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January 12, 2015

  • Date:25SundayFebruary 2024

    The Clore Center for Biological Physics

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    Time
    13:15 - 14:30
    Title
    Tails and (boson) peaks in the glassy vibrational density of states
    Location
    Nella and Leon Benoziyo Physics Library
    LecturerAvraham Moriel
    Princeton University - The Department of Mechanical and Aerospace Engineering
    Organizer
    Clore Center for Biological Physics
    Contact
    AbstractShow full text abstract about Due to their intrinsic nonequilibrium and disordered natur...»

    Due to their intrinsic nonequilibrium and disordered nature, glasses feature low-frequency, nonphononic vibrations, in addition to phonons. These excess modes generate a peak —the boson peak— in the ratio of the vibrational density of state (VDoS) and Debye’s VDoS of phonons. Yet, the excess vibrations and the boson peak are not fully understood. After presenting the experimental evidence of the boson peak, we will discuss additional universal characteristics of glassy low frequency VDoS obtained through numerical simulations. We will then examine a recently analyzed mean-field model capturing the universal low-frequency glassy VDoS characteristics. Combining reanalyzed experimental data and computer simulations, we will observe that the same mean-field model also captures the origin, nature and properties of the boson peak, yielding a unified physical picture of the low-frequency VDoS spectra of glasses.

    FOR THE LATEST UPDATES AND CONTENT ON SOFT MATTER AND BIOLOGICAL PHYSICS AT THE WEIZMANN, VISIT OUR WEBSITE: https://www.biosoftweizmann.com/

    Lecture
  • Date:26MondayFebruary 2024

    PhD Thesis Defense by Marko Dunjic (Dr. Yonatan Stelzer Lab)

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    Time
    14:00 - 16:00
    Title
    Histone Exchange Mechanisms Of Epigenetic Regulation In Pluripotency And Cell Commitment
    Location
    Ullmann Building of Life Sciences
    LecturerMarko Dunjic
    Dr. Yonatan Stelzer Lab
    Organizer
    Department of Molecular Cell Biology
    Contact
    Lecture
  • Date:26MondayFebruary 2024

    EPS AI discussion seminar - Towards a Unified Conversational Model for Remote Sensing Imagery

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    Time
    15:00 - 15:00
    Location
    Sussman Family Building for Environmental Sciences
    LecturerSalman Khan (MBZUAI)
    Organizer
    Department of Earth and Planetary Sciences
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    Lecture
  • Date:28WednesdayFebruary 2024

    Immunology and Regenerative Biology Colloquium

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    Time
    11:00 - 12:00
    Title
    Multi-Potent Lung Stem Cells for Lung Regeneration
    Location
    Max and Lillian Candiotty Building
    LecturerProf. Yair Reisner
    Professor Emeritus, Weizmann Institute of Science Head, Stem Cell Research at the Department of Stem Cell Transplantation & Cellular Therapy; MD Anderson Cancer Center; Houston, Texas
    Organizer
    Department of Immunology and Regenerative Biology
    Contact
    Lecture
  • Date:29ThursdayFebruary 2024

    Geometric Functional Analysis and Probability Seminar

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    Time
    13:30 - 14:30
    Title
    Towards a Floquet Theory for Periodic Jacobi Matrices on Trees
    Location
    Jacob Ziskind Building
    LecturerJonathan Breuer
    HUJI
    Organizer
    Department of Mathematics
    Contact
    AbstractShow full text abstract about Periodic Jacobi matrices on the line have a very rich spectr...»
    Periodic Jacobi matrices on the line have a very rich spectral theory, one of whose ingredients is the Floquet theory of eigenfunctions. In this talk we will discuss ongoing work that attempts to generalize this theory to more general trees. We will describe some results obtained in joint works with Jess Banks, Jorge Garza Vargas, Eyal Seelig and Barry Simon.
    Lecture
  • Date:29ThursdayFebruary 2024

    Highly multiplexed imaging of tissues with subcellular resolution by imaging mass cytometry

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    Time
    14:00 - 14:00
    LecturerProf. Bernd Bodenmiller
    Organizer
    Dwek Institute for Cancer Therapy Research
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    Lecture
  • Date:03SundayMarch 2024

    The Clore Center for Biological Physics

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    Time
    13:15 - 14:30
    Title
    A Statistical Physics Approach to Bacteria under Strong Perturbations
    Location
    Nella and Leon Benoziyo Physics Library
    LecturerProf. Nathalie Q. Balaban
    Racah Institute of Physics, The Hebrew University
    Organizer
    Clore Center for Biological Physics
    Contact
    AbstractShow full text abstract about Statistical physics successfully accounts for phenomena invo...»
    Statistical physics successfully accounts for phenomena involving a large number of components using a probabilistic approach with predictions for collective properties of the system. While biological cells contain a very large number of interacting components, (proteins, RNA molecules, metabolites, etc.), the cellular network is understood as a particular, highly specific, choice of interactions shaped by evolution, and therefore difficultly amenable to a statistical physics description. Here we show that when a cell encounters an acute but non-lethal stress, its perturbed state can be modelled as random network dynamics. Strong perturbations may therefore reveal the dynamics of the underlying network that are amenable to a statistical physics description. We show that our experimental measurements of the recovery dynamics of bacteria from a strong perturbation can be described in the framework of physical aging in disordered systems (Kaplan Y. et al, Nature 2021). Further experiments on gene expression confirm predictions of the model. The predictive description of cells under and after strong perturbations should lead to new ways to fight bacterial infections, as well as the relapse of cancer after treatment.
    Lecture
  • Date:03SundayMarch 2024

    The multimodal regulation of liver glucose metabolism

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    Time
    15:00 - 16:00
    Location
    Arthur and Rochelle Belfer Building for Biomedical Research
    LecturerDr. Kfir Sharabi
    The Institute of Biochemistry, Food Science, and Nutrition. The Robert H. Smith Faculty of Agriculture, Food and Environment. The hebrew University of Jerusalem.
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    Lecture
  • Date:04MondayMarch 2024

    Foundations of Computer Science Seminar

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    Time
    11:15 - 12:15
    Title
    Towards general-purpose program obfuscation via local mixing
    Location
    Jacob Ziskind Building
    LecturerRan Canetti
    Boston University
    Organizer
    Department of Computer Science and Applied Mathematics
    Contact
    AbstractShow full text abstract about We explore the possibility of obtaining general-purpose prog...»
    We explore the possibility of obtaining general-purpose program obfuscation for all circuits by way of making only simple, local, functionality-preserving random perturbations in the circuit structure. Towards this goal, we use the additional structure provided by reversible circuits,  but no additional algebraic structure.


    We start by formulating a new (and relatively weak) obfuscation task regarding the ability to obfuscate  random circuits of  bounded length.  We call such obfuscators  Random Input
    Lecture
  • Date:05TuesdayMarch 2024

    50 Shades of Molecular Modeling in Biomolecular Sciences

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    Time
    10:00 - 11:00
    Location
    Nella and Leon Benoziyo Building for Biological Sciences
    LecturerDr. Sofya Lushchekina
    Dr. Sofya Lushchekina, Dept. of Brain Sciences, Weizmann Institute of Science
    Organizer
    Department of Biomolecular Sciences
    Contact
    AbstractShow full text abstract about The presentation will cover a spectrum of current applicatio...»
    The presentation will cover a spectrum of current applications of atomistic molecular modeling methods in biomolecular problems. Examples of applications of molecular docking, molecular dynamics, combined quantum mechanics/molecular mechanics and dynamics methods, enhanced sampling, and coarse-graining methods, recent machine learning protein structure prediction methods for studying protein structure and dynamics, protein-ligand and protein-protein interactions, and mechanisms of enzymatic reactions will be considered. The advantages and limitations of different computational methods will be discussed.

    Lecture
  • Date:05TuesdayMarch 2024

    Machine learning for protein functional site annotation and peptide binder design

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    Time
    14:00 - 15:00
    Location
    Gerhard M.J. Schmidt Lecture Hall
    LecturerDr. Jerome Tubiana
    Blavatnik School of Computer Science, Tel Aviv University
    Organizer
    Department of Chemical and Structural Biology
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    Lecture
  • Date:06WednesdayMarch 2024

    NEUROMORPHOCHIP ORGANOIDS REVEAL A NOVEL MECHANISM FOR MICROCEPHALY

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    Time
    10:00 - 11:00
    Location
    Arthur and Rochelle Belfer Building for Biomedical Research
    LecturerProf. Orly Reiner
    Department of Molecular Genetics
    Contact
    Lecture
  • Date:07ThursdayMarch 2024

    Innovation in the Weizmann Genomics Core – next generation technology outreach

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    Time
    09:00 - 10:00
    Location
    Max and Lillian Candiotty Building
    LecturerDr. Hadas Keren-Shaul
    Genomics, Dept. of LSCF / G-INCPM
    Organizer
    Department of Life Sciences Core Facilities
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    Lecture
  • Date:07ThursdayMarch 2024

    Geometric Functional Analysis and Probability Seminar

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    Time
    13:30 - 14:30
    Title
    Some limit theorems for U-max statistics with geometric structure
    Location
    Jacob Ziskind Building
    LecturerKatya Simarova
    St. Petersburg
    Organizer
    Department of Mathematics
    Contact
    AbstractShow full text abstract about U-max statistics, introduced by Lao and Mayer in 2008, serve...»
    U-max statistics, introduced by Lao and Mayer in 2008, serve as an extreme-value analogue of U-statistics. Natural examples of U-max statistics include the maximum of random variables and the diameters of convex hulls. However, more complex examples exist, such as the maximal perimeter or area of an m-polygon calculated over all possible m-sets of points from a random sample. This talk will focus on specific U-max statistics that possess a geometric structure and derive limit theorems for them, with the Weibull distribution as a limit.
    Lecture
  • Date:10SundayMarch 2024

    Chemical and Biological Physics Guest seminar

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    Time
    16:00 - 17:00
    Title
    Photodynamics of molecular probes in solutions, cells, and organic surfaces
    Location
    Perlman Chemical Sciences Building
    LecturerProf. Oleg Vasyutinskii
    Peter the Great St. Petersburg Polytechnic University
    Organizer
    Department of Chemical and Biological Physics
    Contact
    AbstractShow full text abstract about The lecture presents recent results obtained in the laborato...»
    The lecture presents recent results obtained in the laboratory of Prof. Oleg Vasyutinskii in the Ioffe Institute, St.Petersburg, Russia along several directions of application of modern laser techniques for investigation of the dynamics of molecules relevant for biology and medicine. The particular directions under discussion will be as follows.
    • Investigation of energy transfer in the excited states of molecular probes in solutions by means of polarized fluorescence spectroscopy.
    • Pump-and-probe polarization modulation spectroscopy for investigation of sub-picosecond dynamics in excited biomolecules.
    • Dynamics of singlet oxygen generation and degradation in solutions and on organic surfaces.

    Lecture
  • Date:11MondayMarch 2024

    EPS AI discussion seminar - Applications of Self Organizing Maps for the classification of cyclones in the Mediterranean

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    Time
    15:00 - 15:00
    Location
    also via zoom: https://weizmann.zoom.us/j/95890082380?pwd=TnZxc1NoSkxUbjM3SVB0dVpCdVRtZz09
    Organizer
    Department of Earth and Planetary Sciences
    Contact
    AbstractShow full text abstract about The use of SOM in atmospheric science has grown popular ove...»
    The use of SOM in atmospheric science has
    grown popular over the recent years. The SOM's
    strength lies in its ability to project the
    continuum of a given dynamical system to an
    easily understood spectrum of dominant states.
    The SOM relies on a neural network, where each
    grid-point in each node (cluster) is assigned with
    a specific weight for a given input parameter. The
    SOM then operates competitively, shifting
    individual members between the nodes to
    minimize internal node variability while
    maximizing the distances between the nodes.
    Here, two novel SOM applications are
    demonstrated, recently used to classify
    Mediterranean cyclones from an upper-level PV
    perspective.
    Each approach yields the potential to enhance the
    understanding of different aspects of
    Mediterranean cyclone's predictability and is
    readily applicable to other regions of interest.
    Lecture
  • Date:12TuesdayMarch 2024

    Travelling waves or sequentially activated modules: mapping the granularity of cortical propagation

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    Time
    12:30 - 13:30
    Location
    Gerhard M.J. Schmidt Lecture Hall
    LecturerDr. Mark Shein-Idelson
    Dept of Neurobiology, Faculty of Life Sciences Tel Aviv University
    Organizer
    Department of Brain Sciences
    Contact
    AbstractShow full text abstract about : Numerous studies have identified travelling waves in the c...»
    : Numerous studies have identified travelling waves in the cortex and suggested they play important roles in brain processing. These waves are most often measured using macroscopic methods that do not allow assessing wave dynamics at the single neuron scale and analyzed using techniques that smear neuronal excitability boundaries. In my talk, I will present a new approach for discriminating travelling waves from modular activation. Using this approach I will show that Calcium dynamics in mouse cortex and spiking activity in turtle cortex are dominated by modular activation rather than by propagating waves. I will then show how sequentially activating two discrete brain areas can appear as travelling waves in EEG simulations and present an analytical model in which modular activation generates wave-like activity with variable directions, velocities, and spatial patterns. I will end by illustrating why a careful distinction between modular and wave excitability profiles across scales will be critical for understanding the nature of cortical computations.
    Lecture
  • Date:12TuesdayMarch 2024

    Seminar for PhD thesis defense

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    Time
    13:00 - 14:00
    Location
    Arthur and Rochelle Belfer Building for Biomedical Research
    LecturerGabriela Lobinska
    Organizer
    Department of Molecular Genetics
    Contact
    Lecture
  • Date:13WednesdayMarch 2024

    ABC CHATS: Ronit Harpaz - From Idea to a Startup

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    Time
    14:00 - 16:00
    Title
    An entrepreneur’s story
    Location
    George and Esther Sagan Students' Residence Hall
    LecturerRonit Harpaz
    Co-Founder & CEO of Endoron Medical
    Contact
    Lecture
  • Date:13WednesdayMarch 2024

    A brain-computer interface for studying long-term changes of hippocampal neural codes

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    Time
    15:30 - 16:30
    Location
    Arthur and Rochelle Belfer Building for Biomedical Research
    LecturerLinor Baliti Turgeman-PhD Thesis Defense
    Prof. Yaniv Ziv Lab
    Organizer
    Department of Brain Sciences
    Contact
    AbstractShow full text abstract about Brain-computer interfaces (BCI), have important applications...»
    Brain-computer interfaces (BCI), have important applications both in medicine and as a research tool. Typically, BCIs rely on electrode arrays to capture electrical signals, which are then processed by algorithms to translate neural activity into actions of an external device. However, these electrophysiological techniques are often inadequate for tracking large populations of the same neurons over timescales longer than ~1 day. To address this, we developed calcium imaging-based BCI for freely behaving mice, facilitating continuous recording and analysis of specific neuronal populations over extended periods. This BCI allowed investigating the long-term neuronal coding dynamics in the hippocampus, revealing changes in neuronal population activity both within and across days. I am hopeful that this BCI will advance studies on spatial cognition and long-term memory.
    Lecture

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