Publications

2023

2022

2022

B. Slobodin, U. Sehrawat, A. Lev, D. Hayat, B. Zuckerman, D. Fraticelli, A. Ogran, A. Ben-Shmuel, E. Bar-David, H. Levy, I. Ulitsky and R. Dikstein, Aug 2022, Nucleic Acids Research. 14, 50, p. 8080-8092

2022

L. Bernard, A. Dubois, V. Heurtier, V. Fischer, I. Gonzalez, A. Chervova, A. Tachtsidi, N. Gil, N. Owens, S. Vanormael-Pournin, J.C.R. Silva, I. Ulitsky, M. Cohen-Tannoudji and P. Navarro, Jul 2022, Nucleic Acids Rearch. 13, 50, p. 7367-7379

2022

J.P. Unfried and I. Ulitsky, May 2022, Nature Cell Biology. 5, 24, p. 608-615

2022
2022

N. Nissani and I. Ulitsky, Apr 2022, Molecular Systems Biology. 4, 18, p. e10682

2022

M. Royer, B. Pai, R. Menon, A. Bludau, K. Gryksa, R. Ben-Tov Perry, I. Ulitsky, G. Meister and I. Neumann, Mar 2022, Molecular Psychiatry.

2022

N. B. Nataraj, A. Noronha, J.S. Lee, S. Ghosh, H. R. M. Raju, A. Sekar, B. Zuckerman, M. Lindzen, E. Tarcitano, S. Srivastava, M. Selitrennik, I. Livneh, D. Drago-Garcia, O. Rueda, C. Caldas, S. Lev, T. Geiger, A. Ciechanover, I. Ulitsky, R. Seger, E. Ruppin and Y. Yarden, Feb 2022, Cell Reports. 8, 38, p. 110418

2022

C.J. Ross and I. Ulitsky, Jan 2022, WIREs RNA. p. e1708

2021

2021

R. Ben-Tov Perry and I. Ulitsky, Aug 2021, Science. 373, 6555, p. 623-624

2021

Y. Finkel, A. Gluck, R. Winkler, A. Nachshon, R. Winkler, T. Fisher, B. Rozman, O. Mizrahi, Y. Lubelsky, B. Zuckerman, B. Slobodin, Y. Yahalom-Ronen, H. Tamir, I. Ulitsky, T. Israely, N. Paran, M. Schwartz and N. Stern-Ginossar, Jun 2021, Nature. 594, 7862, p. 240-245

2020

2020

H. Hezroni, R. Ben-Tov Perry, N. Gil, N. Degani and I. Ulitsky, Sep 2020, EMBO Reports. 11, 21, p. e51264,

2020

J.A. Ramilowski, C.W. Yip, S. Agrawal, J.C. Chang, Y. Ciani, I.V. Kulakovskiy, M. Mendez, J.L.C. Ooi, J.F. Ouyang, N. Parkinson, A. Petri, L. Roos, J. Severin, K. Yasuzawa, I. Abugessaisa, A. Akalin, I.V. Antonov, E. Arner, A. Bonetti, H. Bono, B. Borsari, F. Brombacher, C.J.F. Cameron, C. Vittorio Cannistraci, R. Cardenas, M. Cardon, H. Chang, J. Dostie, L. Ducoli, A. Favorov, A. Fort, D. Garrido, N. Gil, J. Gimenez, R. Guler, L. Handoko, J. Harshbarger, A. Hasegawa, Y. Hasegawa, K. Hashimoto, N. Hayatsu, P. Heutink, T. Hirose, E.L. Imada, M. Itoh, B. Kaczkowski, A. Kanhere, E. Kawabata, H. Kawaji, T. Kawashima, S.T. Kelly, M. Kojima, N. Kondo, H. Koseki, T. Kouno, A. Kratz, M. Kurowska-Stolarska, A. Tae Jun Kwon, J. Leek, A. Lennartsson, M. Lizio, F. López-Redondo, J. Luginbühl, S. Maeda, V.J. Makeev, L. Marchionni, Y.A. Medvedeva, A. Minoda, F. Müller, M. Muñoz-Aguirre, M. Murata, H. Nishiyori, K.R. Nitta, S. Noguchi, Y. Noro, R. Nurtdinov, Y. Okazaki, V. Orlando, D. Paquette, C.J.C. Parr, O.J.L. Rackham, P. Rizzu, D. Fernando Sánchez Martinez, A. Sandelin, P. Sanjana, C.A.M. Semple, Y. Shibayama, D.M. Sivaraman, T. Suzuki, S.C. Szumowski, M. Tagami, M.S. Taylor, C. Terao, M. Thodberg, S. Thongjuea, V. Tripathi, I. Ulitsky, R. Verardo, I.E. Vorontsov, C. Yamamoto, R.S. Young39, J.K. Baillie, A.R.R. Forrest, R. Guigó, M.M. Hoffman, C.C. Hon, T. Kasukawa, S. Kauppinen, J. Kere, B. Lenhard, C. Schneider, H. Suzuki, K. Yagi, M.J.L. de Hoon, J.W. Shin and P. Carninci, Jul 2020, Genome Research. 30(7):1060-1072

2019

2019

L. Geirsdottir, E. David, H. Keren-Shaul, A. Weiner, S.C. Bohlen, J. Neuber, A. Balic, A. Giladi, F. Sheban, C.A. Dutertre, C. Pfeifle, F. Peri, A. Raffo-Romero, J. Vizioli, K. Matiasek, C. Scheiwe, S. Meckel, K. Mätz-Rensing, F. van der Meer, F. R. Thormodsson, C. Stadelmann, N. Zilkha, T. Kimchi, F. Ginhoux, I. Ulitsky, D. Erny, I. Amit and M. Prinz. , Dec 2019, Cell. 179, 7, p. 1609-1622

2018

2017

2017

R. Shamir, C. Klein, D. Amar, E.J. Vollstedt, M. Bonin, M. Usenovic, Y.C. Wong, A. Maver, S. Poths, H. Safer, J.C. Corvol, S. Lesage, O. Lavi, G. Deuschl, G. Kuhlenbaeumer, H. Pawlack, I. Ulitsky, M. Kasten, O. Riess, A. Brice, B. Peterlin and D. Krainc, Feb 2017, Neurology. 89, 16, p. 1676-1683

2017

2016

2016

R Ben-Tov Perry and I. Ulitsky, Feb 2016, Development. 143, p. 3882-3894

2015

2015

K. Bahar-Halpern, I. Caspi, D. Lemze, M. Levy, S. Landen, E. Elinav, I. Ulitsky and S. Itzkovitz, Feb 2015, Cell Reports. 13, p. 2653-2662

2015

Y. Enuka, M. Lauriola, M.E. Feldman, A. Sas-Chen, I. Ulitsky and Y. Yarden, Feb 2015, Nucleic Acids Research. 44, p. 1370-1383

2013

2013

V.C. Auyeung, I. Ulitsky, S.E. McGeary and D.P. Bartel, Feb 2013, Cell. 152, p. 844-858

2012

2012

I. Ulitsky, A. Shkumatava, C. Jan, A.O. Subtelny, D. Koppstein, H. Sive and D.P. Bartel, Feb 2012, Genome Research. 22, p. 2054-2066

2011

2011
2011

L.C. Laurent, I. Ulitsky, I. Slavin, H. Tran, A. Schork, R. Morey, C. Lynch, J.V. Harness, S. Lee, M.J. Barrero, S. Ku, M. Martynova, R. Semechkin, V. Galat, J. Gottesfeld, J.C. Izpisua Belmonte, C. Murry, H.S. Keirstead, H.S. Park, U. Schmidt, A.L. Laslett, F.J. Muller, C.M. Nievergelt, R. Shamir and J.F. Loring, Feb 2011, Cell Stem Cell. 8, p. 106-118

2011

A. Paz, Z. Brownstein, Y. Ber, S. Bialik, E. David, D. Sagir, I. Ulitsky, R. Elkon, A. Kimchi, K.B. Avraham, Y. Shiloh, R. Shamir, Feb 2011, Nucleic Acids Research. 39, p. D793-D799

2010

2010

I. Ulitsky, A. Krishnamurthy, R.M. Karp and R. Shamir, Feb 2010, PLoS One. 5,

2010

I. Ulitsky, L.C. Laurent and R. Shamir, Feb 2010, Nucleic Acids Research. 38

2010

P.S. Aguilar, F. Fröhlich, M. Rehman, M. Shales, I. Ulitsky, A. Olivera-Couto, H. Braberg, R. Shamir, P. Walter, M. Mann, C.S. Ejsing, N.J. Krogan and T.C. Walther. A, Feb 2010, Nature Structural & Molecular Biology. 17, p. 901-U175

2010

S. Abraham, S.D. Sheridan, L.C. Laurent, K. Albert, C. Stubban, I. Ulitsky, B. Miller, J.F. Loring and R.R. Rao, Feb 2010, Biochemical and Biophysical Research Communications. 393, p. 211-216

2010

G.H. Romano, Y. Gurevich, O. Lavi, I. Ulitsky, R. Shamir and M. Kupiec, Feb 2010, Molecular Systems Biology. 6,

2010

I. Ulitsky, A. Maron-Katz, S. Shavit, D. Sagir, C. Linhart, R. Elkon, A. Tanay, R. Sharan, Y. Shiloh and R. Shamir, Feb 2010, Nature Protocols. 5, p. 303-322

2010
Discovering Transcriptional Modules by Combined Analysis of Expression Profiles and Regulatory Sequences

Y. Halperin, C. Linhart, I. Ulitsky and R. Shamir, Feb 2010, RESEARCH IN COMPUTATIONAL MOLECULAR BIOLOGY, PROCEEDINGS. 6044, p. 578-579

2009

2009

I. Ulitsky and R. Shamir, Feb 2009, Bioinformatics. 25, p. 1158-1164

2008

2008

F.J. Mueller, D. Kostka, L. Laurent, I. Ulitsky, R. Williams, C. Lu, I.H. Park, M.S. Rao, R. Shamir, P.H. Schwartz, N.O. Schmidt and J.F. Loring, Feb 2008, Nature. 455, p. 401-U55

2008

L.C. Laurent, J. Chen, I. Ulitsky, F.J Mueller, C. Lu, R. Shamir, J.B. Fan and J.F. Loring, Feb 2008, Stem Cells. 26, p. 1506-1516

2008

R. Elkon, R. Vesterman, N. Amit, I. Ulitsky, M. Weisz, N. Orlev, G. Sternberg, R. Blekhman, J. Assa, Y. Shiloh and R. Shamir, Feb 2008, BMC Bioinformatics. 9,

2008
Detecting disease-specific dysregulated pathways via analysis of clinical expression profiles

I. Ulitsky, R.M. Karp and R. Shamir, Feb 2008, RECOMB PROCEEDINGS. 4955, p. 347-359

2007

2007
2007

R. Sharan, I. Ulitsky and R. Shamir, Feb 2007, Molecular Systems Biology. 3,

2007

I. Ulitsky and R. Shamir, Feb 2007, BMC Systems Biology. 1,

2006

2006

I. Ulitsky, D. Burstein, T. Tuller and B. Chor, Feb 2006, Journal of Computational Biology. 13, p. 336-350

2005