The germinal center reaction depends on RNA methylation and divergent functions of specific methyl readers. Journal of Experimental Medicine, Vol: 218

Rousset F. & Sorek R. (2021). A treasure trove of molecular scissors: Ancestral RNA-guided nucleases greatly expand the toolbox for gene editing. Science, Vol: 374, Page: 37-38

Bayerl J., Ayyash M., Shani T., Manor Y. S., Gafni O., Massarwa R., Kalma Y., Aguilera-Castrejon A., Zerbib M., Amir H., Sheban D., Geula S., Mor N., Weinberger L., Naveh Tassa S., Krupalnik V., Oldak B., Livnat N., Tarazi S., Wildschutz E., Tawil S., Ashouokhi S., Lasman L., Rotter V., Hanna S., Ben-Yosef D., Novershtern N., Viukov S. & Hanna J. H. (2021). Principles of signaling pathway modulation for enhancing human naive pluripotency induction. Cell Stem Cell, Vol: 28, Page: 1549-1565.e12

Heinemann-Yerushalmi L., Bentovim L., Felsenthal N., Vinestock R. C., Michaeli N., Krief S., Silberman A., Cohen M., Ben-Dor S., Brenner O., Haffner-Krausz R., Itkin M., Malitsky S., Erez A. & Zelzer E. (2021). BCKDK regulates the TCA cycle through PDC in the absence of PDK family during embryonic development. Developmental Cell, Vol: 56, Page: 1182-1194.e6

Backes S., Bykov Y. S., Flohr T., Räschle M., Zhou J., Lenhard S., Krämer L., Mühlhaus T., Bibi C., Jann C., Smith J. D., Steinmetz L. M., Rapaport D., Storchová Z., Schuldiner M., Boos F. & Herrmann J. M. (2021). The chaperone-binding activity of the mitochondrial surface receptor Tom70 protects the cytosol against mitoprotein-induced stress. Cell Reports, Vol: 35

Beyer K., MacLennan S. J., Moris L., Lardas M., Mastris K., Hooker G., Greene R., Briers E., Omar M. I., Healey J., Tripathee S., Gandaglia G., Venderbos L. D., Smith E. J., Bjorkqvist J., Asiimwe A., Huber J., Roobol M. J., Zong J. & Lancet D. (2021). The Key Role of Patient Involvement in the Development of Core Outcome Sets in Prostate Cancer. European Urology Focus, Vol: 7, Page: 943-946

Dewan R., Chia R., Ding J., Hickman R. A., Stein T. D., Abramzon Y., Ahmed S., Sabir M. S., Portley M. K., Tucci A., Ibáñez K., Shankaracharya F. N., Keagle P., Rossi G., Caroppo P., Tagliavini F., Waldo M. L., Johansson P. M., Nilsson C. F. & Hornstein E. (2021). Pathogenic Huntingtin Repeat Expansions in Patients with Frontotemporal Dementia and Amyotrophic Lateral Sclerosis. Neuron, Vol: 109, Page: 448-460.e4

Phatnani H., Kwan J., Sareen D., Broach J. R., Simmons Z., Arcila-Londono X., Lee E. B., Van Deerlin V. M., Shneider N. A., Fraenkel E., Ostrow L. W., Baas F., Zaitlen N., Berry J. D., Malaspina A., Fratta P., Cox G. A., Thompson L. M., Finkbeiner S. & Hornstein E. (2021). An integrated multi-omic analysis of iPSC-derived motor neurons from C9ORF72 ALS patients. iScience, Vol: 24

Hurst V., Challa K., Jonas F., Forey R., Sack R., Seebacher J., Schmid C. D., Barkai N., Shimada K., Gasser S. M. & Poli J. (2021). A regulatory phosphorylation site on Mec1 controls chromatin occupancy of RNA polymerases during replication stress. EMBO Journal, Vol: 40

Yaakov G., Jonas F. & Barkai N. (2021). Measurement of histone replacement dynamics with genetically encoded exchange timers in yeast. Nature biotechnology, Vol: 39, Page: 1434-1443

Wiener D. & Schwartz S. (2021). How many tRNAs are out there?. Molecular Cell, Vol: 81, Page: 1595-1597

Stern-Ginossar N., Kanneganti T. D., Cameron C. E., Lou Z., Cherry S., Abraham J. & Martin-Sancho L. (2021). Rising to the challenge of COVID-19: Working on SARS-CoV-2 during the pandemic. Molecular Cell, Vol: 81, Page: 2261-2265

Li J., Xu B., He M., Zong X., Cunningham T., Sha C., Fan Y., Cross R., Hanna J. H. & Feng Y. (2021). Control of Foxp3 induction and maintenance by sequential histone acetylation and DNA demethylation. Cell reports (Cambridge), Vol: 37

Gokhman D., Agoglia R. M., Kinnebrew M., Gordon W., Sun D., Bajpai V. K., Naqvi S., Chen C., Chan A., Chen C., Petrov D. A., Ahituv N., Zhang H., Mishina Y., Wysocka J., Rohatgi R. & Fraser H. B. (2021). Humanchimpanzee fused cells reveal cis-regulatory divergence underlying skeletal evolution. Nature Genetics, Vol: 53, Page: 467-476

Georgeson J. & Schwartz S. (2021). The ribosome epitranscriptome: inert-or a platform for functional plasticity?. RNA (Cambridge), Vol: 27, Page: 1293-1301

Dierks D., Garcia-Campos M. A., Uzonyi A., Safra M., Edelheit S., Rossi A., Sideri T., Varier R. A., Brandis A., Stelzer Y., van Werven F., Scherz-Shouval R. & Schwartz S. (2021). Multiplexed profiling facilitates robust m6A quantification at site, gene and sample resolution. Nature Methods, Vol: 18, Page: 1060-1067

Broennimann K., Ricardo-Lax I., Adler J., Michailidis E., de Jong Y. P., Reuven N. & Shaul Y. (2021). RNR-R2 Upregulation by a Short Non-Coding Viral Transcript. Biomolecules (Basel, Switzerland), Vol: 11

Wiener D., Antebi Y. & Schwartz S. (2021). Decoupling of degradation from deadenylation reshapes poly(A) tail length in yeast meiosis. Nature Structural & Molecular Biology, Vol: 28, Page: 1038-1049

Magen I., Yacovzada N. S., Yanowski E., Coenen-Stass A., Grosskreutz J., Lu C., Greensmith L., Malaspina A., Fratta P. & Hornstein E. (2021). Circulating miR-181 is a prognostic biomarker for amyotrophic lateral sclerosis. Nature Neuroscience, Vol: 24, Page: 1534-1541

Yacovzada N. S. & Hornstein E. (2021). microRNAs trip down memory lane. EMBO Molecular Medicine, Vol: 13

Duncan-Lowey B., McNamara-Bordewick N. K., Tal N., Sorek R. & Kranzusch P. J. (2021). Effector-mediated membrane disruption controls cell death in CBASS antiphage defense. Molecular Cell, Vol: 81, Page: 5039-5051.e5

Carmon S., Jonas F. R. H., Barkai N., Schejter E. & Shilo B. (2021). Generation and timing of graded responses to morphogen gradients. Development, Vol: 148

Ofir G., Herbst E., Baroz M., Cohen D., Millman A., Doron S., Tal N., Malheiro D. B. A., Malitsky S., Amitai G. & Sorek R. (2021). Antiviral activity of bacterial TIR domains via immune signalling molecules. Nature (London), Vol: 600, Page: 116-120

David Y., Castro I. G. & Schuldiner M. (2021). The Fast and the Furious: Golgi Contact Sites. Contact, Vol: 4

Tal N., Morehouse B. R., Millman A., Stokar-Avihail A., Avraham C., Fedorenko T., Yirmiya E., Herbst E., Brandis A., Mehlman T., Oppenheimer-Shaanan Y., Keszei A. F., Shao S., Amitai G., Kranzusch P. J. & Sorek R. (2021). Cyclic CMP and cyclic UMP mediate bacterial immunity against phages. Cell, Vol: 184, Page: 5728-5739.e16

Aguilera-Castrejon A. & Hanna J. H. (2021). Ex Utero Culture of Mouse Embryos from Pregastrulation to Advanced Organogenesis. Nature, Vol: 593, Page: 119-124

Rak R., Polonsky M., Eizenberg-Magar I., Mo Y., Sakaguchi Y., Mizrahi O., Nachshon A., Reich-Zeliger S., Stern-Ginossar N., Dahan O., Suzuki T., Friedman N. & Pilpel Y. (2021). Dynamic changes in tRNA modifications and abundance during T cell activation. Proceedings of the National Academy of Sciences - PNAS, Vol: 118

Kahana A., Maslov S. & Lancet D. (2021). Dynamic lipid aptamers: non-polymeric chemical path to early life. Chemical Society Reviews, Vol: 50, Page: 11741-11746

Kahana A. & Lancet D. (2021). Self-reproducing catalytic micelles as nanoscopic protocell precursors. Nature reviews. Chemistry, Vol: 5, Page: 870-878

Jacob Berger A., Gigi E., Kupershmidt L., Meir Z., Gavert N., Zwang Y., Prior A., Gilad S., Harush U., Haviv I., Stemmer S. M., Blum G., Merquiol E., Mardamshina M., Kaminski Strauss S., Friedlander G., Bar J., Kamer I., Reizel Y., Geiger T., Pilpel Y., Levin Y., Tanay A., Barzel B., Reuveni H. & Straussman R. (2021). IRS1 phosphorylation underlies the non-stochastic probability of cancer cells to persist during EGFR inhibition therapy. Nature Cancer, Vol: 2, Page: 1055-1070

Eisenberg-Bord M., Zung N., Collado J., Drwesh L., Fenech E. J., Fadel A., Dezorella N., Bykov Y. S., Rapaport D., Fernandez-Busnadiego R. & Schuldiner M. (2021). Cnm1 mediates nucleusmitochondria contact site formation in response to phospholipid levels. The Journal of Cell Biology, Vol: 220

Reiner O., Sapir T. & Parichha A. (2021). Use of iPSC-derived brain organoids to study human brain evolution. , Vol: 5, Page: 157-177

Goettsch W., Beerenwinkel N., Deng L., Dölken L., Dutilh B. E., Erhard F., Kaderali L., von Kleist M., Marquet R., Matthijnssens J., McCallin S., McMahon D., Rattei T., Van Rij R. P., Robertson D. L., Schwemmle M., Stern-Ginossar N. & Marz M. (2021). ITN-VIROINF: Understanding (Harmful) Virus-Host Interactions by Linking Virology and Bioinformatics. Viruses, Vol: 13

Koch C., Schuldiner M. & Herrmann J. M. (2021). Er-surf: Riding the endoplasmic reticulum surface to mitochondria. International Journal of Molecular Sciences, Vol: 22

Schirman D., Yakhini Z., Pilpel Y. & Dahan O. (2021). A broad analysis of splicing regulation in yeast using a large library of synthetic introns. PLoS Genetics, Vol: 17

Tsvetkov P., Adler J., Strobelt R., Adamovich Y., Asher G., Reuven N. & Shaul Y. (2021). NQO1 Binds and Supports SIRT1 Function. Frontiers in Pharmacology, Vol: 12

Klionsky D. J., Kimchi A., Zehavi H. & Wu J. (2021). Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)¹. Autophagy, Vol: 17, Page: 1-382

Repudi S., Steinberg D. J., Elazar N., Breton V. L., Aquilino M. S., Saleem A., Abu-Swai S., Vainshtein A., Eshed-Eisenbach Y., Vijayaragavan B., Behar O., Hanna J. J., Peles E., Carlen P. L. & Aqeilan R. I. (2021). Neuronal deletion of Wwox, associated with WOREE syndrome, causes epilepsy and myelin defects. Brain, Vol: 144, Page: 3061-3077

Rubin S., Agrawal A., Stegmaier J., Krief S., Felsenthal N., Svorai J., Addadi Y., Villoutreix P., Stern T. & Zelzer E. (2021). Application of 3D MAPs pipeline identifies the morphological sequence chondrocytes undergo and the regulatory role of GDF5 in this process. Nature Communications, Vol: 12, Page: 1-16

Lemus L., Matić Z., Gal L., Fadel A., Schuldiner M. & Goder V. (2021). Post-ER degradation of misfolded GPI-anchored proteins is linked with microautophagy. Current Biology, Vol: 31, Page: 4025-4037.e5

Elson A., Stein M., Rabie G., Barnea-Zohar M., Winograd-Katz S., Reuven N., Shalev M., Sekeres J., Kanaan M., Tuckermann J. & Geiger B. (2021). Sorting Nexin 10 as a Key Regulator of Membrane Trafficking in Bone-Resorbing Osteoclasts: Lessons Learned From Osteopetrosis. Frontiers in Cell and Developmental Biology, Vol: 9

Amiad-Pavlov D., Lorber D., Bajpai G., Reuveny A., Roncato F., Alon R., Safran S. & Volk T. (2021). Live imaging of chromatin distribution reveals novel principles of nuclear architecture and chromatin compartmentalization. Science Advances, Vol: 7

Brennan F. H., Coulthard L. G., Alawieh A. M., Reiner O. & Pekna M. (2021). Editorial: Complement in the Development and Regeneration of the Nervous System. Frontiers in Immunology, Vol: 12

Keiten-Schmitz J., Röder L., Hornstein E., Müller-McNicoll M. & Müller S. (2021). SUMO: Glue or Solvent for Phase-Separated Ribonucleoprotein Complexes and Molecular Condensates?. Frontiers in Molecular Biosciences, Vol: 8

Bajpai G., Amiad Pavlov D., Lorber D., Volk T. & Safran S. (2021). Mesoscale phase separation of chromatin in the nucleus. eLife, Vol: 10

Nair R. R., Zabezhinsky D., Gelin-Licht R., Haas B. J., Dyhr M. C., Sperber H. S., Nusbaum C. & Gerst J. E. (2021). Multiplexed mrna assembly into ribonucleoprotein particles plays an operon-like role in the control of yeast cell physiology. eLife, Vol: 10

Begik O., Lucas M. C., Pryszcz L. P., Ramirez J. M., Medina R., Milenkovic I., Cruciani S., Liu H., Vieira H. G. S., Sas-Chen A., Mattick J. S., Schwartz S. & Novoa E. M. (2021). Quantitative profiling of pseudouridylation dynamics in native RNAs with nanopore sequencing. Nature biotechnology, Vol: 39, Page: 1278-1291

Finkel Y., Gluck A., Nachshon A., Winkler R., Fisher T., Rozman B., Mizrahi O., Lubelsky Y., Zuckerman B., Slobodin B., Yahalom-Ronen Y., Tamir H., Ulitsky I., Israely T., Paran N., Schwartz M. & Stern-Ginossar N. (2021). SARS-CoV-2 uses a multipronged strategy to impede host protein synthesis. Nature, Vol: 594, Page: 240-245

Kamalesh K., Scher N., Biton T., Schejter E. D., Shilo B. & Avinoam O. (2021). Exocytosis by vesicle crumpling maintains apical membrane homeostasis during exocrine secretion. Developmental Cell, Vol: 56, Page: 1603-1616.e6

Barshir R., Fishilevich S., Iny-Stein T., Zelig O., Mazor Y., Guan-Golan Y., Safran M. & Lancet D. (2021). GeneCaRNA: A Comprehensive Gene-centric Database of Human Non-coding RNAs in the GeneCards Suite. Journal of Molecular Biology, Vol: 433

Lupo O., Krieger G., Jonas F. & Barkai N. (2021). Accumulation of cis- And trans-regulatory variations is associated with phenotypic divergence of a complex trait between yeast species. G3: Genes, Genomes, Genetics, Vol: 11

Uzonyi A., Nir R., Shliefer O., Stern-Ginossar N., Antebi Y., Stelzer Y., Levanon E. Y. & Schwartz S. (2021). Deciphering the principles of the RNA editing code via large-scale systematic probing. Molecular Cell, Vol: 81, Page: 2374-2387.e3

Nedeva I. R., Vitale M., Elson A., Hoyland J. A. & Bella J. (2021). Role of OSCAR Signaling in Osteoclastogenesis and Bone Disease. Frontiers in Cell and Developmental Biology, Vol: 9

Laborenz J., Bykov Y. S., Knöringer K., Räschle M., Filker S., Prescianotto-Baschong C., Spang A., Tatsuta T., Langer T., Storchová Z., Schuldiner M. & Herrmann J. M. (2021). The ER protein Ema19 facilitates the degradation of nonimported mitochondrial precursor proteins. Molecular Biology of the Cell, Vol: 32, Page: 664-674

Haimovich G., Dasgupta S. & Gerst J. E. (2021). RNA transfer through tunneling nanotubes. Biochemical Society Transactions, Vol: 49, Page: 145-160

Molakandov K., Berti D. A., Beck A., Elhanani O., Walker M. D., Soen Y., Yavriyants K., Zimerman M., Volman E., Toledo I., Erukhimovich A., Levy A. M., Hasson A., Itskovitz-Eldor J., Chebath J. & Revel M. (2021). Selection for CD26− and CD49A+ Cells From Pluripotent Stem Cells-Derived Islet-Like Clusters Improves Therapeutic Activity in Diabetic Mice. Frontiers in endocrinology (Lausanne), Vol: 12

Jungreis I., Nelson C. W., Ardern Z., Finkel Y., Krogan N. J., Sato K., Ziebuhr J., Stern-Ginossar N., Pavesi A., Firth A. E., Gorbalenya A. E. & Kellis M. (2021). Conflicting and ambiguous names of overlapping ORFs in the SARS-CoV-2 genome: A homology-based resolution. Virology (New York, N.Y.), Vol: 558, Page: 145-151

Tarayrah-Ibraheim L., Maurice E. C., Hadary G., Ben-Hur S., Kolpakova A., Braun T., Peleg Y., Yacobi-Sharon K. & Arama E. (2021). DNase II mediates a parthanatos-like developmental cell death pathway in Drosophila primordial germ cells. Nature Communications, Vol: 12

Deretic V., Prossnitz E., Burge M., Campen M. J., Cannon J., Liu K. J., Liu M., Hall P., Sklar L. A., Allers L., Mariscal L., Garcia S. A., Weaver J., Baehrecke E. H., Behrends C., Cecconi F., Codogno P., Chen G., Elazar Z., Eskelinen E., Fourie B., Gozuacik D., Hong W., Jo E., Johansen T., Juhasz G., Kimch A., Ktistakis N., Kroemer G., Mizushima N., Muenz C., Reggiori F., Rubinsztein D., Ryan K., Schroder K., Shen H., Simonsen A., Tooze S. A., Vaccaro M., Yoshimori T., Yu L., Zhang H. & Klionsky D. J. (2019). Autophagy, Inflammation, and Metabolism (AIM) Center in its second year. Autophagy, Vol: 15, Page: 1829-1833

Gordon L., Blechman J., Shimoni E., Gur D., Anand-Apte B. & Levkowitz G. (2019). The fenestrae-associated protein Plvap regulates the rate of blood-borne protein passage into the hypophysis. Development, Vol: 146

Castro I. G., Eisenberg-Bord M., Persiani E., Rochford J. J., Schuldiner M. & Bohnert M. (2019). Promethin Is a Conserved Seipin Partner Protein. Cells, Vol: 8

Scorrano L., De Matteis M. A., Emr S., Giordano F., Hajnoczky G., Kornmann B., Lackner L. L., Levine T. P., Pellegrini L., Reinisch K., Rizzuto R., Simmen T., Stenmark H., Ungermann C. & Schuldiner M. (2019). Coming together to define membrane contact sites. Nature Communications, Vol: 10

Sapir T., Segal M., Grigoryan G., Hansson K. M., James P., Segal M. & Reiner O. (2019). The Interactome of Palmitoyl-Protein Thioesterase 1 (PPT1) Affects Neuronal Morphology and Function. Frontiers in Cellular Neuroscience, Vol: 13

Stern-Ginossar N., Thompson S. R., Mathews M. B. & Mohr I. (2019). Translational Control in Virus-Infected Cells. Cold Spring Harbor perspectives in biology, Vol: 11

Ofer L., Dean M. N., Zaslansky P., Kult S., Shwartz Y., Zaretsky J., Griess-Fishheimer S., Monsonego-Ornan E., Zelzer E. & Shahar R. (2019). A novel nonosteocytic regulatory mechanism of bone modeling. PLoS Biology, Vol: 17

Dorn L. E., Lasman L., Chen J., Xu X., Hund T. J., Medvedovic M., Hanna J. H., van Berlo J. H. & Accornero F. (2019). The N-6-Methyladenosine mRNA Methylase METTL3 Controls Cardiac Homeostasis and Hypertrophy. Circulation, Vol: 139, Page: 533-545

Mitsunaga S., Shioda K., Isselbacher K. J., Hanna J. H. & Shioda T. (2019). Generation of Human Primordial Germ Cell-like Cells at the Surface of Embryoid Bodies from Primed-pluripotency Induced Pluripotent Stem Cells. Jove-Journal Of Visualized Experiments

Zviran A., Mor N., Rais Y., Gingold H., Peles S., Chomsky E., Viukov S., Buenrostro J. D., Scognamiglio R., Weinberger L., Manor Y. S., Krupalnik V., Zerbib M., Hezroni H., Jaitin D. A., Larastiaso D., Gilad S., Benjamin S., Gafni O., Mousa A., Ayyash M., Sheban D., Bayerl J., Aguilera-Castrejon A., Massarwa R., Maza I., Hanna S., Stelzer Y., Ulitsky I., Greenleaf W. J., Tanay A., Trumpp A., Amit I., Pilpel Y., Novershtern N. & Hanna J. H. (2019). Deterministic Somatic Cell Reprogramming Involves Continuous Transcriptional Changes Governed by Myc and Epigenetic-Driven Modules. Cell Stem Cell, Vol: 24, Page: 328-341.e9

Weill U., Krieger G., Avihou Z., Milo R., Schuldiner M. & Davidi D. (2019). Assessment of GFP Tag Position on Protein Localization and Growth Fitness in Yeast. Journal of Molecular Biology, Vol: 431, Page: 636-641

Winkler R., Gillis E., Lasman L., Safra M., Geula S., Soyris C., Nachshon A., Tai-Schmiedel J., Friedman N., Le-Trilling V. T. K., Trilling M., Mandelboim M., Hanna J. H., Schwartz S. & Stern-Ginossar N. (2019). m⁶A modification controls the innate immune response to infection by targeting type I interferons. Nature Immunology, Vol: 20, Page: 173-182

Dubreuil B., Sass E., Nadav Y., Heidenreich M., Georgeson J. M., Weill U., Duan Y., Meurer M., Schuldiner M., Knop M. & Levy E. D. (2019). YeastRGB: comparing the abundance and localization of yeast proteins across cells and libraries. Nucleic Acids Research, Vol: 47, Page: D1245-D1249

Hamilton W. B., Mosesson Y., Monteiro R. S., Emdal K. B., Knudsen T. E., Francavilla C., Barkai N., Olsen J. V. & Brickman J. M. (2019). Dynamic lineage priming is driven via direct enhancer regulation by ERK. Nature, Vol: 575, Page: 355-360

Thomason M. K., Voichek M., Dar D., Addis V., Fitzgerald D., Gottesman S., Sorek R. & Greenberga E. P. (2019). A rhlI 5' UTR-Derived sRNA Regulates RhlR-Dependent Quorum Sensing in Pseudomonas aeruginosa. mBio, Vol: 10

Cohen D., Melamed S., Millman A., Shulman G., Oppenheimer-Shaanan Y., Kacen A., Doron S., Amitai G. & Sorek R. (2019). Cyclic GMP-AMP signalling protects bacteria against viral infection. Nature, Vol: 574, Page: 691-695

Nachmani D., Bothmer A. H., Grisendi S., Mele A., Bothmer D., Lee J. D., Monteleone E., Cheng K., Zhang Y., Bester A. C., Guzzetti A., Mitchell C. A., Mendez L. M., Pozdnyakova O., Sportoletti P., Martelli M., Vulliamy T. J., Safra M., Schwartz S., Luzzatto L., Bluteau O., Soulier J., Darnell R. B., Falini B., Dokal I., Ito K., Clohessy J. G. & Pandolfi P. P. (2019). Germline NPM1 mutations lead to altered rRNA 2 '-O-methylation and cause dyskeratosis congenita. Nature Genetics, Vol: 51, Page: 1518-1529

Haribowo A. G., Hannich J. T., Michel A. H., Megyeri M., Schuldiner M., Kornmann B. & Riezman H. (2019). Cytotoxicity of 1-deoxysphingolipid unraveled by genome-wide genetic screens and lipidomics in Saccharomyces cerevisiae. Molecular Biology of the Cell, Vol: 30, Page: 2814-2826

Barbosa A. D., Lim K., Mari M., Edgar J. R., Gal L., Sterk P., Jenkins B. J., Koulman A., Savage D. B., Schuldiner M., Reggiori F., Wigge P. A. & Siniossoglou S. (2019). Compartmentalized Synthesis of Triacylglycerol at the Inner Nuclear Membrane Regulates Nuclear Organization. Developmental Cell, Vol: 50, Page: 755-766

Mordret E., Dahan O., Asraf O., Rak R., Yehonadav A., Barnabas G. D., Cox J., Geiger T., Lindner A. B. & Pilpel Y. (2019). Systematic Detection of Amino Acid Substitutions in Proteomes Reveals Mechanistic Basis of Ribosome Errors and Selection for Translation Fidelity. Molecular Cell, Vol: 75, Page: 427-441.e5

Kahana A., Schmitt-Kopplin P. & Lancet D. (2019). Enceladus: First Observed Primordial Soup Could Arbitrate Origin-of-Life Debate. Astrobiology, Page: 1263-1278

Kahana A. & Lancet D. (2019). Protobiotic Systems Chemistry Analyzed by Molecular Dynamics. Life, Vol: 9

Megyeri M., Prasad R., Volpert G., Sliwa-Gonzalez A., Haribowo A. G., Aguilera-Romero A., Riezman H., Barral Y., Futerman A. H. & Schuldiner M. (2019). Yeast ceramide synthases, Lag1 and Lac1, have distinct substrate specificity. Journal of Cell Science, Vol: 132

Garcia-Campos M. A., Edelheit S., Toth U., Safra M., Shachar R., Viukov S., Winkler R., Nir R., Lasman L., Brandis A., Hanna J. H., Rossmanith W. & Schwartz S. (2019). Deciphering the "m6A Code" via Antibody-Independent Quantitative Profiling. Cell, Vol: 178, Page: 731-747

Lee H., Bao S., Qian Y., Geula S., Leslie J., Zhang C., Hanna J. H. & Ding L. (2019). Stage-specific requirement for Mettl3-dependent m(6)A mRNA methylation during haematopoietic stem cell differentiation. Nature Cell Biology, Vol: 21, Page: 700-709

Stokar-Avihail A., Tal N., Erez Z., Lopatina A. & Sorek R. (2019). Widespread Utilization of Peptide Communication in Phages Infecting Soil and Pathogenic Bacteria. Cell Host & Microbe, Vol: 25, Page: 746-755.e5

Gershoni M., Hauser R., Barda S., Lehavi O., Arama E., Pietrokovski S. & Kleiman S. E. (2019). A new MEIOB mutation is a recurrent cause for azoospermia and testicular meiotic arrest. Human Reproduction, Vol: 34, Page: 666-671

Reichenstein I., Eitan C., Diaz-Garcia S., Haim G., Magen I., Siany A., Hoye M. L., Rivkin N., Olender T., Toth B., Ravid R., Mandelbaum A. D., Yanowski E., Liang J., Rymer J. K., Levy R., Beck G., Ainbinder E., Farhan S. M. K., Lennox K. A., Bode N. M., Behlke M. A., Moller T., Saxena S., Moreno C. A. M., Costaguta G., van Eijk K. R., Phatnani H., Al-Chalabi A., Basak A. N., van den Berg L. H., Hardiman O., Landers J. E., Mora J. S., Morrison K. E., Shaw P. J., Veldink J. H., Pfaff S. L., Yizhar O., Gross C., Brown R. H., Ravits J. M., Harms M. B., Miller T. M. & Hornstein E. (2019). Human genetics and neuropathology suggest a link between miR-218 and amyotrophic lateral sclerosis pathophysiology. Science Translational Medicine, Vol: 11

Poole E., Huang C. J. Z., Forbester J., Shnayder M., Nachshon A., Kweider B., Basaj A., Smith D., Jackson S. E., Liu B., Shih J., Kiskin F. N., Roche K., Murphy E., Wills M. R., Morrell N. W., Dougan G., Stern-Ginossar N., Rana A. A. & Sinclair J. (2019). An iPSC-Derived Myeloid Lineage Model of Herpes Virus Latency and Reactivation. Frontiers in Microbiology, Vol: 10

Ben-Reuven L. & Reiner O. (2019). Dynamics of cortical progenitors and production of subcerebral neurons are altered in embryos of a maternal inflammation model for autism. Molecular Psychiatry

Dahary D., Golan Y., Mazor Y., Zelig O., Barshir R., Twik M., Stein T. I., Rosner G., Kariv R., Chen F., Zhang Q., Shen Y., Safran M., Lancet D. & Fishilevich S. (2019). Genome analysis and knowledge-driven variant interpretation with TGex. BMC Medical Genomics, Vol: 12

Castells-Ballester J., Rinis N., Kotan I., Gal L., Bausewein D., Kats I., Zatorska E., Kramer G., Bukau B., Schuldiner M. & Strahl S. (2019). Translational Regulation of Pmt1 and Pmt2 by Bfr1 Affects Unfolded Protein O-Mannosylation. International Journal of Molecular Sciences, Vol: 20

Obiedat A., Charpak-Amikam Y., Tai-Schmiedel J., Seidel E., Mahameed M., Avril T., Stern-Ginossar N., Springuel L., Bolsee J., Gilham D. E., Dipta P., Shmuel M., Chevet E., Mandelboim O. & Tirosh B. (2019). The integrated stress response promotes B7H6 expression. Journal of Molecular Medicine, Vol: 98, Page: 135-148

Rahimi N., Averbukh I., Carmon S., Schejter E. D., Barkai N. & Shilo B. (2019). Dynamics of Spaetzle morphogen shuttling in the Drosophila embryo shapes gastrulation patterning. Development, Vol: 146

Reuven N., Adler J., Broennimann K., Myers N. & Shaul Y. (2019). Recruitment of DNA Repair MRN Complex by Intrinsically Disordered Protein Domain Fused to Cas9 Improves Efficiency of CRISPR-Mediated Genome Editing. Biomolecules, Vol: 9

Bhagawati M., Terhorst T. M. E., Fuesser F., Hoffmann S., Pasch T., Pietrokovski S. & Mootz H. D. (2019). A mesophilic cysteine-less split intein for protein trans-splicing applications under oxidizing conditions. Proceedings of the National Academy of Sciences of the United States of America, Vol: 116, Page: 22164-22172

Chao J. T., Pina F., Onishi M., Cohen Y., Lai Y., Schuldiner M. & Niwa M. (2019). Transfer of the Septin Ring to Cytokinetic Remnants in ER Stress Directs Age-Sensitive Cell-Cycle Re-entry. Developmental Cell, Vol: 51, Page: 173-191

Odendall F., Backes S., Tatsuta T., Weill U., Schuldiner M., Langer T., Herrmann J. M., Rapaport D. & Dimmer K. S. (2019). The mitochondrial intermembrane space-facing proteins Mcp2 and Tgl2 are involved in yeast lipid metabolism. Molecular Biology of the Cell, Vol: 30, Page: 2681-2694

Srivastava S., Nataraj N. B., Sekar A., Ghosh S., Bornstein C., Drago-Garcia D., Roth L., Romaniello D., Marrocco I., David E., Gilad Y., Lauriola M., Rotkopf R., Kimchi A., Haga Y., Tsutsumi Y., Mirabeau O., Surdez D., Zinovyev A., Delattre O., Kovar H., Amit I. & Yarden Y. (2019). ETS Proteins Bind with Glucocorticoid Receptors: Relevance for Treatment of Ewing Sarcoma. Cell Reports, Vol: 29, Page: 104-117

Mikl M., Hamburg A., Pilpel Y. & Segal E. (2019). Dissecting splicing decisions and cell-to-cell variability with designed sequence libraries. Nature Communications, Vol: 10

Sapir T., Barakat T. S., Paredes M. F., Lerman-Sagie T., Aronica E., Klonowski W., Nguyen L., Ben Zeev B., Bahi-Buisson N., Leventer R., Rachmian N. & Reiner O. (2019). Building Bridges Between the Clinic and the Laboratory: A Meeting Review - Brain Malformations: A Roadmap for Future Research. Frontiers in Cellular Neuroscience, Vol: 13

Eliyahu E., Tirosh O., Dobesova M., Nachshon A., Schwartz M. & Stern-Ginossar N. (2019). Rho-Associated Coiled-Coil Kinase 1 Translocates to the Nucleus and Inhibits Human Cytomegalovirus Propagation. Journal of Virology, Vol: 93

Liu H., Begik O., Lucas M. C., Ramirez J. M., Mason C. E., Wiener D., Schwartz S., Mattick J. S., Smith M. A. & Novoa E. M. (2019). Accurate detection of m6A RNA modifications in native RNA sequences. Nature Communications, Vol: 10

Frumkin I., Yofe I., Bar-Ziv R., Gurvich Y., Lu Y., Voichek Y., Towers R., Schirman D., Krebber H. & Pilpel Y. (2019). Evolution of intron splicing towards optimized gene expression is based on various Cis- and Trans-molecular mechanisms. PLoS Biology, Vol: 17

Buiga P., Elson A., Tabernero L. & Schwartz J. M. (2019). Kinetic modeling of DUSP regulation in herceptin-resistant HER2-positive breast cancer. Genes, Vol: 10

Haimovich G. & Gerst J. E. (2019). Detection of mRNA Transfer Between Mammalian Cells in Coculture by Single-Molecule Fluorescent In Situ Hybridization (smFISH). , Page: 109-129

Keidar L., Gerlitz G., Kshirsagar A., Tsoory M., Olender T., Wang X., Yang Y., Chen Y., Yang Y., Voineagu I. & Reiner O. (2019). Interplay of LIS1 and MeCP2: Interactions and Implications With the Neurodevelopmental Disorders Lissencephaly and Rett Syndrome. Frontiers in Cellular Neuroscience, Vol: 13

Cohen-Zontag O., Baez C., Lim L. Q. J., Olender T., Schirman D., Dahary D., Pilpel Y. & Gerst J. E. (2019). A secretion-enhancing cis regulatory targeting element (SECReTE) involved in mRNA localization and protein synthesis. PLoS Genetics, Vol: 15

Eyal S., Kult S., Rubin S., Krief S., Felsenthal N., Pineault K. M., Leshkowitz D., Salame T., Addadi Y., Wellik D. M. & Zelzer E. (2019). Bone morphology is regulated modularly by global and regional genetic programs. Development, Vol: 146

Eyal S. & Zelzer E. (2019). The people behind the papers - Shai Eyal and Elazar Zelzer. Development, Vol: 146

Bykov Y. S., Cohen N., Gabrielli N., Manenschijn H., Welsch S., Chlanda P., Kukulski W., Patil K. R., Schuldiner M. & Briggs J. A. G. (2019). High-throughput ultrastructure screening using electron microscopy and fluorescent barcoding. Journal of Cell Biology, Vol: 218, Page: 2797-2811

Karzbrun E. & Reiner O. (2019). Brain organoidsA bottom-up approach for studying human neurodevelopment. Bioengineering, Vol: 6

Weill U., Cohen N., Fadel A., Ben-Dor S. & Schuldiner M. (2019). Protein Topology Prediction Algorithms Systematically Investigated in the Yeast Saccharomyces cerevisiae. BioEssays, Vol: 41

Barshad G., Zlotnikov-Poznianski N., Gal L., Schuldiner M. & Mishmar D. (2019). Disease-causing mutations in subunits of OXPHOS complex I affect certain physical interactions. Scientific Reports, Vol: 9

Buiga P., Elson A., Tabernero L. & Schwartz J. (2019). Modelling the role of dual specificity phosphatases in herceptin resistant breast cancer cell lines. Computational Biology and Chemistry, Vol: 80, Page: 138-146

Oz-Levi D., Olender T., Bar-Joseph I., Zhu Y., Marek-Yagel D., Barozzi I., Osterwalder M., Alkelai A., Ruzzo E. K., Han Y., Vos E. S. M., Reznik-Wolf H., Hartman C., Shamir R., Weiss B., Shapiro R., Pode-Shakked B., Tatarskyy P., Milgrom R., Schvimer M., Barshack I., Imai D. M., Coleman-Derr D., Dickel D. E., Nord A. S., Afzal V., van Bueren K. L., Barnes R. M., Black B. L., Mayhew C. N., Kuhar M. F., Pitstick A., Tekman M., Stanescu H. C., Wells J. M., Kleta R., de laat W., Goldstein D. B., Pras E., Visel A., Lancet D., Anikster Y. & Pennacchio L. A. (2019). Noncoding deletions reveal a gene that is critical for intestinal function. Nature, Vol: 571, Page: 107-111

Shiloh R., Bialik S. & Kimchi A. (2019). Ser289 phosphorylation activates both DAPK1 and DAPK2 but in response to different intracellular signaling pathways. Cell Cycle, Vol: 18, Page: 1169-1176

Mandelbaum A. D., Kredo-Russo S., Aronowitz D., Myers N., Yanowski E., Klochendler A., Swisa A., Dor Y. & Hornstein E. (2019). miR-17-92 and miR-106b-25 clusters regulate beta cell mitotic checkpoint and insulin secretion in mice. Diabetologia, Vol: 62, Page: 1653-1666

Hall A., Choi K., Liu W., Rose J., Zhao C., Yu Y., Na Y., Cai Y., Coover R. A., Lin Y., Dombi E., Kim M., Levanon D., Groner Y., Boscolo E., Pan D., Liu P. P., Lu Q. R., Ratner N., Huang G. & Wu J. (2019). RUNX represses Pmp22 to drive neurofibromagenesis. Science Advances, Vol: 5

Shani T. & Hanna J. H. (2019). Universally non-immunogenic iPSCs. Nature Biomedical Engineering, Vol: 3, Page: 337-338

Ben-Zvi D. S. & Volk T. (2019). Escort cell encapsulation of Drosophila germline cells is maintained by irre cell recognition module proteins. Biology Open, Vol: 8

Schwartz M. & Stern-Ginossar N. (2019). The Transcriptome of Latent Human Cytomegalovirus. Journal of Virology, Vol: 93

Malakar P., Stein I., Saragovi A., Winkler R., Stern-Ginossar N., Berger M., Pikarsky E. & Karni R. (2019). Long Noncoding RNA MALAT1 Regulates Cancer Glucose Metabolism by Enhancing mTOR-Mediated Translation of TCF7L2. Cancer Research, Vol: 79, Page: 2480-2493

Kaminski Strauss S., Schirman D., Jona G., Brooks A. N., Kunjapur A. M., Ba A. N. N., Flint A., Solt A., Mershin A., Dixit A., Yona A. H., Csorgo B., Busby B. P., Hennig B. P., Pal C., Schraivogel D., Schultz D., Wernick D. G., Agashe D., Levi D., Zabezhinsky D., Russ D., Sass E., Tamar E., Herz E., Levy E. D., Church G. M., Yelin I., Nachman I., Gerst J. E., Georgeson J. M., Adamala K. P., Steinmetz L. M., Ruebsam M., Ralser M., Klutstein M., Desai M. M., Walunjkar N., Yin N., Hefetz N. A., Jakimo N., Snitser O., Adini O., Kumar P., Smith R. S. H., Zeidan R., Hazan R., Rak R., Kishony R., Johnson S., Nouriel S., Vonesch S. C., Foster S., Dagan T., Wein T., Karydis T., Wannier T. M., Stiles T., Olin-Sandoval V., Mueller W. F., Bar-On Y. M., Dahan O. & Pilpel Y. (2019). Evolthon: A community endeavor to evolve lab evolution. PLoS Biology, Vol: 17

Teufel L., Tummler K., Floettmann M., Herrmann A., Barkai N. & Klipp E. (2019). A transcriptome-wide analysis deciphers distinct roles of G1 cyclins in temporal organization of the yeast cell cycle. Scientific Reports, Vol: 9

Sas-Chen A. & Schwartz S. (2019). Misincorporation signatures for detecting modifications in mRNA: Not as simple as it sounds. Methods, Vol: 156, Page: 53-59

Chan S. M., Sapir T., Park S., Rual J., Contreras-Galindo R., Reiner O. & Markovitz D. M. (2019). The HERV-K accessory protein Np9 controls viability and migration of teratocarcinoma cells. PLoS ONE, Vol: 14

Eyal S., Rubin S., Krief S., Levin L. & Zelzer E. (2019). Common cellular origin and diverging developmental programs for different sesamoid bones. Development, Vol: 146

Adashi E. Y., Cohen I. G., Hanna J. H., Surani A. M. & Hayashi K. (2019). Stem Cell-Derived Human Gametes: The Public Engagement Imperative. Trends in Molecular Medicine, Vol: 25, Page: 165-167

Averbuch D., Safadi R., Dar D., Wolf D., Cherniak M., Sorek R. & Amit S. (2019). Successful Brincidofovir Treatment of Metagenomics-detected Adenovirus Infection in a Severely Ill Signal Transducer and Activator of Transcription-1-deficient Patient. Pediatric Infectious Disease Journal, Vol: 38, Page: 297-299

Cohen-Sharir Y., Kuperman Y., Apelblat D., den Hertog J., Spiegel I., Knobler H. & Elson A. (2019). Protein tyrosine phosphatase alpha inhibits hypothalamic leptin receptor signaling and regulates body weight in vivo. FASEB Journal, Vol: 33, Page: 5101-5111

Lubelsky Y. & Shaul Y. (2019). Recruitment of the protein phosphatase-1 catalytic subunit to promoters by the dual-function transcription factor RFX1. Biochemical and Biophysical Research Communications, Vol: 509, Page: 1015-1020

Tazelaar G. S. H. P., Dekker A. M., van Vugt J. J. F. A., van der Spek R. A., Westeneng H., Kool L. J. B. G., Kenna K. P., van Rheenen W., Pulit S. L., McLaughlin R. L., Sproviero W., Iacoangeli A., Huebers A., Brenner D., Morrison K. E., Shaw P. J., Shaw C. E., Povedano Panades M., Mora Pardina J. S., Glass J. D., Hardiman O., Al-Chalabi A., van Damme P., Robberecht W., Landers J. E., Ludolph A. C., Weishaupt J. H., van den Berg L. H., Veldink J. H., van Es M. A., Akcimen F., Al Khleifat A., Andersen P., Basak A. N., Bauer D. C., Blair I., Brands W. J., Byrne R. P., Calvo A., Gonzalez Y. C., Chio A., Cooper-Knock J., Corcia P., Couratier P., de Carvalho M., Drory V. E., Eitan C., Garcia Redondo A., Gellera C. & Hornstein E. (2019). Association of NIPA1 repeat expansions with amyotrophic lateral sclerosis in a large international cohort. Neurobiology of Aging, Vol: 74, Page: 234.e9-234.e15

Amann R. I., Baichoo S., Blencowe B. J., Bork P., Borodovsky M., Brooksbank C., Chain P. S. G., Colwell R. R., Daffonchio D. G., Danchin A., de Lorenzo V., Dorrestein P. C., Finn R. D., Fraser C. M., Gilbert J. A., Hallam S. J., Hugenholtz P., Ioannidis J. P. A., Jansson J. K., Kim J. F., Klenk H., Klotz M. G., Knight R., Konstantinidis K. T., Kyrpides N. C., Mason C. E., McHardy A. C., Meyer F., Ouzounis C. A., Patrinos A. A. N., Podar M., Pollard K. S., Ravel J., Munoz A. R., Roberts R. J., Rossello-Mora R., Sansone S., Schloss P. D., Schriml L. M., Setubal J. C., Sorek R., Stevens R. L., Tiedje J. M., Turjanski A., Tyson G. W., Ussery D. W., Weinstock G. M., White O., Whitman W. B. & Xenarios I. (2019). Toward unrestricted use of public genomic data: Publication interests should not limit access to public data. Science, Vol: 363, Page: 350-352

Antunes D., Chowdhury A., Aich A., Saladi S., Harpaz N., Stahl M., Schuldiner M., Herrmann J. M., Rehling P. & Rapaport D. (2019). Overexpression of branched-chain amino acid aminotransferases rescues the growth defects of cells lacking the Barth syndrome-related gene TAZ1. Journal Of Molecular Medicine-Jmm, Vol: 97, Page: 269-279

Nuta G. C., Gilad Y., Gershoni M., Sznajderman A., Schlesinger T., Bialik S., Eisenstein M., Pietrokovski S. & Kimchi A. (2019). A cancer associated somatic mutation in LC3B attenuates its binding to E1-like ATG7 protein and subsequent lipidation. Autophagy, Vol: 15, Page: 438-452

Roth L., Wakim J., Wasserman E., Shalev M., Arman E., Stein M., Brumfeld V., Sagum C. A., Bedford M. T., Tuckermann J. & Elson A. (2019). Phosphorylation of the phosphatase PTPROt at Tyr(399) is a molecular switch that controls osteoclast activity and bone mass in vivo. Science Signaling, Vol: 12

Shalev M. & Elson A. (2019). The roles of protein tyrosine phosphatases in bone-resorbing osteoclasts. Biochimica Et Biophysica Acta-Molecular Cell Research, Vol: 1866, Page: 114-123

Reuven N., Shanzer M. & Shaul Y. (2019). Hippo Pathway Regulation by Tyrosine Kinases. , Page: 215-236

Laufman O., Perrino J. & Andino R. (2019). Viral Generated Inter-Organelle Contacts Redirect Lipid Flux for Genome Replication. Cell (Cambridge), Vol: 178, Page: 275-289.e16

Diep J., Ooi Y. S., Wilkinson A. W., Peters C. E., Foy E., Johnson J. R., Zengel J., Ding S., Weng K., Laufman O., Jang G., Xu J., Young T., Verschueren E., Kobluk K. J., Elias J. E., Sarnow P., Greenberg H. B., Hüttenhain R., Andino R., Nagamine C. M., Krogan N. J., Gozani O. & Carette J. E. (2019). Enterovirus pathogenesis requires the host methyltransferase SETD3. Nature Microbiology, Vol: 4, Page: 2523-2537

Lewis V. M., Saunders L. M., Larson T. A., Bain E. J., Sturiale S. L., Gur D., Chowdhury S., Flynn J. D., Allen M. C., Deheyn D. D., Lee J. C., Simon J. A., Lippincott-Schwartz J., Raible D. W. & Parichy D. M. (2019). Fate plasticity and reprogramming in genetically distinct populations of Danio leucophores. Proceedings of the National Academy of Sciences of the United States of America, Vol: 116, Page: 11806-11811

Eisenberg-Bord M., Tsui H. S., Antunes D., Fernández-del-Río L., Bradley M. C., Dunn C. D., Nguyen T. P., Rapaport D., Clarke C. F. & Schuldiner M. (2019). The Endoplasmic Reticulum-Mitochondria Encounter Structure Complex Coordinates Coenzyme Q Biosynthesis. Contact, Vol: 2

Chapal M., Mintzer S., Brodsky S., Carmi M. & Barkai N. (2019). Resolving noise-control conflict by gene duplication. PLoS Biology, Vol: 17

Li J., Breker M., Graham M., Schuldiner M. & Hochstrasser M. (2019). AMPK regulates ESCRT-dependent microautophagy of proteasomes concomitant with proteasome storage granule assembly during glucose starvation. PLoS Genetics, Vol: 15

Tam O. H., Rozhkov N. V., Shaw R., Kim D., Hubbard I., Fennessey S., Propp N., Phatnani H., Kwan J., Sareen D., Broach J. R., Simmons Z., Arcila-Londono X., Lee E. B., Van Deerlin V. M., Shneider N. A., Fraenkel E., Ostrow L. W., Baas F. & Hornstein E. (2019). Postmortem Cortex Samples Identify Distinct Molecular Subtypes of ALS: Retrotransposon Activation, Oxidative Stress, and Activated Glia. Cell Reports, Vol: 29, Page: 1164-1177.e5

Johnson A. G., Wein T., Mayer M. L., Duncan-Lowey B., Yirmiya E., Oppenheimer-Shaanan Y., Amitai G., Sorek R. & Kranzusch P. J. (2022). Bacterial gasdermins reveal an ancient mechanism of cell death. Science (American Association for the Advancement of Science), Vol: 375, Page: 221-225

Rozman B., Nachshon A., Levi Samia R., Lavi M., Schwartz M. & Stern-Ginossar N. (2022). Temporal dynamics of HCMV gene expression in lytic and latent infections. Cell reports (Cambridge), Vol: 39

Nair R. R., Haimovich G. & Gerst J. E. (2022). An Aptamer-based mRNA Affinity Purification Procedure (RaPID) for the Identification of Associated RNAs (RaPID-seq) and Proteins (RaPID-MS) in Yeast. Bio-Protocol, Vol: 12

Rebelo-Guiomar P., Pellegrino S., Dent K. C., Sas-Chen A., Miller-Fleming L., Garone C., Van Haute L., Rogan J. F., Dinan A., Firth A. E., Andrews B., Whitworth A. J., Schwartz S., Warren A. J. & Minczuk M. (2022). A late-stage assembly checkpoint of the human mitochondrial ribosome large subunit. Nature Communications, Vol: 13

Halimi R., Levin-Zaidman S., Levin-Salomon V., Bialik S. & Kimchi A. (2022). Epiblast fragmentation by shedding-a novel mechanism to eliminate cells in post-implantation mouse embryos. Cell Death and Differentiation, Vol: 29, Page: 1255-1266

Hammer L., Levin-Salomon V., Yaeli-Slonim N., Weiss M., Dekel-Bird N. P., Olender T., Porat Z., Winograd-Katz S., Savidor A., Levin Y., Bialik S., Geiger B. & Kimchi A. (2022). A new function for the serine protease HtrA2 in controlling radiation-induced senescence in cancer cells. Molecular Oncology, Vol: 16, Page: 1365-1383

Maciag K., Raychowdhury R., Smith K., Schneider A. M., Coers J., Mumbach M. R., Schwartz S. & Hacohen N. (2022). IRF3 inhibits IFN-γ-mediated restriction of intracellular pathogens in macrophages independently of IFNAR. Journal of Leukocyte Biology, Vol: 112, Page: 257-271

Gera T., Jonas F., More R. & Barkai N. (2022). Evolution of binding preferences among whole-genome duplicated transcription factors. eLife, Vol: 11

Hobbs S. J., Wein T., Lu A., Morehouse B. R., Schnabel J., Leavitt A., Yirmiya E., Sorek R. & Kranzusch P. J. (2022). Phage anti-CBASS and anti-Pycsar nucleases subvert bacterial immunity. Nature (London), Vol: 605, Page: 522-526

Wein T. & Sorek R. (2022). Bacterial origins of human cell-autonomous innate immune mechanisms. Nature reviews. Immunology, Vol: 22, Page: 629-638

Israeli M., Finkel Y., Yahalom-Ronen Y., Paran N., Chitlaru T., Israeli O., Cohen-Gihon I., Aftalion M., Falach R., Rotem S., Elia U., Nemet I., Kliker L., Mandelboim M., Beth-Din A., Israely T., Cohen O., Stern-Ginossar N. & Bercovich-Kinori A. (2022). Genome-wide CRISPR screens identify GATA6 as a proviral host factor for SARS-CoV-2 via modulation of ACE2. Nature Communications, Vol: 13

Tal N. & Sorek R. (2022). SnapShot: Bacterial immunity. Cell, Vol: 185, Page: 578-578.e1

Yanowski E., Yacovzada N. S., David E., Giladi A., Jaitin D., Farack L., Egozi A., Ben-Zvi D., Itzkovitz S., Amit I. & Hornstein E. (2022). Physically interacting beta-delta pairs in the regenerating pancreas revealed by single-cell sequencing. Molecular metabolism (Germany), Vol: 60

Grenov A., Hezroni H., Lasman L., Hanna J. H. & Shulman Z. (2022). YTHDF2 suppresses the plasmablast genetic program and promotes germinal center formation. Cell reports (Cambridge), Vol: 39

Magen I., Aharoni S., Yacovzada N. S., Tokatly Latzer I., Alves C. R. R., Sagi L., Fattal-Valevski A., Swoboda K. J., Katz J., Bruckheimer E., Nevo Y. & Hornstein E. (2022). Muscle microRNAs in the cerebrospinal fluid predict clinical response to nusinersen therapy in type II and type III spinal muscular atrophy patients. European Journal of Neurology, Vol: 29, Page: 2420-2430

Strobelt R., Adler J., Paran N., Yahalom-Ronen Y., Melamed S., Politi B., Shulman Z., Schmiedel D. & Shaul Y. (2022). Imatinib inhibits SARS-CoV-2 infection by an off-target-mechanism. Scientific Reports, Vol: 12

Su C. J., Murugan A., Linton J. M., Yeluri A., Bois J., Klumpe H., Langley M. A., Antebi Y. E. & Elowitz M. B. (2022). Ligand-receptor promiscuity enables cellular addressing. Cell Systems, Vol: 13, Page: 408-425.e12

Cassotta M., Geerts H., Harbom L., Outeiro T. F., Pediaditakis I., Reiner O., Schildknecht S., Schwamborn J. C., Bailey J., Herrmann K. & Hogberg H. T. (2022). The Future of Parkinson's Disease Research: A New Paradigm of Human Specific Investigation Is Necessary and Possible. ALTEX, alternatives to animal experimentation, Vol: 39, Page: 694-709

Sapir T., Sela-Donenfeld D., Karlinski M. & Reiner O. (2022). Brain Organization and Human Diseases. Cells (Basel, Switzerland), Vol: 11

Fisher T., Gluck A., Narayanan K., Kuroda M., Nachshon A., Hsu J. C., Halfmann P. J., Yahalom-Ronen Y., Tamir H., Finkel Y., Schwartz M., Weiss S., Tseng C. K., Israely T., Paran N., Kawaoka Y., Makino S. & Stern-Ginossar N. (2022). Parsing the role of NSP1 in SARS-CoV-2 infection. Cell reports (Cambridge), Vol: 39

Bisinski D. D., Gomes Castro I., Mari M., Walter S., Fröhlich F., Schuldiner M. & González Montoro A. (2022). Cvm1 is a component of multiple vacuolar contact sites required for sphingolipid homeostasis. Journal of Cell Biology, Vol: 221

Zalckvar E. & Schuldiner M. (2022). Beyond rare disorders: A new era for peroxisomal pathophysiology. Molecular Cell, Vol: 82, Page: 2228-2235

Kahana A., Lancet D. & Palmai Z. (2022). Micellar Composition Affects Lipid Accretion Kinetics in Molecular Dynamics Simulations: Support for Lipid Network Reproduction. Life (Basel, Switzerland), Vol: 12

Sapir T., Kshirsagar A., Gorelik A., Olender T., Porat Z., Scheffer I. E., Goldstein D. B., Devinsky O. & Reiner O. (2022). Heterogeneous nuclear ribonucleoprotein U (HNRNPU) safeguards the developing mouse cortex. Nature Communications, Vol: 13

Rajan K. S., Adler K., Doniger T., Cohen-Chalamish S., Aharon-Hefetz N., Aryal S., Pilpel Y., Tschudi C., Unger R. & Michaeli S. (2022). Identification and functional implications of pseudouridine RNA modification on small non-coding RNAs in the mammalian pathogen Trypanosoma brucei. The journal of Biological chemistry, Vol: 298

Tarazi S., Aguilera Castrejon A., Joubran C., Ghanem N., Ashouokhi S., Roncato F., Wildschutz E., Haddad M., Oldak B., Gomez-Cesar E., Livnat N., Viukov S., Lukshtanov D., Naveh Tassa S., Rose M., Issaq - Hanna S., Raanan C., Brenner O. J., Kedmi M., Keren-Shaul H., Lapidot T., Maza I., Novershtern N. & Hanna J. (. (2022). Post-Gastrulation Synthetic Embryos Generated Ex Utero from Mouse Naïve ESCs. Cell, Vol: 185, Page: 3290-3306.e25

Broennimann K., Ricardo-Lax I., Adler J. & Shaul Y. (2022). Evidence for a Hepatitis B Virus Short RNA Fragment Directly Targeting the Cellular RRM2 Gene. Cells (Basel, Switzerland), Vol: 11

Federici S., Kredo-Russo S., Valdes Mas R., Kviatcovsky D., Weinstock E., Matiuhin Y., Silberberg Y., Atarashi K., Furuichi M., Oka A., Liu B., Fibelman M., Weiner I., Khabra E., Cullin N., Ben-Yishai N., Inbar D., Ben David H., Nicenboim J., Kowalsman N., Lieb W., Kario E., Cohen T., Friedman Geffen Y., Zelcbuch L., Cohen A., Rappo U., Gahali-Sass I., Golembo M., Lev Goldman V., Dori-Bachash M., Shapiro H., Moresi C., Cuevas Sierra A., Mohapatra G., Kern L., Zheng D., Nobs S. P., Suez J., Harmelin A., Stettner N., Zak N., Puttagunta S., Bassan M., Honda K., Sokol H., Bang C., Franke A., Schramm C., Maharshak N., Balfour Sartor R., Sorek R. & Elinav E. (2022). Targeted suppression of human IBD-associated gut microbiota commensals by phage consortia for treatment of intestinal inflammation. Cell, Vol: 185, Page: 2879-2898.e24

Dekel-Bird N. P., Bialik S., Itzhaki O., Meir Salame T., Yaeli-Slonim N., Levin-Salomon V., Dasari S. K., Besser M. & Kimchi A. (2022). A Functional Pre-Screening Platform for Identifying Points of Vulnerability in the Cell Death Map of Human Melanoma Tumors. Journal of Cancer Science and Clinical Therapeutics, Vol: 6, Page: 39-60

Amzallag E. & Hornstein E. (2022). Crosstalk between Biomolecular Condensates and Proteostasis. Cells (Basel, Switzerland), Vol: 11

Salaroglio I. C., Belisario D. C., Akman M., La Vecchia S., Godel M., Anobile D. P., Ortone G., Digiovanni S., Fontana S., Costamagna C., Rubinstein M., Kopecka J. & Riganti C. (2022). Mitochondrial ROS drive resistance to chemotherapy and immune-killing in hypoxic non-small cell lung cancer. Journal of Experimental and Clinical Cancer Research, Vol: 41

Dagan Y., Yesharim Y., Bonneau A. R., Frankovits T., Schwartz S., Reddien P. W. & Wurtzel O. (2022). m6A is required for resolving progenitor identity during planarian stem cell differentiation. EMBO Journal, Vol: 41

Domínguez-Sala E., Valdés-Sánchez L., Canals S., Reiner O., Pombero A., García-López R., Estirado A., Pastor D., Geijo-Barrientos E. & Martínez S. (2022). Abnormalities in Cortical GABAergic Interneurons of the Primary Motor Cortex Caused by Lis1 (Pafah1b1) Mutation Produce a Non-drastic Functional Phenotype. Frontiers in Cell and Developmental Biology, Vol: 10

Elson A., Anuj A., Barnea-Zohar M. & Reuven N. (2022). The origins and formation of bone-resorbing osteoclasts. Bone (New York, N.Y.), Vol: 164

Klumpe H. E., Langley M. A., Linton J. M., Su C. J., Antebi Y. E. & Elowitz M. B. (2022). The context-dependent, combinatorial logic of BMP signaling. Cell Systems, Vol: 13, Page: 388-407.e10

David M., Olender T., Mizrahi O., Weingarten-Gabbay S., Friedlander G., Meril S., Goldberg N., Savidor A., Levin Y., Salomon V., Stern-Ginossar N., Bialik S. & Kimchi A. (2022). DAP5 drives translation of specific mRNA targets with upstream ORFs in human embryonic stem cells. RNA (Cambridge), Vol: 28, Page: 1325-1336

Garb J., Lopatina A., Bernheim A., Zaremba M., Siksnys V., Melamed S., Leavitt A., Millman A., Amitai G. & Sorek R. (2022). Multiple phage resistance systems inhibit infection via SIR2-dependent NAD+ depletion. Nature Microbiology, Vol: 7, Page: 1849-1856

Amadei G., Handford C. E., Qiu C., De Jonghe J., Greenfeld H., Tran M., Martin B. K., Chen D., Aguilera-Castrejon A., Hanna J. H., Elowitz M., Hollfelder F., Shendure J., Glover D. M. & Zernicka-Goetz M. (2022). Embryo model completes gastrulation to neurulation and organogenesis. Nature (London), Vol: 610, Page: 143-153

Volfovitch Y., Tsur A. M., Gurevitch M., Novick D., Rabinowitz R., Mandel M., Achiron A., Rubinstein M., Shoenfeld Y. & Amital H. (2022). The intercorrelations between blood levels of ferritin, sCD163, and IL-18 in COVID-19 patients and their association to prognosis. Immunologic Research, Vol: 70, Page: 817-828

Viukov S., Shani T., Bayerl J., Aguilera-Castrejon A., Oldak B., Sheban D., Tarazi S., Stelzer Y., Hanna J. H. & Novershtern N. (2022). Human primed and naïve PSCs are both able to differentiate into trophoblast stem cells. Stem Cell Reports, Vol: 17, Page: 2484-2500

Oldak B., Aguilera-Castrejon A. & Hanna J. H. (2022). Recent insights into mammalian natural and synthetic ex utero embryogenesis. Current opinion in genetics & development, Vol: 77

Reuven N. & Shaul Y. (2022). Selecting for CRISPR-Edited Knock-In Cells. International Journal of Molecular Sciences, Vol: 23

Leavitt A., Yirmiya E., Amitai G., Lu A., Garb J., Herbst E., Morehouse B. R., Hobbs S. J., Antine S. P., Sun Z. J., Kranzusch P. J. & Sorek R. (2022). Viruses inhibit TIR gcADPR signalling to overcome bacterial defence. Nature (London), Vol: 611, Page: 326-331

Eitan C., Siany A., Barkan E., Olender T., Yanowski E., Marmor-Kollet H., Chapnik E., Ainbinder E., Ben-Dor S., Segal E. & Hornstein E. (2022). Whole-genome sequencing reveals that variants in the Interleukin 18 Receptor Accessory Protein 3UTR protect against ALS. Nature Neuroscience, Vol: 25, Page: 433-445

Jonas F., Yaakov G. & Barkai N. (2022). Rtt109 promotes nucleosome replacement ahead of the replication fork. Genome Research, Vol: 32, Page: 1089-1098

Tal N., Millman A., Stokar Avihail A., Fedorenko T., Leavitt A., Melamed S., Yirmiya E., Avraham C., Brandis A., Mehlman T., Amitai G. & Sorek R. (2022). Bacteria deplete deoxynucleotides to defend against bacteriophage infection. Nature Microbiology, Vol: 7, Page: 1200-1209

Sathanantham P., Zhao W., He G., Austin M., Fenech E., Diaz A., Schuldiner M. & Wang X. (2022). A conserved viral amphipathic helix governs the replication site-specific membrane association. PLoS Pathogens, Vol: 18

Dekel C., Morey R., Hanna J., Laurent L. C., Ben-Yosef D. & Amir H. (2022). Stabilization of hESCs in two distinct substates along the continuum of pluripotency. iScience, Vol: 25

Narunsky-Haziza L., Sepich-Poore G. D., Livyatan I., Asraf O., Martino C., Nejman D., Gavert N., Stajich J. E., Amit G., González A., Wandro S., Perry G., Ariel R., Meltser A., Shaffer J. P., Zhu Q., Balint-Lahat N., Barshack I., Dadiani M., Gal-Yam E. N., Patel S. P., Bashan A., Swafford A. D., Pilpel Y., Knight R. & Straussman R. (2022). Pan-cancer analyses reveal cancer-type-specific fungal ecologies and bacteriome interactions. Cell, Vol: 185, Page: 3789-3806

Yifrach E., Rudowitz M., Cruz-Zaragoza L. D., Tirosh A., Gazi Z., Peleg Y., Kunze M., Eisenstein M., Schliebs W., Schuldiner M., Erdmann R. & Zalckvar E. (2022). Determining the targeting specificity of the selective peroxisomal targeting factor Pex9. Biological Chemistry, Vol: 404, Page: 121-133

Eyal Z., Deis R., Varsano N., Dezorella N., Rechav K., Houben L. & Gur D. (2022). Plate-like Guanine Biocrystals Form via Templated Nucleation of Crystal Leaflets on Preassembled Scaffolds. Journal of the American Chemical Society, Vol: 144, Page: 22440-22445

Gabzi T., Pilpel Y. & Friedlander T. (2022). Fitness Landscape Analysis of a tRNA Gene Reveals that the Wild Type Allele is Sub-optimal, Yet Mutationally Robust. Molecular Biology and Evolution, Vol: 39

Zaremba M., Dakineviciene D., Golovinas E., Zagorskaite E., Stankunas E., Lopatina A., Sorek R., Manakova E., Ruksenaite A., Silanskas A., Asmontas S., Grybauskas A., Tylenyte U., Jurgelaitis E., Grigaitis R., Timinskas K., Venclovas C. & Siksnys V. (2022). Short prokaryotic Argonautes provide defence against incoming mobile genetic elements through NAD(+) depletion. Nature Microbiology, Vol: 7, Page: 1857-1869

Reznik N., Gallo A. D., Rush K. W., Javitt G., Fridmann-Sirkis Y., Ilani T., Nairner N. A., Fishilevich S., Gokhman D., Chacón K. N., Franz K. J. & Fass D. (2022). Intestinal mucin is a chaperone of multivalent copper. Cell, Vol: 185, Page: 4206-4215.e11

Turner M., Danino Y., Barshai M., Yacovzada N., Cohen Y., Olender T., Rotkopf R., Monchaud D., Hornstein E. & Orenstein Y. (2022). rG4detector, a novel RNA G-quadruplex predictor, uncovers their impact on stress granule formation. Nucleic Acids Research, Vol: 50, Page: 11426-11441

Biran A., Myers N., Steinberger S., Adler J., Riutin M., Broennimann K., Reuven N. & Shaul Y. (2022). The C-Terminus of the PSMA3 Proteasome Subunit Preferentially Traps Intrinsically Disordered Proteins for Degradation. Cells (Basel, Switzerland), Vol: 11

Thalalla Gamage S., Bortolin-Cavaillé M., Link C., Bryson K., Sas-Chen A., Schwartz S., Cavaillé J. & Meier J. L. (2022). Antisense pairing and SNORD13 structure guide RNA cytidine acetylation. RNA, Vol: 28, Page: 1582-1596

Yifrach E., HolbrookSmith D., Bürgi J., Othman A., Eisenstein M., Roermund C. W., Visser W., Tirosh A., Rudowitz M., Bibi C., Galor S., Weill U., Fadel A., Peleg Y., Erdmann R., Waterham H. R., Wanders R. J. A., Wilmanns M., Zamboni N., Schuldiner M. & Zalckvar E. (2022). Systematic multi-level analysis of an organelle proteome reveals new peroxisomal functions. Molecular Systems Biology, Vol: 18

Vinestock R. C., Felsenthal N., Assaraf E., Katz E., Rubin S., Heinemann-Yerushalmi L., Krief S., Dezorella N., Levin-Zaidman S., Tsoory M., Thomopoulos S. & Zelzer E. (2022). Neonatal Enthesis Healing Involves Noninflammatory Acellular Scar Formation through Extracellular Matrix Secretion by Resident Cells. American Journal of Pathology, Vol: 192, Page: 1122-1135

Castro I. G., Shortill S. P., Dziurdzik S. K., Cadou A., Ganesan S., Valenti R., David Y., Davey M., Mattes C., Thomas F. B., Avraham R. E., Meyer H., Fadel A., Fenech E. J., Ernst R., Zaremberg V., Levine T. P., Stefan C., Conibear E. & Schuldiner M. (2022). Systematic analysis of membrane contact sites in Saccharomyces cerevisiae uncovers modulators of cellular lipid distribution. eLife, Vol: 11

Pasca S. P., Arlotta P., Bateup H. S., Camp J. G., Cappello S., Gage F. H., Knoblich J. A., Kriegstein A. R., Lancaster M. A., Ming G., Muotri A. R., Park I., Reiner O., Song H., Studer L., Temple S., Testa G., Treutlein B. & Vaccarino F. M. (2022). A nomenclature consensus for nervous system organoids and assembloids. Nature, Vol: 609, Page: 907-910

Millman A., Melamed S., Leavitt A., Doron S., Bernheim A., Hör J., Garb J., Bechon N., Brandis A., Lopatina A., Ofir G., Hochhauser D., Stokar-Avihail A., Tal N., Sharir S., Voichek M., Erez Z., Ferrer J. L. M., Dar D., Kacen A., Amitai G. & Sorek R. (2022). An expanded arsenal of immune systems that protect bacteria from phages. Cell Host and Microbe, Vol: 30, Page: 1556-1569e5

Chattopadhyay S., Garcia-Martinez J., Haimovich G., Fischer J., Khwaja A., Barkai O., Chuartzman S. G., Schuldiner M., Elran R., Rosenberg M. I., Urim S., Deshmukh S., Bohnsack K. E., Bohnsack M. T., Perez-Ortin J. E. & Choder M. (2022). RNA-controlled nucleocytoplasmic shuttling of mRNA decay factors regulates mRNA synthesis and a novel mRNA decay pathway. Nature Communications, Vol: 13

Nair R. R., Pataki E. & Gerst J. E. (2022). Transperons: RNA operons as effectors of coordinated gene expression in eukaryotes. Trends in Genetics, Vol: 38, Page: 1217-1227

Brown A. L., Wilkins O. G., Keuss M. J., Hill S. E., Zanovello M., Lee W. C., Bampton A., Lee F. C., Masino L., Qi Y. A., Bryce-Smith S., Gatt A., Hallegger M., Fagegaltier D., Phatnani H., Phatnani H., Kwan J., Sareen D., Broach J. R. & Hornstein E. (2022). TDP-43 loss and ALS-risk SNPs drive mis-splicing and depletion of UNC13A. Nature, Vol: 603, Page: 131-137

LeRoux M., Srikant S., Teodoro G. I., Zhang T., Littlehale M. L., Doron S., Badiee M., Leung A. K., Sorek R. & Laub M. T. (2022). The DarTG toxin-antitoxin system provides phage defence by ADP-ribosylating viral DNA. Nature Microbiology, Vol: 7, Page: 1028-1040

Šušnjar U., Škrabar N., Brown A. L., Abbassi Y., Phatnani H., Phatnani H., Fratta P., Kwan J., Sareen D., Broach J. R., Simmons Z., Arcila-Londono X., Lee E. B., Van Deerlin V. M., Shneider N. A., Fraenkel E., Ostrow L. W., Baas F., Hornstein E. & Menon V. (2022). Cell environment shapes TDP-43 function with implications in neuronal and muscle disease. Communications Biology, Vol: 5

Krieger G., Lupo O., Wittkopp P. & Barkai N. (2022). Evolution of transcription factor binding through sequence variations and turnover of binding sites. Genome Research, Vol: 32, Page: 1099-1111

Fang F., Xiao Y., Zelzer E., Leong K. W. & Thomopoulos S. (2022). A mineralizing pool of Gli1-expressing progenitors builds the tendon enthesis and demonstrates therapeutic potential. Cell Stem Cell, Vol: 29, Page: 1669-1684.e6

Nir R., Hoernes T. P., Muramatsu H., Faserl K., Karikó K., Erlacher M. D., Sas-Chen A. & Schwartz S. (2022). A systematic dissection of determinants and consequences of snoRNA-guided pseudouridylation of human mRNA. Nucleic Acids Research, Vol: 50, Page: 4900-4916

Bortolin-Cavaillé M. L., Quillien A., Gamage S. T., Thomas J. M., Sas-Chen A., Sharma S., Plisson-Chastang C., Vandel L., Blader P., Lafontaine D. L., Schwartz S., Meier J. L. & Cavaillé J. (2022). Probing small ribosomal subunit RNA helix 45 acetylation across eukaryotic evolution. Nucleic Acids Research, Vol: 50, Page: 6284-6299

De Vito F., Musella A., Fresegna D., Rizzo F. R., Gentile A., Stampanoni Bassi M., Gilio L., Buttari F., Procaccini C., Colamatteo A., Bullitta S., Guadalupi L., Caioli S., Vanni V., Balletta S., Sanna K., Bruno A., Dolcetti E., Furlan R., Finardi A., Licursi V., Drulovic J., Pekmezovic T., Fusco C., Bruzzaniti S., Hornstein E., Uccelli A., Salvetti M., Matarese G., Centonze D. & Mandolesi G. (2022). MiR-142-3p regulates synaptopathy-driven disease progression in multiple sclerosis. Neuropathology and Applied Neurobiology, Vol: 48

David Y., Castro I. G., Yifrach E., Bibi C., Katawi E., Har-Shai D. Y., Brodsky S., Barkai N., Ravid T., Eisenstein M., Pietrokovski S., Schuldiner M. & Zalckvar E. (2022). Pls1 Is a Peroxisomal Matrix Protein with a Role in Regulating Lysine Biosynthesis. Cells, Vol: 11

Zhang X., Lobinska G., Feldman M., Dekel E., Nowak M. A., Pilpel Y., Pauzner Y., Barzel B. & Pauzner A. (2022). A spatial vaccination strategy to reduce the risk of vaccine-resistant variants. PLoS Computational Biology, Vol: 18

Cappelli S., Spalloni A., Feiguin F., Visani G., Šušnjar U., Brown A. L., De Bardi M., Borsellino G., Secrier M., Phatnani H., Romano M., Fratta P., Longone P., Buratti E., Phatnani H., Kwan J., Sareen D., Broach J. R., Simmons Z. & Hornstein E. (2022). NOS1AP is a novel molecular target and critical factor in TDP-43 pathology. Brain Communications, Vol: 4

Pilpel Y. (2022). The History of Question Marks and Exclamation Marks across Languages: Punctuation Culturomics. Default journal, Page: 1-6

Cohen N., Kahana A. & Schuldiner M. (2022). A similarity-based method for predicting enzymatic functions in yeast uncovers a new AMP hydrolase. Journal of Molecular Biology, Vol: 434

Parichha A., Suresh V., Chatterjee M., Kshirsagar A., Ben-Reuven L., Olender T., Taketo M. M., Radosevic V., Bobic-Rasonja M., Trnski S., Holtzman M. J., Jovanov-Milosevic N., Reiner O. & Tole S. (2022). Constitutive activation of canonical Wnt signaling disrupts choroid plexus epithelial fate. Nature Communications, Vol: 13

Zhang S., Cooper-Knock J., Weimer A. K., Eitan C. & Hornstein E. (2022). Genome-wide identification of the genetic basis of amyotrophic lateral sclerosis. Neuron, Vol: 110, Page: 992-1008.e11

Uzonyi A., Nir R. & Schwartz S. (2022). Cloning of DNA oligo pools for in vitro expression. STAR Protocols, Vol: 3

Lorber D. & Volk T. (2022). Evaluation of chromatin mesoscale organization. APL Bioengineering, Vol: 6

Safran M., Rosen N., Twik M., BarShir R., Stein T. I., Dahary D., Fishilevich S. & Lancet D. (2022). The GeneCards Suite. , Page: 27-56

Dahan N., Bykov Y. S., Boydston E. A., Fadel A., Gazi Z., Hochberg-Laufer H., Martenson J., Denic V., Shav-Tal Y., Weissman J. S., Aviram N., Zalckvar E. & Schuldiner M. (2022). Peroxisome function relies on organelle-associated mRNA translation. Science advances, Vol: 8

Hassdenteufel S. & Schuldiner M. (2022). Show your true color: Mammalian cell surface staining for tracking cellular identity in multiplexing and beyond. Current Opinion in Chemical Biology, Vol: 66

Sheban D., Shani T., Maor R., Aguilera-Castrejon A., Mor N., Oldak B., Shmueli M. D., Eisenberg-Lerner A., Bayerl J., Hebert J., Viukov S., Chen G., Kacen A., Krupalnik V., Chugaeva V., Tarazi S., Rodríguez-delaRosa A., Zerbib M., Ulman A., Masarwi S., Kupervaser M., Levin Y., Shema E., David Y., Novershtern N., Hanna J. H. & Merbl Y. (2022). SUMOylation of linker histone H1 drives chromatin condensation and restriction of embryonic cell fate identity. Molecular Cell, Vol: 82, Page: 106-122.e9

Bykov Y. S., Flohr T., Boos F., Zung N., Herrmann J. M. & Schuldiner M. (2022). Widespread use of unconventional targeting signals in mitochondrial ribosome proteins. EMBO Journal, Vol: 41

Lobinska G., Pauzner A., Traulsen A., Pilpel Y. & Nowak M. (2022). Evolution of resistance to COVID-19 vaccination with dynamic social distancing. Nature Human Behaviour, Vol: 6, Page: 193-206

Fischer S., Buergi J., Gabay-Maskit S., Maier R., Mastalski T., Yifrach E., Obarska-Kosinska A., Rudowitz M., Erdmann R., Platta H. W., Wilmanns M., Schuldiner M., Zalckvar E., Oeljeklaus S., Drepper F. & Warscheid B. (2023). Phosphorylation of the receptor protein Pex5p modulates import of proteins into peroxisomes. Biological Chemistry, Vol: 404, Page: 135-155

Dunjic M., Jonas F., Yaakov G., More R., Mayshar Y., Rais Y., Barkai N. & Stelzer Y. (2023). Histone exchange sensors reveal variant specific dynamics in mouse embryonic stem cells. Nature Communications, Vol: 14

Uzonyi A., Dierks D., Nir R., Kwon O. S., Toth U., Barbosa I., Burel C., Brandis A., Rossmanith W., Le Hir H., Slobodin B. & Schwartz S. (2023). Exclusion of m6A from splice-site proximal regions by the exon junction complex dictates m6A topologies and mRNA stability. Molecular Cell, Vol: 83, Page: 237-251.e7

Rozman B., Fisher T. & Stern-Ginossar N. (2023). TranslationA tug of war during viral infection. Molecular Cell, Vol: 83, Page: 481-495

Gavish A., Chain B., Salame T. M., Antebi Y. E., Katz S., Reich-Zeliger S. & Friedman N. (2023). From pseudo to real time dynamics of T cell thymic differentiation. iScience, Vol: 26

Fenech E. J., Cohen N., Kupervaser M., Gazi Z. & Schuldiner M. (2023). A toolbox for systematic discovery of stable and transient protein interactors in baker's yeast. Molecular Systems Biology, Vol: 19

Ressler A. K., Sampaio G. L., Dugger S. A., Sapir T., Krizay D., Boland M. J., Reiner O. & Goldstein D. B. (2023). Evidence of shared transcriptomic dysregulation of HNRNPU-related disorder between human organoids and embryonic mice. iScience, Vol: 26

Starr A. L., Gokhman D. & Fraser H. B. (2023). Accounting for cis-regulatory constraint prioritizes genes likely to affect species-specific traits. GENOME BIOLOGY, Vol: 24

Bornstein B., Heinemann-Yerushalmi L., Krief S., Adler R., Dassa B., Leshkowitz D., Kim M., Bewick G., Banks R. W. & Zelzer E. (2023). Molecular characterization of the intact mouse muscle spindle using a multi-omics approach. eLife, Vol: 12

Schwartz M., Shnayder M., Nachshon A., Arazi T., Kitsberg Y., Levi Samia R., Lavi M., Kuint R., Tsabari R. & Stern-Ginossar N. (2023). Molecular characterization of human cytomegalovirus infection with single-cell transcriptomics. Nature Microbiology, Vol: 8, Page: 455-468

Nuta G. C., Gilad Y., Goldberg N., Meril S., Bahlsen M., Carvalho S., Kozer N., Barr H., Fridmann Sirkis Y., Hercík K., Břehová P., Nencka R., Bialik S., Eisenstein M. & Kimchi A. (2023). Identifying a selective inhibitor of autophagy that targets ATG12-ATG3 protein-protein interaction. Autophagy, Vol: 19, Page: 2372-2385

Barbieri G., Simon J., Lupusella C. R., Pereira F., Elia F., Meyer H., Schuldiner M., Hanes S. D., Nguyen D., Helms V. & Römisch K. (2023). Sec61 channel subunit Sbh1/Sec61β promotes ER translocation of proteins with suboptimal targeting sequences and is fine-tuned by phosphorylation. Journal of Biological Chemistry, Vol: 299

Amiad Pavlov D., Unnikannan C. P., Lorber D., Bajpai G., Olender T., Stoops E., Reuveny A., Safran S. & Volk T. (2023). The LINC Complex Inhibits Excessive Chromatin Repression. Cells (Basel, Switzerland), Vol: 12

Havkin-Solomon T., Fraticelli D., Bahat A., Hayat D., Reuven N., Shaul Y. & Dikstein R. (2023). Translation regulation of specific mRNAs by RPS26 C-terminal RNA-binding tail integrates energy metabolism and AMPK-mTOR signaling. Nucleic Acids Research, Vol: 51, Page: 4415-4428

Adler J., Oren R. & Shaul Y. (2023). Depleting the 19S proteasome regulatory PSMD1 subunit as a cancer therapy strategy. Cancer medicine (Malden, MA), Vol: 12, Page: 10781-10790

Markman S., Zada M., David E., Giladi A., Amit I. & Zelzer E. (2023). A single-cell census of mouse limb development identifies complex spatiotemporal dynamics of skeleton formation. Developmental Cell, Vol: 58, Page: 565-581.e4

Duncan-Lowey B., Tal N., Johnson A. G., Rawson S., Mayer M. L., Doron S., Millman A., Melamed S., Fedorenko T., Kacen A., Brandis A., Mehlman T., Amitai G., Sorek R. & Kranzusch P. J. (2023). Cryo-EM structure of the RADAR supramolecular anti-phage defense complex. Cell, Vol: 186, Page: 987-998

Hochhauser D., Millman A. & Sorek R. (2023). The defense island repertoire of the Escherichia coli pan-genome. PLoS Genetics, Vol: 19

Rousset F. & Sorek R. (2023). The evolutionary success of regulated cell death in bacterial immunity. Current Opinion in Microbiology, Vol: 74

Stokar-Avihail A., Fedorenko T., Hör J., Garb J., Leavitt A., Millman A., Shulman G., Wojtania N., Melamed S., Amitai G. & Sorek R. (2023). Discovery of phage determinants that confer sensitivity to bacterial immune systems. Cell, Vol: 186, Page: 1863-1876.e16

Jonas F., Carmi M., Krupkin B., Steinberger J., Brodsky S., Jana T. & Barkai N. (2023). The molecular grammar of protein disorder guiding genome-binding locations. Nucleic Acids Research, Vol: 51, Page: 4831-4844

Gershoni M., Braun T., Hauser R., Barda S., Lehavi O., Malcov M., Frumkin T., Kalma Y., Pietrokovski S., Arama E. & Kleiman S. E. (2023). A pathogenic variant in the uncharacterized RNF212B gene results in severe aneuploidy male infertility and repeated IVF failure. HGG advances, Vol: 4

Schwartz M. & Stern-Ginossar N. (2023). Rethinking human cytomegalovirus latency reservoir. Annals of the New York Academy of Sciences, Vol: 1524, Page: 30-36

Kahana A., Segev L. & Lancet D. (2023). Attractor dynamics drives self-reproduction in protobiological catalytic networks. Cell Reports Physical Science, Vol: 4

Strobelt R., Broennimann K., Adler J. & Shaul Y. (2023). SARS-CoV-2 Omicron Specific Mutations Affecting Infectivity, Fusogenicity, and Partial TMPRSS2-Independency. Viruses, Vol: 15

Kumar D. K., Jonas F., Jana T., Brodsky S., Carmi M. & Barkai N. (2023). Complementary strategies for directing in vivo transcription factor binding through DNA binding domains and intrinsically disordered regions. Molecular Cell, Vol: 83, Page: 1462-1473.e5

Havkin-Solomon T., Itzhaki E., Joffe N., Reuven N., Shaul Y. & Dikstein R. (2023). Selective translational control of cellular and viral mRNAs by RPS3 mRNA binding. Nucleic Acids Research, Vol: 51, Page: 4208-4222

Bornstein B., Watkins B., Passini F. S., Blecher R., Assaraf E., Sui X. M., Brumfeld V., Tsoory M., Kröger S. & Zelzer E. (2023). The mechanosensitive ion channel ASIC2 mediates both proprioceptive sensing and spinal alignment. Experimental Physiology, Vol: 109, Page: 135-147

Kshirsagar A., Doroshev S. M., Gorelik A., Olender T., Sapir T., Tsuboi D., Rosenhek-Goldian I., Malitsky S., Itkin M., Argoetti A., Mandel-Gutfreund Y., Cohen S. R., Hanna J. H., Ulitsky I., Kaibuchi K. & Reiner O. (2023). LIS1 RNA-binding orchestrates the mechanosensitive properties of embryonic stem cells in AGO2-dependent and independent ways. Nature Communications, Vol: 14

Cohen N., Aviram N. & Schuldiner M. (2023). A systematic proximity ligation approach to studying protein-substrate specificity identifies the substrate spectrum of the Ssh1 translocon. EMBO Journal, Vol: 42

Dasgupta S., Dayagi D. Y., Haimovich G., Wyler E., Olender T., Singer R. H., Landthaler M. & Gerst J. E. (2023). Global analysis of contact-dependent human-to-mouse intercellular mRNA and lncRNA transfer in cell culture. eLife, Vol: 12

Klumpe H. E., Garcia-Ojalvo J., Elowitz M. B. & Antebi Y. E. (2023). The computational capabilities of many-to-many protein interaction networks. Cell Systems, Vol: 14, Page: 430-446

Jansen R. L., van den Noort M., Krikken A. M., Bibi C., Böhm A., Schuldiner M., Zalckvar E. & van der Klei I. J. (2023). Novel targeting assay uncovers targeting information within peroxisomal ABC transporter Pxa1. Biochimica et Biophysica Acta - Molecular Cell Research, Vol: 1870

Gotkine M., Caraco Y., Lerner Y., Blotnick S., Wanounou M., Slutsky S. G., Chebath J., Kuperstein G., Estrin E., Ben-Hur T., Hasson A., Molakandov K., Sonnenfeld T., Stark Y., Revel A., Revel M. & Izrael M. (2023). Safety and efficacy of first-in-man intrathecal injection of human astrocytes (AstroRx®) in ALS patients: phase I/IIa clinical trial results. Journal of Translational Medicine, Vol: 21

Pasch T., Schröder A., Kattelmann S., Eisenstein M., Pietrokovski S., Kümmel D. & Mootz H. D. (2023). Structural and biochemical analysis of a novel atypically split intein reveals a conserved histidine specific to cysteine-less inteins. Chemical Science, Vol: 14, Page: 5204-5213

Adame-Arana O., Bajpai G., Lorber D., Volk T. & Safran S. (2023). Regulation of chromatin microphase separation by binding of protein complexes. eLife, Vol: 12

Wein T., Johnson A. G., Millman A., Lange K., Yirmiya E., Hadary R., Garb J., Steinruecke F., Hill A. B., Kranzusch P. J. & Sorek R. (2023). CARD-like domains mediate anti-phage defense in bacterial gasdermin systems. BioRxiv

Ensinck I., Maman A., Albihlal W. S., Lassandro M., Salzano G., Sideri T., Howell S. A., Calvani E., Patel H., Bushkin G., Ralser M., Snijders A. P., Skehel M., Casañal A., Schwartz S. & van Werven F. J. (2023). The yeast RNA methylation complex consists of conserved yet reconfigured components with m6A-dependent and independent roles. eLife, Vol: 12

Steinberger S., Adler J. & Shaul Y. (2023). Method of Monitoring 26S Proteasome in Cells Revealed the Crucial Role of PSMA3 C-Terminus in 26S Integrity. Biomolecules, Vol: 13

Sapir T. & Reiner O. (2023). HNRNPU's multi-tasking is essential for proper cortical development. BioEssays, Vol: 45

Magen I., Yacovzada N. S., Warren J. D., Heller C., Swift I., Bobeva Y., Malaspina A., Rohrer J. D., Fratta P. & Hornstein E. (2023). microRNA-based predictor for diagnosis of frontotemporal dementia. Neuropathology and Applied Neurobiology, Vol: 49

Ekal L., Alqahtani A. M., Schuldiner M., Zalckvar E., Hettema E. H. & Ayscough K. R. (2023). Spindle Position Checkpoint Kinase Kin4 Regulates Organelle Transport in Saccharomyces cerevisiae. Biomolecules, Vol: 13

Zhang Y., Zhang W., Zhao J., Ito T., Jin J., Aparicio A. O., Zhou J., Guichard V., Fang Y., Que J., Urban J. F., Hanna J. H., Ghosh S., Wu X., Ding L., Basu U. & Huang Y. (2023). m⁶A RNA modification regulates innate lymphoid cell responses in a lineage-specific manner. Nature Immunology, Vol: 24, Page: 1256-1264

Mark M., Klein O., Zhang Y., Das K., Elbaz A., Hazan R. N., Lichtenstein M., Lehming N., Schuldiner M. & Pines O. (2023). Systematic Approaches to Study Eclipsed Targeting of Proteins Uncover a New Family of Mitochondrial Proteins. Cells, Vol: 12

Lobinska G., Pilpel Y. & Ram Y. (2023). Phenotype switching of the mutation rate facilitates adaptive evolution. Genetics, Vol: 225

Lobinska G., Pilpel Y. & Nowak M. A. (2023). Evolutionary safety of lethal mutagenesis driven by antiviral treatment. PLoS Biology, Vol: 21

Oldak B., Wildschutz E., Bondarenko V., Comar M., Zhao C., Aguilera-Castrejon A., Tarazi S., Viukov S., Pham T. X. A., Ashouokhi S., Lokshtanov D., Roncato F., Ariel E., Rose M., Livnat N., Shani T., Joubran C., Cohen R., Addadi Y., Chemla M., Kedmi M., Keren-Shaul H., Pasque V., Petropoulos S., Lanner F., Novershtern N. & Hanna J. H. (2023). Complete human day 14 post-implantation embryo models from naive ES cells. Nature, Vol: 622, Page: 562-573

Shoer S., Shilo S., Godneva A., Ben-Yacov O., Rein M., Wolf B. C., Lotan-Pompan M., Bar N., Weiss E. I., Houri-Haddad Y., Pilpel Y., Weinberger A. & Segal E. (2023). Impact of dietary interventions on pre-diabetic oral and gut microbiome, metabolites and cytokines. Nature Communications, Vol: 14

Vitale I., Pietrocola F., Guilbaud E., Aaronson S. A., Abrams J. M., Adam D., Agostini M., Agostinis P., Alnemri E. S., Altucci L., Amelio I., Andrews D. W., Aqeilan R. I., Arama E., Baehrecke E. H., Balachandran S., Bano D., Barlev N. A., Bartek J., Bazan N. G., Becker C., Bernassola F., Bertrand M. J., Bianchi M. E., Blagosklonny M. V., Blander J. M., Blandino G., Blomgren K., Borner C., Bortner C. D., Bove P., Boya P., Brenner C., Broz P., Brunner T., Damgaard R. B., Calin G. A., Campanella M., Candi E., Carbone M., Carmona-Gutierrez D., Cecconi F., Chan F. K., Chen G. Q., Chen Q., Chen Y. H., Cheng E. H., Chipuk J. E., Cidlowski J. A., Ciechanover A., Ciliberto G., Conrad M., Cubillos-Ruiz J. R., Czabotar P. E., DAngiolella V., Daugaard M., Dawson T. M., Dawson V. L., De Maria R., De Strooper B., Debatin K. M., Deberardinis R. J., Degterev A., Del Sal G., Deshmukh M., Di Virgilio F., Diederich M., Dixon S. J., Dynlacht B. D., El-Deiry W. S., Elrod J. W., Engeland K., Fimia G. M., Galassi C., Ganini C., Garcia-Saez A. J., Garg A. D., Garrido C., Gavathiotis E., Gerlic M., Ghosh S., Green D. R., Greene L. A., Gronemeyer H., Häcker G., Hajnóczky G., Hardwick J. M., Haupt Y., He S., Heery D. M., Hengartner M. O., Hetz C., Hildeman D. A., Ichijo H., Inoue S., Jäättelä M., Janic A., Joseph B., Jost P. J., Kanneganti T. D., Karin M., Kashkar H., Kaufmann T., Kelly G. L., Kepp O., Kimchi A., Kitsis R. N., Klionsky D. J., Kluck R., Krysko D. V., Kulms D., Kumar S., Lavandero S., Lavrik I. N., Lemasters J. J., Liccardi G., Linkermann A., Lipton S. A., Lockshin R. A., López-Otín C., Luedde T., MacFarlane M., Madeo F., Malorni W., Manic G., Mantovani R., Marchi S., Marine J. C., Martin S. J., Martinou J. C., Mastroberardino P. G., Medema J. P., Mehlen P., Meier P., Melino G., Melino S., Miao E. A., Moll U. M., Muñoz-Pinedo C., Murphy D. J., Niklison-Chirou M. V., Novelli F., Núñez G., Oberst A., Ofengeim D., Opferman J. T., Oren M., Pagano M., Panaretakis T., Pasparakis M., Penninger J. M., Pentimalli F., Pereira D. M., Pervaiz S., Peter M. E., Pinton P., Porta G., Prehn J. H., Puthalakath H., Rabinovich G. A., Rajalingam K., Ravichandran K. S., Rehm M., Ricci J. E., Rizzuto R., Robinson N., Rodrigues C. M., Rotblat B., Rothlin C. V., Rubinsztein D. C., Rudel T., Rufini A., Ryan K. M., Sarosiek K. A., Sawa A., Sayan E., Schroder K., Scorrano L., Sesti F., Shao F., Shi Y., Sica G. S., Silke J., Simon H. U., Sistigu A., Stephanou A., Stockwell B. R., Strapazzon F., Strasser A., Sun L., Sun E., Sun Q., Szabadkai G., Tait S. W., Tang D., Tavernarakis N., Troy C. M., Turk B., Urbano N., Vandenabeele P., Vanden Berghe T., Vander Heiden M. G., Vanderluit J. L., Verkhratsky A., Villunger A., von Karstedt S., Voss A. K., Vousden K. H., Vucic D., Vuri D., Wagner E. F., Walczak H., Wallach D., Wang R., Wang Y., Weber A., Wood W., Yamazaki T., Yang H. T., Zakeri Z., Zawacka-Pankau J. E., Zhang L., Zhang H., Zhivotovsky B., Zhou W., Piacentini M., Kroemer G. & Galluzzi L. (2023). Apoptotic cell death in diseaseCurrent understanding of the NCCD 2023. Cell Death and Differentiation, Vol: 30, Page: 1097-1154

Danino Y. M., Molitor L., Rosenbaum-Cohen T., Kaiser S., Cohen Y., Porat Z., Marmor-Kollet H., Katina C., Savidor A., Rotkopf R., Ben-Isaac E., Golani O., Levin Y., Monchaud D., Hickson I. D. & Hornstein E. (2023). BLM helicase protein negatively regulates stress granule formation through unwinding RNA G-quadruplex structures. Nucleic Acids Research, Vol: 51, Page: 9369-9384

Biton T., Scher N., Carmon S., Elbaz-Alon Y., Schejter E. D., Shilo B. & Avinoam O. (2023). Fusion pore dynamics of large secretory vesicles define a distinct mechanism of exocytosis. Journal of Cell Biology, Vol: 222

Jonas F., Vidavski M., Benuck E., Barkai N. & Yaakov G. (2023). Nucleosome retention by histone chaperones and remodelers occludes pervasive DNA-protein binding. Nucleic Acids Research, Vol: 51, Page: 8496-8513

Rousset F., Yirmiya E., Nesher S., Brandis A., Mehlman T., Itkin M., Malitsky S., Millman A., Melamed S. & Sorek R. (2023). A conserved family of immune effectors cleaves cellular ATP upon viral infection. Cell, Vol: 186, Page: 3619-3631.e13

De Vito F., Balletta S., Caioli S., Musella A., Guadalupi L., Vanni V., Fresegna D., Bassi M. S., Gilio L., Sanna K., Gentile A., Bruno A., Dolcetti E., Buttari F., Pavone L., Furlan R., Finardi A., Perlas E., Hornstein E., Centonze D. & Mandolesi G. (2023). MiR-142-3p is a Critical Modulator of TNF-mediated Neuronal Toxicity in Multiple Sclerosis. Current Neuropharmacology, Vol: 21, Page: 2567-2582

Brener A., Lorber D., Reuveny A., Toledano H., Porat-Kuperstein L., Lebenthal Y., Weizman E., Olender T. & Volk T. (2023). Sedentary Behavior Impacts on the Epigenome and Transcriptome: Lessons from Muscle Inactivation in Drosophila Larvae. Cells, Vol: 12

Hamashima K., Wong K. W., Sam T. W., Teo J. H. J., Taneja R., Le M. T., Li Q. J., Hanna J. H., Li H. & Loh Y. H. (2023). Single-nucleus multiomic mapping of m⁶A methylomes and transcriptomes in native populations of cells with sn-m6A-CT. Molecular Cell, Vol: 83, Page: 3205-3216.e5

Anuj A., Reuven N., Roberts S. G. & Elson A. (2023). BASP1 down-regulates RANKL-induced osteoclastogenesis. Experimental Cell Research, Vol: 431

Lupo O., Kumar D. K., Livne R., Chappleboim M., Levy I. & Barkai N. (2023). The architecture of binding cooperativity between densely bound transcription factors. Cell Systems, Vol: 14, Page: 732-745.e5

Kshirsagar A. & Reiner O. (2023). The Emerging Roles of LIS1 Biomechanics in Cellular and Cortical Homeostasis. , Page: 365-396

Strobelt R., Adler J. & Shaul Y. (2023). The Transmembrane Protease Serine 2 (TMPRSS2) Non-Protease Domains Regulating Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Spike-Mediated Virus Entry. Viruses, Vol: 15

Ashkenasy G., Kauffman S., Lancet D., Otto S., Ruiz-Mirazo K., Semenov S. & Xavier J. (2023). Collectively autocatalytic sets. Cell Reports Physical Science, Vol: 4

Szoke T., Goldberger O., Albocher-Kedem N., Barsheshet M., Dezorella N., Nussbaum-Shochat A., Wiener R., Schuldiner M. & Amster-Choder O. (2023). Regulation of major bacterial survival strategies by transcripts sequestration in a membraneless organelle. Cell Reports, Vol: 42

Rajan K. S., Madmoni H., Bashan A., Taoka M., Aryal S., Nobe Y., Doniger T., Galili Kostin B., Blumberg A., Cohen-Chalamish S., Schwartz S., Rivalta A., Zimmerman E., Unger R., Isobe T., Yonath A. & Michaeli S. (2023). A single pseudouridine on rRNA regulates ribosome structure and function in the mammalian parasite Trypanosoma brucei. Nature Communications, Vol: 14

Tsitsou-Kampeli A., Suzzi S., Kenigsbuch M., Satomi A., Strobelt R., Singer O., Feldmesser E., Purnapatre M., Colaiuta S. P., David E., Cahalon L., Hahn O., Wyss-Coray T., Shaul Y., Amit I. & Schwartz M. (2023). Cholesterol 24-hydroxylase at the choroid plexus contributes to brain immune homeostasis. Cell Reports Medicine, Vol: 4

Morillo L., Paternina T., Alasseur Q., Genovesio A., Schwartz S. & Le Hir H. (2023). Comprehensive mapping of exon junction complex binding sites reveals universal EJC deposition in Drosophila. BMC Biology, Vol: 21

Kamalesh K., Segal D., Avinoam O., Schejter E. D. & Shilo B. (2023). Structured RhoGEF recruitment drives myosin II organization on large exocytotic vesicles. BioRxiv

Zambrano-Mila M. S., Witzenberger M., Rosenwasser Z., Uzonyi A., Nir R., Ben-Aroya S., Levanon E. Y. & Schwartz S. (2023). Dissecting the basis for differential substrate specificity of ADAR1 and ADAR2. Nature Communications, Vol: 14

Yaniv R. & Lancet D. (2023). Lifes Emergence by Protocellular Mutually Catalytic Networks. , Page: 239-263

Thawakar O., Anwer R. M., Laaksonen J., Reiner O., Shah M. & Khan F. S. (2023). 3D Mitochondria Instance Segmentation with Spatio-Temporal Transformers. , Page: 613-623

Abdul Kareem D. N., Fiaz M., Novershtern N., Hanna J. & Cholakkal H. (2023). Improving 3D Medical Image Segmentation at Boundary Regions using Local Self-attention and Global Volume Mixing. IEEE Transactions on Artificial Intelligence, Vol: 5, Page: 1-12

Omar M. I., MacLennan S., Ribal M. J., Roobol M. J., Dimitropoulos K., van den Broeck T., MacLennan S. J., Axelsson S. E., Gandaglia G., Willemse P., Mastris K., Ransohoff J. B., Devecseri Z., Abbott T., De Meulder B., Bjartell A., Asiimwe A., N'Dow J., Smith E., Lancet D. & Bernstein G. (2023). Unanswered questions in prostate cancer - findings of an international multi-stakeholder consensus by the PIONEER consortium. Nature Reviews Urology, Vol: 20, Page: 494-501

Siltari A., Lönnerbro R., Pang K., Shiranov K., Asiimwe A., Evans-Axelsson S., Franks B., Kiran A., Murtola T. J., Schalken J., Steinbeisser C., Bjartell A., Auvinen A., N'Dow J., Smith E. J., Shepherd R., Ribal M., Mottet N., Moris L. & Lancet D. (2023). How Well do Polygenic Risk Scores Identify Men at High Risk for Prostate Cancer? Systematic Review and Meta-Analysis. Clinical Genitourinary Cancer, Vol: 21, Page: 316.e1-316.e11

Ji W., Hachmo O., Barkai N. & Amir A. (2023). Design principles of transcription factors with intrinsically disordered regions. arXiv.org

Reuven N., Barnea-Zohar M. & Elson A. (2024). Osteoclast Methods in Protein Phosphatase Research. , Page: 57-79

Mindel V., Brodsky S., Cohen A., Manadre W., Jonas F., Carmi M. & Barkai N. (2024). Intrinsically disordered regions of the Msn2 transcription factor encode multiple functions using interwoven sequence grammars. Nucleic Acids Research, Vol: 52, Page: 2260-2272

Meril S., Bahlsen M., Eisenstein M., Savidor A., Levin Y., Bialik S., Pietrokovski S. & Kimchi A. (2024). Loss-of-function cancer-linked mutations in the EIF4G2 non-canonical translation initiation factor. Life Science Alliance, Vol: 7

Antine S. P., Johnson A. G., Mooney S. E., Leavitt A., Mayer M. L., Yirmiya E., Amitai G., Sorek R. & Kranzusch P. J. (2024). Structural basis of Gabija anti-phage defence and viral immune evasion. Nature, Vol: 625, Page: 360-365

Yirmiya E., Leavitt A., Lu A., Ragucci A. E., Avraham C., Osterman I., Garb J., Antine S. P., Mooney S. E., Hobbs S. J., Kranzusch P. J., Amitai G. & Sorek R. (2024). Phages overcome bacterial immunity via diverse anti-defence proteins. Nature, Vol: 625, Page: 352-359

Raghav Y., Dilliott A. A., Petrozziello T., Kim S. E., Berry J. D., Cudkowicz M. E., Vakili K., Phatnani H., Kwan J., Sareen D., Broach J. R., Simmons Z., Arcila-Londono X., Lee E. B., Van Deerlin V. M., Shneider N. A., Fraenkel E., Ostrow L. W., Baas F. & Hornstein E. (2024). Identification of gene fusions associated with amyotrophic lateral sclerosis. Muscle and Nerve

Shachar R., Dierks D., Garcia-Campos M. A., Uzonyi A., Toth U., Rossmanith W. & Schwartz S. (2024). Dissecting the sequence and structural determinants guiding m6A deposition and evolution via inter- and intra-species hybrids. Genome Biology, Vol: 25

Tamulaitiene G., Sabonis D., Sasnauskas G., Ruksenaite A., Silanskas A., Avraham C., Ofir G., Sorek R., Zaremba M. & Siksnys V. (2024). Activation of Thoeris antiviral system via SIR2 effector filament assembly. Nature, Vol: 627, Page: 431-436

Bittner E., Stehlik T., Lam J., Dimitrov L., Heimerl T., Schöck I., Harberding J., Dornes A., Heymons N., Bange G., Schuldiner M., Zalckvar E., Bölker M., Schekman R. & Freitag J. (2024). Proteins that carry dual targeting signals can act as tethers between peroxisomes and partner organelles. PLoS Biology, Vol: 22

Meril S., Muhlbauer Avni M., Lior C., Bahlsen M., Olender T., Savidor A., Krausz J., Belhanes Peled H., Birisi H., David N., Bialik S., Scherz-Shouval R., Ben David Y. & Kimchi A. (2024). Loss of EIF4G2 mediates aggressiveness in distinct human endometrial cancer subpopulations with poor survival outcome in patients. Oncogene, Vol: 43, Page: 1098-1112

Russell B., Beyer K., Lawlor A., Roobol M. J., Venderbos L. D., Remmers S., Briers E., MacLennan S. J., MacLennan S., Omar M. I., Van Hemelrijck M., Smith E., N'Dow J., Plass K., Ribal M., Mottet N., Shepherd R., Abbott T., Mastris K. & Lancet D. (2024). Survivorship Data in Prostate Cancer: Where Are We and Where Do We Need To Be?. European Urology Open Science, Vol: 59, Page: 27-29

Hurieva B., Kumar D. K., Morag R., Lupo O., Carmi M., Barkai N. & Jonas F. (2024). Disordered sequences of transcription factors regulate genomic binding by integrating diverse sequence grammars and interaction types. Nucleic Acids Research, Vol: 52, Page: 8763-8777

Gubas A., Attridge E., Jefferies H. B., Nishimura T., Razi M., Kunzelmann S., Gilad Y., Mercer T. J., Wilson M. M., Kimchi A. & Tooze S. A. (2024). WIPI2b recruitment to phagophores and ATG16L1 binding are regulated by ULK1 phosphorylation. EMBO Reports, Vol: 25, Page: 3789-3811

Deis R., Lerer-Goldshtein T., Baiko O., Eyal Z., Brenman-Begin D., Goldsmith M., Kaufmann S., Heinig U., Dong Y., Lushchekina S., Varsano N., Olender T., Kupervaser M., Porat Z., Levin-Zaidman S., Pinkas I., Mateus R. & Gur D. (2024). Genetic control over biogenic crystal morphogenesis in zebrafish. Nature Chemical Biology

Mookherjee A., Mitra M., Sason G., Jose P. A., Martinenko M., Pietrokovski S. & Jurkevitch E. (2024). Flagellar stator genes control a trophic shift from obligate to facultative predation and biofilm formation in a bacterial predator. mBio, Vol: 15

Martinez Arias A., Rivron N., Moris N., Tam P., Alev C., Fu J., Hadjantonakis A. K., Hanna J. H., Minchiotti G., Pourquie O., Sheng G., Solnica Krezel L., Veenvliet J. V. & Warmflash A. (2024). Criteria for the standardization of stem-cell-based embryo models. Nature Cell Biology

Elhussein A., Baymuradov U., Gregersen P., Nicholson K., Lindblad-Toh K., Rozenblatt-Rosen O., Van Keuren-Jensen K., Sattler R., Lerner Y., Altschuler S., Wu L., Menon V., McMillan C., Ravits J., Drory V., Broce I., Harris B., Bin Zhang Z., Smith C. & Hornstein E. (2024). A framework for sharing of clinical and genetic data for precision medicine applications. Nature Medicine

Osterman I. & Sorek R. (2024). Phage genome engineering with retrons. Nature biotechnology

Lawlor A., Beyer K., Russell B., Steinbeisser C., Bjartell A., De Meulder B., Omar M. I., Hulsen T., Butler J., NDow J., Rivas J. G., Gandaglia G., Nicoletti R., Sakalis V., Smith E. J., Maass M., Zong J., Fullwood L., Abbott T. & Lancet D. (2024). PIONEER big data platform for prostate cancer: lessons for advancing future real-world evidence research. Nature Reviews Urology

Benatar M., Macklin E. A., Malaspina A., Rogers M. L., Hornstein E., Lombardi V., Renfrey D., Shepheard S., Magen I., Cohen Y., Granit V., Statland J. M., Heckmann J. M., Rademakers R., McHutchison C. A., Petrucelli L., McMillan C. T., Wuu J., Elman L. & Ravits J. (2024). Prognostic clinical and biological markers for amyotrophic lateral sclerosis disease progression: validation and implications for clinical trial design and analysis. EBioMedicine, Vol: 108

Skach K., Boserle J., Břehová P., Chaloupecká E., Nencka R., Skach K., Nuta G. C., Bialik S., Kimchi A., Carvalho S., Kozer N. & Barr H. (2024). Structureactivity relationship study of small-molecule inhibitor of Atg12-Atg3 proteinprotein interaction. Bioorganic and Medicinal Chemistry Letters, Vol: 112

Yilmaz A., Gurhan G. & Hanna J. H. (2024). Putting together pieces of the LIN28A pathway puzzle. Nature Structural and Molecular Biology, Vol: 31, Page: 1313-1314

Bykov Y. S. & Schuldiner M. (2024). Analysis of mitochondrial biogenesis and protein localization by genetic screens and automated imaging. , Page: 97-123

Gera T., Kumar D. K., Yaakov G., Barkai N. & Jonas F. (2024). ChEC-Seq: A Comprehensive Guide for Scalable and Cost-Efficient Genome-Wide Profiling in Saccharomyces cerevisiae. , Vol: 2846, Page: 263-283

Hör J., Wolf S. G. & Sorek R. (2024). Bacteria conjugate ubiquitin-like proteins to interfere with phage assembly. Nature, Vol: 631, Page: 850-856

Kamalesh K., Segal D., Avinoam O., Schejter E. D. & Shilo B. Z. (2024). Structured RhoGEF recruitment drives myosin II organization on large exocytic vesicles. Journal of Cell Science, Vol: 137

Ben-Hur S., Sernik S., Afar S., Kolpakova A., Politi Y., Gal L., Florentin A., Golani O., Sivan E., Dezorella N., Morgenstern D., Pietrokovski S., Schejter E., Yacobi-Sharon K. & Arama E. (2024). Egg multivesicular bodies elicit an LC3-associated phagocytosis-like pathway to degrade paternal mitochondria after fertilization. Nature Communications, Vol: 15

Aggarwal S., Rosenblum C., Gould M., Ziman S., Barshir R., Zelig O., Guan-Golan Y., Iny-Stein T., Safran M., Pietrokovski S. & Lancet D. (2024). Expanding and Enriching the LncRNA GeneDisease Landscape Using the GeneCaRNA Database. Biomedicines, Vol: 12

Preminger N. & Schuldiner M. (2024). Beyond fission and fusionDiving into the mysteries of mitochondrial shape. PLoS Biology, Vol: 22

Finkel Y., Nachshon A., Aharon E., Arazi T., Simonovsky E., Dobešová M., Saud Z., Gluck A., Fisher T., Stanton R. J., Schwartz M. & Stern-Ginossar N. (2024). A virally encoded high-resolution screen of cytomegalovirus dependencies. Nature, Vol: 630, Page: 712-719

Gur D., Moore A. S., Deis R., Song P., Wu X., Pinkas I., Deo C., Iyer N., Hess H. F., Hammer J. A. & Lippincott-Schwartz J. (2024). The physical and cellular mechanism of structural color change in zebrafish. Proceedings of the National Academy of Sciences, Vol: 121

Mayer C., Lancet D. & Markovitch O. (2024). The GARD Prebiotic Reproduction Model Described in Order and Complexity. Life, Vol: 14

Garcia-Campos M. A. & Schwartz S. (2024). txtools: an R package facilitating analysis of RNA modifications, structures, and interactions. Nucleic Acids Research, Vol: 52

Rajan K. S., Aryal S., Hiregange D. G., Bashan A., Madmoni H., Olami M., Doniger T., Cohen-Chalamish S., Pescher P., Taoka M., Nobe Y., Fedorenko A., Bose T., Zimermann E., Prina E., Aharon-Hefetz N., Pilpel Y., Isobe T., Unger R., Späth G. F., Yonath A. & Michaeli S. (2024). Structural and mechanistic insights into the function of Leishmania ribosome lacking a single pseudouridine modification. Cell Reports, Vol: 43

Alsayyah C., Singh M. K., Morcillo-Parra M. A., Cavellini L., Shai N., Schmitt C., Schuldiner M., Zalckvar E., Mallet A., Belgareh-Touzé N., Zimmer C. & Cohen M. M. (2024). Mitofusin-mediated contacts between mitochondria and peroxisomes regulate mitochondrial fusion. PLoS Biology, Vol: 22

Georgeson J. & Schwartz S. (2024). No evidence for ac4C within human mRNA upon data reassessment. Molecular Cell, Vol: 84, Page: 1601-1610.e2

Garb J., Amitai G., Lu A., Ofir G., Brandis A., Mehlman T., Kranzusch P. J. & Sorek R. (2024). The SARM1 TIR domain produces glycocyclic ADPR molecules as minor products. PLoS ONE, Vol: 19

Dermentzaki G., Furlan M., Tanaka I., Leonardi T., Rinchetti P., Passos P. M., Bastos A., Ayala Y. M., Hanna J. H., Przedborski S., Bonanomi D., Pelizzola M. & Lotti F. (2024). Depletion of Mettl3 in cholinergic neurons causes adult-onset neuromuscular degeneration. Cell Reports, Vol: 43

Chappleboim M., Naveh-Tassa S., Carmi M., Levy Y. & Barkai N. (2024). Ordered and disordered regions of the Origin Recognition Complex direct differential in vivo binding at distinct motif sequences. Nucleic Acids Research, Vol: 52, Page: 5720-5731

Kohanovski I., Pontz M., Zande P. V., Selmecki A., Dahan O., Pilpel Y., Yona A. H. & Ram Y. (2024). Aneuploidy Can Be an Evolutionary Diversion on the Path to Adaptation. Molecular Biology and Evolution, Vol: 41

Laporte D., Massoni-Laporte A., Lefranc C., Dompierre J., Mauboules D., Nsamba E. T., Royou A., Gal L., Schuldiner M., Gupta M. L. & Sagot I. (2024). A stable microtubule bundle formed through an orchestrated multistep process controls quiescence exit. eLife, Vol: 12

Jain S., Bakolitsa C., Brenner S. E., Radivojac P., Moult J., Repo S., Hoskins R. A., Andreoletti G., Barsky D., Chellapan A., Chu H., Dabbiru N., Kollipara N. K., Ly M., Neumann A. J., Pal L. R., Odell E., Fishilevich S., Lancet D. & Yosef N. (2024). CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methods. Genome Biology, Vol: 25

Song L., Golman M., Abraham A. C., Zelzer E. & Thomopoulos S. (2024). A role for TGFβ signaling in Gli1+ tendon and enthesis cells. FASEB Journal, Vol: 38

Lobinska G., Tretyachenko V., Dahan O., Nowak M. A. & Pilpel Y. (2024). The evolutionary safety of mutagenic drugs should be assessed before drug approval. PLoS Biology, Vol: 22

Reinhard J., Starke L., Klose C., Haberkant P., Hammarén H., Stein F., Klein O., Berhorst C., Stumpf H., Sáenz J. P., Hub J., Schuldiner M. & Ernst R. (2024). MemPrep, a new technology for isolating organellar membranes provides fingerprints of lipid bilayer stress. EMBO Journal, Vol: 43, Page: 1653-1685

Xue X., Kim Y. S., Ponce-Arias A. I., OLaughlin R., Yan R. Z., Kobayashi N., Tshuva R. Y., Tsai Y. H., Sun S., Zheng Y., Liu Y., Wong F. C., Surani A., Spence J. R., Song H., Ming G. L., Reiner O. & Fu J. (2024). A patterned human neural tube model using microfluidic gradients. Nature, Vol: 628, Page: 391-399

Sekeresova Kralova J., Donic C., Dassa B., Livyatan I., Jansen P. M., Ben-Dor S., Fidel L., Trzebanski S., Narunsky-Haziza L., Asraf O., Brenner O., Dafni H., Jona G., Boura-Halfon S., Stettner N., Segal E., Brunke S., Pilpel Y., Straussman R., Zeevi D., Bacher P., Hube B., Shlezinger N. & Jung S. (2024). Competitive fungal commensalism mitigates candidiasis pathology. Journal of Experimental Medicine, Vol: 221

Witzenberger M. & Schwartz S. (2024). Directing RNA-modifying machineries towards endogenous RNAs: opportunities and challenges. Trends in Genetics, Vol: 40, Page: 313-325

Hadas R., Rubinstein H., Mittnenzweig M., Mayshar Y., Ben-Yair R., Cheng S., Aguilera-Castrejon A., Reines N., Orenbuch A., Lifshitz A., Chen D., Elowitz M. B., Zernicka-Goetz M., Hanna J. H., Tanay A. & Stelzer Y. (2024). Temporal BMP4 effects on mouse embryonic and extraembryonic development. Nature, Vol: 634, Page: 652-661

Pottinger T. D., Motelow J. E., Povysil G., Moreno C. A., Ren Z., Phatnani H., Nath A., Dubnau J., Patsopoulos N. A., Hammell M. G., Heiman-Patterson T., MacGowan D. J., Hornstein E., Pal S., Parrott S., Chandran S., Miller T. M., Dardiotis E., Finkbeiner S. & Thompson L. M. (2024). Rare variant analyses validate known ALS genes in a multi-ethnic population and identifies ANTXR2 as a candidate in PLS. BMC Genomics, Vol: 25

Osterman I., Samra H., Rousset F., Loseva E., Itkin M., Malitsky S., Yirmiya E., Millman A. & Sorek R. (2024). Phages reconstitute NAD⁺ to counter bacterial immunity. Nature, Vol: 634, Page: 1160-1167

Eyal Z., Gorelick-Ashkenazi A., Deis R., Barzilay Y., Broder Y., Kellum A. P., Varsano N., Hartstein M., Sorrentino A., Kaplan-Ashiri I., Rechav K., Metzler R., Houben L., Kronik L., Rez P. & Gur D. (2024). Controlled pH Alteration Enables Guanine Accumulation and Drives Crystallization within Iridosomes. BioRxiv

Osterman I. & Sorek R. (2024). Tricking phages with a reverse move: An antiviral gene is absent in DNA but expressed by rolling circle reverse transcription.. Science (New York, N.Y.), Vol: 386, Page: 25-26

Barnea-Zohar M., Stein M., Reuven N., Winograd-Katz S., Lee S., Addadi Y., Arman E., Tuckermann J., Geiger B. & Elson A. (2024). SNX10 regulates osteoclastogenic cell fusion and osteoclast size in mice. Journal of Bone and Mineral Research, Vol: 39, Page: 1503-1517

Dierks D. & Schwartz S. (2024). Timing is everything: When is m6A deposited?. Molecular Cell, Vol: 84, Page: 3572-3573

Riutin M., Erez P., Adler J., Biran A., Myers N. & Shaul Y. (2024). Investigating the p21 Ubiquitin-Independent Degron Reveals a Dual Degron Module Regulating p21 Degradation and Function. Cells, Vol: 13

Shoer S., Reicher L., Zhao C., Pollard K. S., Pilpel Y. & Segal E. (2024). Pangenomes of human gut microbiota uncover links between genetic diversity and stress response. Cell Host and Microbe, Vol: 32, Page: 1744-1757.e2

Rubin S., Agrawal A., Seewald A., Lian M. J., Gottdenker O., Villoutreix P., Baule A., Stern T. & Zelzer E. (2024). Limited column formation in the embryonic growth plate implies divergent growth mechanisms during pre- and postnatal bone development. eLife, Vol: 13

Pallavicini G., Moccia A., Iegiani G., Parolisi R., Peirent E. R., Berto G. E., Lorenzati M., Tshuva R. Y., Ferraro A., Balzac F., Turco E., Salvi S. U., Myklebust H. F., Wang S., Eisenberg J., Chitale M., Girgla N. S., Boda E., Reiner O., Buffo A., Di Cunto F. & Bielas S. L. (2024). Modeling primary microcephaly with human brain organoids reveals fundamental roles of CIT kinase activity. Journal of Clinical Investigation, Vol: 134

Jana Lang T., Brodsky S., Manadre W., Vidavski M., Valinsky G., Mindel V., Ilan G., Carmi M., Jonas F. & Barkai N. (2024). Massively parallel binding assay (MPBA) reveals limited transcription factor binding cooperativity, challenging models of specificity. Nucleic Acids Research, Vol: 52, Page: 12227-12243

Mindel V., Brodsky S., Yung H., Manadre W. & Barkai N. (2024). Revisiting the model for coactivator recruitment: Med15 can select its target sites independent of promoter-bound transcription factors. Nucleic Acids Research, Vol: 52, Page: 12093-12111

Ma Y., Eizenberg-Magar I. & Antebi Y. (2024). EasyFlow: An open-source, user-friendly cytometry analyzer with graphic user interface (GUI). PLoS ONE, Vol: 19

Béchon N., Tal N., Stokar-Avihail A., Savidor A., Kupervaser M., Melamed S., Amitai G. & Sorek R. (2024). Diversification of molecular pattern recognition in bacterial NLR-like proteins. Nature Communications, Vol: 15

Zigdon I., Carmi M., Brodsky S., Rosenwaser Z., Barkai N. & Jonas F. (2024). Beyond RNA-binding domains: determinants of proteinRNA binding. RNA, Vol: 30, Page: 1620-1633

Ricouvier J., Mostov P., Shabtai O., Vonshak O., Tayar A., Karzbrun E., Khakimzhan A., Noireaux V., Daube S. S. & Bar-Ziv R. (2024). Large-scale-integration and collective oscillations of 2D artificial cells. Nature Communications, Vol: 15