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January 12, 2015
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Date:25SundayFebruary 2024Lecture
The Clore Center for Biological Physics
More information Time 13:15 - 14:30Title Tails and (boson) peaks in the glassy vibrational density of statesLocation Nella and Leon Benoziyo Physics LibraryLecturer Avraham Moriel
Princeton University - The Department of Mechanical and Aerospace EngineeringOrganizer Clore Center for Biological PhysicsContact Abstract Show full text abstract about Due to their intrinsic nonequilibrium and disordered natur...»
Due to their intrinsic nonequilibrium and disordered nature, glasses feature low-frequency, nonphononic vibrations, in addition to phonons. These excess modes generate a peak —the boson peak— in the ratio of the vibrational density of state (VDoS) and Debye’s VDoS of phonons. Yet, the excess vibrations and the boson peak are not fully understood. After presenting the experimental evidence of the boson peak, we will discuss additional universal characteristics of glassy low frequency VDoS obtained through numerical simulations. We will then examine a recently analyzed mean-field model capturing the universal low-frequency glassy VDoS characteristics. Combining reanalyzed experimental data and computer simulations, we will observe that the same mean-field model also captures the origin, nature and properties of the boson peak, yielding a unified physical picture of the low-frequency VDoS spectra of glasses.
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Date:26MondayFebruary 2024Lecture
PhD Thesis Defense by Marko Dunjic (Dr. Yonatan Stelzer Lab)
More information Time 14:00 - 16:00Title Histone Exchange Mechanisms Of Epigenetic Regulation In Pluripotency And Cell CommitmentLocation Ullmann Building of Life SciencesLecturer Marko Dunjic
Dr. Yonatan Stelzer LabOrganizer Department of Molecular Cell BiologyContact -
Date:26MondayFebruary 2024Lecture
EPS AI discussion seminar - Towards a Unified Conversational Model for Remote Sensing Imagery
More information Time 15:00 - 15:00Location Sussman Family Building for Environmental SciencesLecturer Salman Khan (MBZUAI) Organizer Department of Earth and Planetary SciencesContact -
Date:28WednesdayFebruary 2024Lecture
Immunology and Regenerative Biology Colloquium
More information Time 11:00 - 12:00Title Multi-Potent Lung Stem Cells for Lung RegenerationLocation Max and Lillian Candiotty BuildingLecturer Prof. Yair Reisner
Professor Emeritus, Weizmann Institute of Science Head, Stem Cell Research at the Department of Stem Cell Transplantation & Cellular Therapy; MD Anderson Cancer Center; Houston, TexasOrganizer Department of Immunology and Regenerative BiologyContact -
Date:29ThursdayFebruary 2024Lecture
Geometric Functional Analysis and Probability Seminar
More information Time 13:30 - 14:30Title Towards a Floquet Theory for Periodic Jacobi Matrices on TreesLocation Jacob Ziskind BuildingLecturer Jonathan Breuer
HUJIOrganizer Department of MathematicsContact Abstract Show full text abstract about Periodic Jacobi matrices on the line have a very rich spectr...» Periodic Jacobi matrices on the line have a very rich spectral theory, one of whose ingredients is the Floquet theory of eigenfunctions. In this talk we will discuss ongoing work that attempts to generalize this theory to more general trees. We will describe some results obtained in joint works with Jess Banks, Jorge Garza Vargas, Eyal Seelig and Barry Simon.
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Date:29ThursdayFebruary 2024Lecture
Highly multiplexed imaging of tissues with subcellular resolution by imaging mass cytometry
More information Time 14:00 - 14:00Lecturer Prof. Bernd Bodenmiller Organizer Dwek Institute for Cancer Therapy ResearchContact -
Date:03SundayMarch 2024Lecture
The Clore Center for Biological Physics
More information Time 13:15 - 14:30Title A Statistical Physics Approach to Bacteria under Strong PerturbationsLocation Nella and Leon Benoziyo Physics LibraryLecturer Prof. Nathalie Q. Balaban
Racah Institute of Physics, The Hebrew UniversityOrganizer Clore Center for Biological PhysicsContact Abstract Show full text abstract about Statistical physics successfully accounts for phenomena invo...» Statistical physics successfully accounts for phenomena involving a large number of components using a probabilistic approach with predictions for collective properties of the system. While biological cells contain a very large number of interacting components, (proteins, RNA molecules, metabolites, etc.), the cellular network is understood as a particular, highly specific, choice of interactions shaped by evolution, and therefore difficultly amenable to a statistical physics description. Here we show that when a cell encounters an acute but non-lethal stress, its perturbed state can be modelled as random network dynamics. Strong perturbations may therefore reveal the dynamics of the underlying network that are amenable to a statistical physics description. We show that our experimental measurements of the recovery dynamics of bacteria from a strong perturbation can be described in the framework of physical aging in disordered systems (Kaplan Y. et al, Nature 2021). Further experiments on gene expression confirm predictions of the model. The predictive description of cells under and after strong perturbations should lead to new ways to fight bacterial infections, as well as the relapse of cancer after treatment. -
Date:03SundayMarch 2024Lecture
The multimodal regulation of liver glucose metabolism
More information Time 15:00 - 16:00Location Arthur and Rochelle Belfer Building for Biomedical ResearchLecturer Dr. Kfir Sharabi
The Institute of Biochemistry, Food Science, and Nutrition. The Robert H. Smith Faculty of Agriculture, Food and Environment. The hebrew University of Jerusalem.Contact -
Date:04MondayMarch 2024Lecture
Foundations of Computer Science Seminar
More information Time 11:15 - 12:15Title Towards general-purpose program obfuscation via local mixingLocation Jacob Ziskind BuildingLecturer Ran Canetti
Boston UniversityOrganizer Department of Computer Science and Applied MathematicsContact Abstract Show full text abstract about We explore the possibility of obtaining general-purpose prog...» We explore the possibility of obtaining general-purpose program obfuscation for all circuits by way of making only simple, local, functionality-preserving random perturbations in the circuit structure. Towards this goal, we use the additional structure provided by reversible circuits, but no additional algebraic structure.
We start by formulating a new (and relatively weak) obfuscation task regarding the ability to obfuscate random circuits of bounded length. We call such obfuscators Random Input -
Date:05TuesdayMarch 2024Lecture
50 Shades of Molecular Modeling in Biomolecular Sciences
More information Time 10:00 - 11:00Location Nella and Leon Benoziyo Building for Biological SciencesLecturer Dr. Sofya Lushchekina
Dr. Sofya Lushchekina, Dept. of Brain Sciences, Weizmann Institute of ScienceOrganizer Department of Biomolecular SciencesContact Abstract Show full text abstract about The presentation will cover a spectrum of current applicatio...» The presentation will cover a spectrum of current applications of atomistic molecular modeling methods in biomolecular problems. Examples of applications of molecular docking, molecular dynamics, combined quantum mechanics/molecular mechanics and dynamics methods, enhanced sampling, and coarse-graining methods, recent machine learning protein structure prediction methods for studying protein structure and dynamics, protein-ligand and protein-protein interactions, and mechanisms of enzymatic reactions will be considered. The advantages and limitations of different computational methods will be discussed.
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Date:05TuesdayMarch 2024Lecture
Machine learning for protein functional site annotation and peptide binder design
More information Time 14:00 - 15:00Location Gerhard M.J. Schmidt Lecture HallLecturer Dr. Jerome Tubiana
Blavatnik School of Computer Science, Tel Aviv UniversityOrganizer Department of Chemical and Structural BiologyContact -
Date:06WednesdayMarch 2024Lecture
NEUROMORPHOCHIP ORGANOIDS REVEAL A NOVEL MECHANISM FOR MICROCEPHALY
More information Time 10:00 - 11:00Location Arthur and Rochelle Belfer Building for Biomedical ResearchLecturer Prof. Orly Reiner
Department of Molecular GeneticsContact -
Date:07ThursdayMarch 2024Lecture
Innovation in the Weizmann Genomics Core – next generation technology outreach
More information Time 09:00 - 10:00Location Max and Lillian Candiotty BuildingLecturer Dr. Hadas Keren-Shaul
Genomics, Dept. of LSCF / G-INCPMOrganizer Department of Life Sciences Core FacilitiesContact -
Date:07ThursdayMarch 2024Lecture
Geometric Functional Analysis and Probability Seminar
More information Time 13:30 - 14:30Title Some limit theorems for U-max statistics with geometric structureLocation Jacob Ziskind BuildingLecturer Katya Simarova
St. PetersburgOrganizer Department of MathematicsContact Abstract Show full text abstract about U-max statistics, introduced by Lao and Mayer in 2008, serve...» U-max statistics, introduced by Lao and Mayer in 2008, serve as an extreme-value analogue of U-statistics. Natural examples of U-max statistics include the maximum of random variables and the diameters of convex hulls. However, more complex examples exist, such as the maximal perimeter or area of an m-polygon calculated over all possible m-sets of points from a random sample. This talk will focus on specific U-max statistics that possess a geometric structure and derive limit theorems for them, with the Weibull distribution as a limit.
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Date:10SundayMarch 2024Lecture
Chemical and Biological Physics Guest seminar
More information Time 16:00 - 17:00Title Photodynamics of molecular probes in solutions, cells, and organic surfacesLocation Perlman Chemical Sciences BuildingLecturer Prof. Oleg Vasyutinskii
Peter the Great St. Petersburg Polytechnic UniversityOrganizer Department of Chemical and Biological PhysicsContact Abstract Show full text abstract about The lecture presents recent results obtained in the laborato...» The lecture presents recent results obtained in the laboratory of Prof. Oleg Vasyutinskii in the Ioffe Institute, St.Petersburg, Russia along several directions of application of modern laser techniques for investigation of the dynamics of molecules relevant for biology and medicine. The particular directions under discussion will be as follows.
• Investigation of energy transfer in the excited states of molecular probes in solutions by means of polarized fluorescence spectroscopy.
• Pump-and-probe polarization modulation spectroscopy for investigation of sub-picosecond dynamics in excited biomolecules.
• Dynamics of singlet oxygen generation and degradation in solutions and on organic surfaces.
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Date:11MondayMarch 2024Lecture
EPS AI discussion seminar - Applications of Self Organizing Maps for the classification of cyclones in the Mediterranean
More information Time 15:00 - 15:00Location also via zoom: https://weizmann.zoom.us/j/95890082380?pwd=TnZxc1NoSkxUbjM3SVB0dVpCdVRtZz09Organizer Department of Earth and Planetary SciencesContact Abstract Show full text abstract about The use of SOM in atmospheric science has grown popular ove...» The use of SOM in atmospheric science has
grown popular over the recent years. The SOM's
strength lies in its ability to project the
continuum of a given dynamical system to an
easily understood spectrum of dominant states.
The SOM relies on a neural network, where each
grid-point in each node (cluster) is assigned with
a specific weight for a given input parameter. The
SOM then operates competitively, shifting
individual members between the nodes to
minimize internal node variability while
maximizing the distances between the nodes.
Here, two novel SOM applications are
demonstrated, recently used to classify
Mediterranean cyclones from an upper-level PV
perspective.
Each approach yields the potential to enhance the
understanding of different aspects of
Mediterranean cyclone's predictability and is
readily applicable to other regions of interest. -
Date:12TuesdayMarch 2024Lecture
Travelling waves or sequentially activated modules: mapping the granularity of cortical propagation
More information Time 12:30 - 13:30Location Gerhard M.J. Schmidt Lecture HallLecturer Dr. Mark Shein-Idelson
Dept of Neurobiology, Faculty of Life Sciences Tel Aviv UniversityOrganizer Department of Brain SciencesContact Abstract Show full text abstract about : Numerous studies have identified travelling waves in the c...» : Numerous studies have identified travelling waves in the cortex and suggested they play important roles in brain processing. These waves are most often measured using macroscopic methods that do not allow assessing wave dynamics at the single neuron scale and analyzed using techniques that smear neuronal excitability boundaries. In my talk, I will present a new approach for discriminating travelling waves from modular activation. Using this approach I will show that Calcium dynamics in mouse cortex and spiking activity in turtle cortex are dominated by modular activation rather than by propagating waves. I will then show how sequentially activating two discrete brain areas can appear as travelling waves in EEG simulations and present an analytical model in which modular activation generates wave-like activity with variable directions, velocities, and spatial patterns. I will end by illustrating why a careful distinction between modular and wave excitability profiles across scales will be critical for understanding the nature of cortical computations.
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Date:12TuesdayMarch 2024Lecture
Seminar for PhD thesis defense
More information Time 13:00 - 14:00Location Arthur and Rochelle Belfer Building for Biomedical ResearchLecturer Gabriela Lobinska Organizer Department of Molecular GeneticsContact -
Date:13WednesdayMarch 2024Lecture
ABC CHATS: Ronit Harpaz - From Idea to a Startup
More information Time 14:00 - 16:00Title An entrepreneur’s storyLocation George and Esther Sagan Students' Residence HallLecturer Ronit Harpaz
Co-Founder & CEO of Endoron MedicalContact -
Date:13WednesdayMarch 2024Lecture
A brain-computer interface for studying long-term changes of hippocampal neural codes
More information Time 15:30 - 16:30Location Arthur and Rochelle Belfer Building for Biomedical ResearchLecturer Linor Baliti Turgeman-PhD Thesis Defense
Prof. Yaniv Ziv LabOrganizer Department of Brain SciencesContact Abstract Show full text abstract about Brain-computer interfaces (BCI), have important applications...» Brain-computer interfaces (BCI), have important applications both in medicine and as a research tool. Typically, BCIs rely on electrode arrays to capture electrical signals, which are then processed by algorithms to translate neural activity into actions of an external device. However, these electrophysiological techniques are often inadequate for tracking large populations of the same neurons over timescales longer than ~1 day. To address this, we developed calcium imaging-based BCI for freely behaving mice, facilitating continuous recording and analysis of specific neuronal populations over extended periods. This BCI allowed investigating the long-term neuronal coding dynamics in the hippocampus, revealing changes in neuronal population activity both within and across days. I am hopeful that this BCI will advance studies on spatial cognition and long-term memory.
