2017 research activities
Overview
The Department of Biological Regulation is comprised of approximately 170 people organized in 13 research groups. We are located in the Candiotty and Britannia buildings, which are equipped with all the facilities required for running an excellent research. Our research is concentrated on the regulation of processes responsible for the concerted action of cells, tissues, and organs. A diversity of methodologies and experimental approaches are used in order to tackle these issues. These include biochemical, molecular, physiological methods, organ and tissue cultures, and whole animal studies in mice, flies, and zebra fish. In addition, some of us are using systems biology, host-pathogen studies and a variety of imaging methods including biological magnetic resonance imaging (MRI) as well. Since de-regulation of such processes is a cause for many human diseases (cancer, heart failure, stroke, and abnormal growth, infertility, lack of regeneration after injury, etc.), we make an effort to use our results for the development of tools for early diagnosis and for the design of new drugs for pharmacological intervention.
The main projects that are currently performed in the department are:
Host-pathogen interactions - Dr. Roi Avraham
The control of reproduction - Prof. Emeritus Nava Dekel
Cell metabolism in health and disease - Dr. Ayelet Erez
Apoptosis Metabolism - Prof. Atan Gross
Protein degradation by the ubiquitin/proteasome system - Prof. Ami Navon
Vascularization during pregnancy and cancer development - Prof. Michal Neeman
ECM remodeling: from biophysical principles to drug design - Prof. Irit Sagi
Intracellular signaling cascades in health and disease - Prof. Rony Seger
Genome and epigenome regulation - Prof. Amos Tanay
lincRNA function - Dr. Igor Ulitsky
The development of the vascular system - Dr. Karina Yaniv
Growth factors and their receptors in cancer - Prof. Yossi Yarden
ScientistsShow details
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Dr. Avraham Roi
The lab of host-pathogen genomics is interested in how individual encounters between host and pathogenic bacteria can ultimately define the outcome of infection. This is achieved by applying cross-disciplinary single-cell analysis platforms that collectively enable us to extensively profile and precisely monitor host-pathogen interactions within the context of in vivo infections.The work in the lab centers on salmonella infection of mouse macrophages as a tractable in vitro host-pathogen system. We use this model to develop state of the art high throughput genomic tools and interdisciplinary approaches, and then apply them to various in vivo infection models to address critical biological aspects of host-pathogen biology.Using comprehensive, quantitative, unbiased tools to analyse the molecular interactions that underlie distinct host-pathogen subpopulations and their impact on disease outcome.Using a powerful combination of cutting-edge single cell genetic and genomic approaches, we wish to address what forms the basis for successful immune clearance, from the level of individual infected cells to that of the whole organism, and why, in some cases, sterilization is incomplete?
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Prof. Hadassa Degani
Perfusion and angiogensis in lung cancer: The role of the bronchial and pulmonary vascular network using Fluorescence and magnetic resonance imaging methodsMolecular magnetic resonance imaging of the estrogen receptorCollaboration with: Professors David Milstein and Joel Sussman, Weizmann InstituteSynthesis of new, high affinity ligands of the estrogen receptor as probes for molecular imagingStructuaral studies (x-ray crystalography and NMR) of the estrogen receptor - targeted ligands complexFunctional activities and molecular imaging of the new targeted ligands in estrogen receptor positive huaman breast cancer cellsMechanisms of lymphatic metastasis in breast cancer; In vivo fluorescence and magnetic resonanc imagingAdvanced non invasive MRI methods for breast cancer detection and diagnosis ; clinical investigationsCollaboration with: Dr. Myra Shapiro, Meir medical Center3D Tracking of the mammary tree using diffusion tensor magnetic resonance imagingAdvanced methods for analysis of dynamic contrast enhanced MRI based on a combined model free and model based method.Hyperpolarized magnetic resonance spectroscopy and imaging of cancer metabolism; searching for novel metabolic markers of cancerCollaboration with: Professor Lucio Frydman, Weizmann InstituteRenal function through sodium grandients; Non-invasive, high resolution sodium MRI.Collaboration with: Dr. Edna Haran, Weizmann InstituteEstrogen regulation of angiogenesis and perfusion of breast cancer; from molecular mechanisms to functional MRI of the microvascular physiology
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Prof. Nava Dekel
Molecular characterization of the ovulatory cascadeMechanisms involved in successful implantation.Regulation of the meiotic cell cycle: use of rodent oocytes as a model system.Cell-to-cell communication: regulation of expression, posttranslational modification, degradation and function of the gap junction proteins, Cx43 and Cx37.
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Dr. Erez Ayelet
Cancer Metabolic RewiringMetabolic regulation in the CNSMetabolic adaptations during inflammationMetabolism in senescence
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Prof. Atan Gross
Establishing the role of MTCH2/MIMP in mitochondrial metabolism and apoptosisEstablishing the role of the ATM-BID pathway in regulating the quiescence of haematopoietic stem cells
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Prof. Yoram Salomon
Anti-cancer treatments :Development of novel bacteriochlorophyll-based drugs for photochemotherapy.Boron neutron capture therapy.Reactive oxygen species, their generation by bacteriochlorophyll and light, their role in signal transduction and mechanisms of cell and tumor destruction.Vascular biology and vascular destruction.
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Prof. Rony Seger
The nuclear translocation of signaling protein as a drug target for cancer and inflammationThe nuclear translocation of ERKThe nuclear translocation of JNK and p38Develop peptide inhibitors of the nuclear translocation of ERK/JNK/p38 for the cure of cancer and inflammationDevelopment of small molecular weight inhibitors of the nuclear translocation of ERK for the cure of cancerThe subcellular localisation of AKTThe mechanisms and roles of MEK nuclear translocationERK1c in the regulation of Golgi fragmentationThe mechanisms of golgi translocation of ERK1cSubstrates of ERK1c in the GolgiMechanism of ERK1c-regulated Golgi architecture
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Prof. Alex Tsafriri
Molecular regulation of ovulatory changes in mammals.Collaboration with: Helena Ashkenazi, Shmulik Motola, Xiumei Cao, Malka Popliker, Seymour Pomerantz, Marco Conti, StanfordThe roles of gonadotropins and EGF-like factors in triggering ovulation.The resumption of meiosis and its regulation.Ovulation as a tissue remodeling process.The development and demise of ovarian follicles <I>in vivo</I> and <I>in vitro</I>: the role of apoptosis.Collaboration with: Atan Gross, KerenYacobi
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Dr. Igor Ulitsky
Roles of long noncoding RNAs in gene regulationFunctions of long noncoding RNAs in establishing cell identifySequence determinants in long noncoding RNAsEvolution of intergenic regions in vertebratesSubcellular localization determinants in long RNAs
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Prof. Yosef Yarden
Epigenetics of growth factor action on taerget cellsCollaboration with: Prof. Moshe Szyf, MontrealRoles for growth factors in meatastasisCollaboration with: Prof. Eytan Ruppin (Tel Aviv University)
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