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February 05, 2018
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Date:08SundayApril 2018Lecture
Behind the Scenes of Scientific Publishing at EMBO
More information Time 10:00 - 11:00Location Max and Lillian Candiotty BuildingLecturer Dr. Anne Nielsen Organizer Department of Immunology and Regenerative BiologyContact Abstract Show full text abstract about Publishing research papers is a cornerstone of working in li...» Publishing research papers is a cornerstone of working in life sciences, but do you know what actually happens to your manuscript once it is submitted to a scientific journal? Anne Nielsen – scientific editor for The EMBO journal – will take you behind the scenes of scientific publishing at EMBO and explain how editors make decisions, find referees and work with authors to improve the revised manuscript. She will also discuss some of the challenges faced by the current publishing landscape, talk about the efforts EMBO is making to prevent errors and fraud from entering the literature, and offer advice on manuscript writing and submission. -
Date:08SundayApril 2018Lecture
From kB to kB: Universal and efficient entropy estimation using a compression algorithm
More information Time 11:00 - 12:00Location Perlman Chemical Sciences BuildingLecturer Prof. Roy Beck
School of Physics and Astronomy, TAUOrganizer Department of Molecular Chemistry and Materials ScienceContact Abstract Show full text abstract about Entropy and free-energy estimation are key in thermodynamic ...» Entropy and free-energy estimation are key in thermodynamic characterization of simulated systems ranging from spin models through polymers, colloids, protein structure, and drug-design. Current techniques suffer from being model specific, requiring abundant computation resources and simulation at conditions far from the studied realization. In this talk, I will present a novel universal scheme to calculate entropy using lossless compression algorithms and validate it on simulated systems of increasing complexity. Our results show accurate entropy values compared to benchmark calculations while being computationally effective. In molecular-dynamics simulations of protein folding, we exhibit unmatched detection capability of the folded states by measuring previously undetectable entropy fluctuations along the simulation timeline. Such entropy evaluation opens a new window onto the dynamics of complex systems and allows efficient free-energy calculations. -
Date:08SundayApril 2018Lecture
Molecular Genetics Departmental Seminars 2017-2018
More information Time 13:00 - 13:00Title Adaptive evolution of noise-buffering through transcription-factor duplicationLocation Arthur and Rochelle Belfer Building for Biomedical ResearchLecturer Michal Chapal Organizer Department of Molecular GeneticsContact -
Date:08SundayApril 2018Lecture
Islet 3D chromatin architecture provides insights into personalized medicine for type 2 diabetes
More information Time 15:00 - 16:00Location Arthur and Rochelle Belfer Building for Biomedical ResearchLecturer Prof. Jorge Ferrer
Department of Medicine, Imperial College London, UKContact -
Date:09MondayApril 2018Colloquia
"Inorganic nanotubes and fullerene-like nanoparticles at the crossroad between materials science and nanotechnology and their applications"
More information Time 11:00 - 12:15Location Gerhard M.J. Schmidt Lecture HallLecturer Prof. Reshef Tenne
Department of Materials and Interfaces, WISOrganizer Faculty of ChemistryContact Abstract Show full text abstract about After almost 100 years of research inorganic layered (2D) ma...» After almost 100 years of research inorganic layered (2D) materials, like MoS2, are currently used as catalysts, lubricants, and perhaps most importantly in rechargeable Li- ion batteries. After a short briefing on the history of 2D materials research,1 the concepts which lead to the first synthesis of hollow-cage nanostructures, including nanotubes (INT) and fullerene-like (IF) nanoparticles from 2D compounds, will be presented. The progress with the high-temperature synthesis and characterization of new inorganic nanotubes (INT) and fullerene-like (IF) nanoparticles (NP) will be presented. In particular, the synthesis and structure of nanotubes from the ternary “misfit” layered compounds (MLC), like LnS-TaS2 (Ln= La, Ce, Gd, Ho, Er), CaCoO-CoO2 and numerous other MLC were elucidated. More recently nanotubes (and nanoscrolls) from quaternary MLC were reported.
Major progress has been achieved in elucidating the structure of INT and IF using advanced microscopy techniques, like aberration corrected TEM and related techniques. Mechanical, electrical and optical measurements of individual WS2 nanotubes reveal their unique quasi-1D characteristics. This analysis demonstrate their different behavior compared to the bulk phase. Applications of the IF/INT as superior solid lubricants and for reinforcement of variety of polymers and light metal alloys was demonstrated. Few recent studies indicate that this brand of nanoparticles is less toxic than most nanoparticles. With expanding product lines, manufacturing and sales, these nanomaterials are gradually becoming an industrial commodity.
1. L. Panchakarla, B. Visic and R. Tenne, “Perspective”, J. Am. Chem. Soc. 2017, 139, 12865-12878. -
Date:09MondayApril 2018Lecture
Neural circuits for defensive responses
More information Time 12:45 - 12:45Location Nella and Leon Benoziyo Building for Brain ResearchLecturer Dr. Philip Tovote
Institute of Clinical Neurobiology, Wurzburg University, GermanyOrganizer Department of Brain SciencesContact Abstract Show full text abstract about Behavioral responses to threat encompass evolutionarily cons...» Behavioral responses to threat encompass evolutionarily conserved active or passive defensive motor responses, such as flight and freezing, respectively. Brain-wide distributed neural circuits mediate top-down control of the defense reaction and interact with ascending pathways that transmit interoceptive information from the periphery. Defensive action selection has been modelled around the concept of threat imminence, but the circuit mechanisms mediating different defensive behaviors and the switch between them remain unclear.
The seminar will present a circuit-centered systems neuroscience approach to characterize the neural circuits for defensive responses with a focus on the central nucleus of the amygdala (CEA) and midbrain periaqueductal grey (PAG), whose output selection is mediated by integration of local microcircuit interactions and external inputs. Our findings demonstrate that defensive action selection is a cue- and context dependent, multi-site process involving complex functional motifs within evolutionary old, mammalian “survival circuits”.
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Date:10TuesdayApril 2018Lecture
Cell Penetration and Membrane Fusion: Two Sides of the Same Coin
More information Time 10:00 - 11:00Location Nella and Leon Benoziyo Building for Biological SciencesLecturer Prof. Pavel Jungwirth
Institute of Organic Chemistry and Biochemistry of the CASOrganizer Department of Biomolecular SciencesContact Abstract Show full text abstract about Cell penetrating peptides have a unique potential for target...» Cell penetrating peptides have a unique potential for targeted drug delivery, therefore, mechanistic understanding of their membrane action has been sought since their discovery over 20 years ago. While ATP-driven endocytosis is known to play a major role in their internalization, there has been also ample evidence for the importance of passive translocation for which the direct mechanism, where the peptide is thought to directly pass through the membrane via a temporary pore, has been widely advocated. In this talk, I will question this view and demonstrate that arginine-rich cell penetrating peptides can instead enter vesicles and cells by inducing multilamellarity and fusion, analogously to the action of calcium ions. The molecular picture of this penetration mode, which differs qualitatively from the previously proposed direct mechanism, is provided by molecular dynamics simulations. In addition, the kinetics of vesicle agglomeration and fusion by nonaarginine, nonalysine, and calcium ions are documented in real time by fluorescence techniques and the induction of multilamellar phases in vesicles and cells is revealed both via electron microscopy and fluorescence spectroscopy. We thus show that the newly identified passive cell penetration mechanism is analoguous to vesicle fusion induced by calcium ions, demonstrating that the two processes are of a common mechanistic origin.
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Date:10TuesdayApril 2018Lecture
Cyclodextrin Complexation: From Solution-State Complexes to Paper-Based Devices
More information Time 11:00 - 12:00Location Helen and Milton A. Kimmelman BuildingLecturer Prof. Mindy Levine
University of Rhode IslandOrganizer Department of Molecular Chemistry and Materials ScienceContact -
Date:10TuesdayApril 2018Lecture
SEMINAR CANCELLED: Foraminifera as bioindicators of marine environments
More information Time 11:30 - 11:30Lecturer Prof. Sigal Abramovich
Department of Geological and Environmental Sciences, Ben Gurion University of the Negev, Beer ShevaOrganizer Department of Plant and Environmental SciencesContact -
Date:10TuesdayApril 2018Lecture
Prof. Ehud Duchovni - From the largest to the smallest - What can be learned from the humongous LHC accelerator on the structure of matter?
More information Time 12:00 - 12:00Title From the largest to the smallest - What can be learned from the humongous LHC accelerator on the structure of matter?Location Dolfi and Lola Ebner AuditoriumLecturer Prof. Ehud Duchovni Organizer Communications and Spokesperson DepartmentHomepage Contact -
Date:10TuesdayApril 2018Lecture
Emergence of behaviorally relevant motifs in the human cortex
More information Time 12:30 - 12:30Location Gerhard M.J. Schmidt Lecture HallLecturer Dr. Tomer Livne
Consultant, Prof. Dov Sagi Group Cortica Ltd, Tel AvivOrganizer Department of Brain SciencesContact -
Date:11WednesdayApril 2018Lecture
Special Guest Seminar
More information Time 11:00 - 11:00Title Apoptosis control by the unfolded protein responseLocation Arthur and Rochelle Belfer Building for Biomedical ResearchLecturer Avi Ashkenazi, PhD
Senior Staff Scientist, Cancer Immunology, Genentech Inc.; and Adjunct Professor, Biochemistry and Biophysics, University of California, San Francisco, CA, USAOrganizer Department of Molecular GeneticsContact Abstract Show full text abstract about Precise protein folding by the endoplasmic reticulum (ER) su...» Precise protein folding by the endoplasmic reticulum (ER) supports homeostasis, while cumulative protein misfolding causes ER stress and promotes disease. The kinases PERK and IRE1 help orchestrate the unfolded protein response (UPR) to alleviate ER stress; however, if stress persists, the UPR activates apoptosis to eliminate the damaged cell. We have previously shown that PERK drives cell death via transcriptional up-regulation of the pro-apoptotic death receptor DR5; we further showed that IRE1—which harbors both kinase and RNase modules—blocks apoptosis through regulated IRE1-dependent mRNA decay (RIDD) of DR5 (Lu et al, Science 2014). Recently, we turned to investigate the paradoxical observation that under irresolvable ER stress PERK activity persists, while IRE1 function attenuates. We discovered that PERK governs the attenuation of IRE1, through a phosphatase called RNA polymerase II-associated protein 2 (RPAP2). RPAP2 reverses IRE1 phosphorylation, inhibiting IRE1 RNase activation. This disrupts IRE1-dependent generation of the cytoprotective transcription factor XBP1s and dampens ER-associated degradation of misfolded proteins. Furthermore, it inhibits RIDD, thereby licensing DR5-mediated caspase activation and apoptotic cell death. Thus, under excessive ER stress, PERK attenuates IRE1 via RPAP2 to abort failed adaptation and trigger an apoptotic cell fate. -
Date:11WednesdayApril 2018Lecture
Special Guest Seminar
More information Time 11:00 - 12:00Title “Apoptosis control by the unfolded protein response”Location Arthur and Rochelle Belfer Building for Biomedical ResearchLecturer Dr. Avi Ashkenazi
Senior Staff Scientist, Cancer Immunology, Genentech Inc.; and Adjunct Professor, Biochemistry and Biophysics, University of California, San Francisco, CA, USAOrganizer Department of Molecular GeneticsContact Abstract Show full text abstract about Precise protein folding by the endoplasmic reticulum (ER) su...» Precise protein folding by the endoplasmic reticulum (ER) supports homeostasis, while cumulative protein misfolding causes ER stress and promotes disease. The kinases PERK and IRE1 help orchestrate the unfolded protein response (UPR) to alleviate ER stress; however, if stress persists, the UPR activates apoptosis to eliminate the damaged cell. We have previously shown that PERK drives cell death via transcriptional up-regulation of the pro-apoptotic death receptor DR5; we further showed that IRE1—which harbors both kinase and RNase modules—blocks apoptosis through regulated IRE1-dependent mRNA decay (RIDD) of DR5 (Lu et al, Science 2014). Recently, we turned to investigate the paradoxical observation that under irresolvable ER stress PERK activity persists, while IRE1 function attenuates. We discovered that PERK governs the attenuation of IRE1, through a phosphatase called RNA polymerase II-associated protein 2 (RPAP2). RPAP2 reverses IRE1 phosphorylation, inhibiting IRE1 RNase activation. This disrupts IRE1-dependent generation of the cytoprotective transcription factor XBP1s and dampens ER-associated degradation of misfolded proteins. Furthermore, it inhibits RIDD, thereby licensing DR5-mediated caspase activation and apoptotic cell death. Thus, under excessive ER stress, PERK attenuates IRE1 via RPAP2 to abort failed adaptation and trigger an apoptotic cell fate. -
Date:12ThursdayApril 2018Lecture
Memorial Ceremony for Holocaust Remembrance Day
More information Time 10:00 - 10:45Contact -
Date:12ThursdayApril 2018Colloquia
Jew Süss: Between Truth and Fiction
More information Time 11:15 - 12:30Location Edna and K.B. Weissman Building of Physical SciencesLecturer Yair Mintzker
PrincetonOrganizer Faculty of PhysicsContact Abstract Show full text abstract about Joseph Süss Oppenheimer—"Jew Süss"—is one of the m...» Joseph Süss Oppenheimer—"Jew Süss"—is one of the most iconic figures in the history of an-ti-Semitism. Originally from Heidelberg, in 1733 Oppenheimer became the "court Jew" of the duke of the small German state of Württemberg. When the duke died unexpectedly a few years later, the Württemberg authorities arrested Oppenheimer, put him on trial, and con-demned him to death for unspecified "misdeeds." On February 4, 1738, Oppenheimer was hanged in front of a large crowd just outside Stuttgart. It was one of the most sensational exe-cutions of the entire eighteenth century.
This lecture by Prof. Yair Mintzker (Princeton University) is based on his new book, “The Many Deaths of Jew Süss: The Notorious Trial and Execution of an Eighteen Century Court Jew” (Princeton UP, 2017). It will concentrate on the tension between the historical figure of “Jew Süss” as reflected in eighteenth-century sources on the one hand, and, on the other hand, the widespread and often cynical use of this figure in later works of fiction, chief among them the vicious Nazi propaganda movie "Jew Süss,” which was made in 1940 at the behest of Joseph Goebbels.
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Date:12ThursdayApril 2018Lecture
Identifying and targeting
More information Time 14:00 - 15:00Title Cancer Research Club SeminarLocation Max and Lillian Candiotty BuildingLecturer Prof. Eyal Gottlieb
The Ruth and Bruce Rappaport Faculty of Medicine,Technion - Israel Institute of Technology, HaifaOrganizer Department of Immunology and Regenerative BiologyContact -
Date:15SundayApril 2018Lecture
Understanding the response of the atmospheric circulation to climate change from an energetic perspective
More information Time 11:00 - 11:00Location Sussman Family Building for Environmental SciencesLecturer Orli Lachmy (The Open University of Israel), The Open University of Israel Organizer Department of Earth and Planetary SciencesContact Abstract Show full text abstract about The atmospheric circulation determines the structure of Eart...» The atmospheric circulation determines the structure of Earth’s climate. Changes in the circulation, such as meridional shifts in the circulation patterns can lead to dramatic changes in the local climate. Increased greenhouse gas emission is expected to change the vertical and meridional temperature profile and affect the atmospheric circulation. Climate models predict that greenhouse gas-induced climate change would cause a warming of the troposphere and cooling of the stratosphere, as well as a poleward and upward shift of the midlatitude jet stream and storm tracks - the major components of the extratropical circulation. The response of the atmospheric circulation to climate change is difficult to explain, due to nonlinear dynamical feedbacks within the system. Previous studies have attempted to explain the poleward shift of the jet stream in response to climate change based on different dynamical mechanisms. Here we propose an alternative approach of connecting the energy and momentum flux in order to explain the jet shift based on energy balance considerations.
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Date:15SundayApril 2018Lecture
Is mesoscopic resolution for BOLD fMRI enough? MR Imaging of electrical properties as a more direct probe of neuronal activation
More information Time 12:30 - 12:30Location Gerhard M.J. Schmidt Lecture HallLecturer Dr. Rita Schmidt
C.J. Gorter Center for High Field MRI, Leiden University Medical Center, Leiden, NetherlandsOrganizer Department of Brain SciencesContact Abstract Show full text abstract about Current state of the art ultra-high field MRI scanners have ...» Current state of the art ultra-high field MRI scanners have already achieved submillimeter resolution in 3D imaging of the human brain. Studies of the functional activity in the brain - by Blood Oxygen Level Dependent (BOLD) technique - have utilized this capability to observe mesoscopic (200-300µm) structures in humans. However, does BOLD tell us the full story? With current state of the art in mind, we are looking for the next step forward to better understand the brain physiology. I will share an on-going research on the mapping of electrical properties, aimed at studying functional activity in the human brain and offering a more direct probe of neuronal activity. The research includes a new computational technique for estimating electrical properties from an MR experiment, as well as the implementation of fast acquisition techniques. I will also show a correlation between changes in the electrical conductivity and basic activation paradigms (visual or motor) demonstrating faster response versus BOLD signal. -
Date:15SundayApril 2018Lecture
Molecular Genetics Departmental Seminars 2017-2018
More information Time 13:00 - 13:00Title Programmed cell death in early embryonic development: a myth or reality?Location Arthur and Rochelle Belfer Building for Biomedical ResearchLecturer Rivi Halimi Organizer Department of Molecular GeneticsContact -
Date:16MondayApril 2018Conference
Genome Evolution 2018
More information Time 08:00 - 16:15Location The David Lopatie Conference CentreChairperson Yitzhak Pilpel
