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June 06, 2016

  • Date:20TuesdayFebruary 2024

    The Genetics Society of Israel Annual Meeting

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    Time
    08:00 - 08:00
    Location
    The David Lopatie Conference Centre
    Chairperson
    Efrat Shema
    Conference
  • Date:20TuesdayFebruary 2024

    Mapping the world around us: A topology-preserved schema of space that supports goal-directed navigation

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    Time
    12:30 - 12:30
    Location
    Gerhard M.J. Schmidt Lecture Hall
    LecturerDr. Raunak Basu
    Edmond and Lily Safra Center for Brain Sciences The Hebrew University of Jerusalem
    Organizer
    Department of Brain Sciences
    Contact
    AbstractShow full text abstract about Successful goal-directed navigation requires estimating one’...»
    Successful goal-directed navigation requires estimating one’s current position in the environment, representing the future goal location, and maintaining a map that preserves the topological relationship between positions. In addition, we often need to implement similar navigational strategies in a continuously changing environment, thereby necessitating certain invariance in the underlying spatial maps. Previous research has identified neurons in the hippocampus and parahippocampal cortices that fire specifically when an animal visits a particular location, implying the presence of a spatial map in the brain. However, this map largely encodes the current position of an animal and is context-dependent, whereby changing the room or shape of the arena results in a new map orthogonal to the previous one. These observations raise the question, are there other spatial maps that fulfill the cognitive requirements necessary for goal-directed navigation?
    Using a goal-directed navigation task with multiple reward locations, we observed that neurons in the orbitofrontal cortex (OFC) exhibit distinct firing patterns depending on the goal location, and this goal-specific OFC activity originates even before the onset of the journey. Further, the difference in the ensemble firing patterns representing two target locations is proportional to the physical distance between these locations, implying the preservation of spatial topology. Finally, carrying out the task across different spatial contexts revealed that the mapping of target locations in the OFC is largely preserved and that the maps formed in two different contexts occupy similar neural subspaces and could be aligned by a linear transformation. Taken together, the OFC forms a topology-preserved schema of spatial locations that is used to represent the future spatial goal, making it a potentially crucial brain region for planning context-invariant goal-directed navigational strategies.
    Lecture
  • Date:20TuesdayFebruary 2024

    Principles of protein-protein interactions in 11 years of lab-evolution

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    Time
    14:00 - 15:00
    Location
    Gerhard M.J. Schmidt Lecture Hall
    LecturerProf. Emmanuel Levy
    Dept. of Chemical and Structural Biology Weizmann Institute
    Organizer
    Department of Chemical and Structural Biology
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    Lecture
  • Date:21WednesdayFebruary 2024

    Machine Learning and Statistics Seminar

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    Time
    14:00 - 15:00
    Title
    Fundamental Problems in AI: Transferability, Compressibility and Generalization
    LecturerTomer Galanti
    MIT
    Organizer
    Department of Computer Science and Applied Mathematics
    Homepage
    Contact
    AbstractShow full text abstract about In this talk, we delve into several fundamental questions in...»
    In this talk, we delve into several fundamental questions in deep learning. We start by addressing the question, "What are good representations of data?" Recent studies have shown that the representations learned by a single classifier over multiple classes can be easily adapted to new classes with very few samples. We offer a compelling explanation for this behavior by drawing a relationship between transferability and an emergent property known as neural collapse. Later, we explore why certain architectures, such as convolutional networks, outperform fully-connected networks, providing theoretical support for how their inherent sparsity aids learning with fewer samples. Lastly, I present recent findings on how training hyperparameters implicitly control the ranks of weight matrices, consequently affecting the model's compressibility and the dimensionality of the learned features.

    Additionally, I will describe how this research integrates into a broader research program where I aim to develop realistic models of contemporary learning settings to guide practices in deep learning and artificial intelligence. Utilizing both theory and experiments, I study fundamental questions in the field of deep learning, including why certain architectural choices improve performance or convergence rates, when transfer learning and self-supervised learning work, and what kinds of data representations are learned in practical settings.
     

     
    Lecture
  • Date:22ThursdayFebruary 2024

    Vision and AI

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    Time
    12:15 - 13:15
    Title
    Extracting Multiple Concepts from a Single Image and Generating Consistent Characters
    Location
    Jacob Ziskind Building
    LecturerOmri Avrahami
    HUJI
    Organizer
    Department of Computer Science and Applied Mathematics
    Contact
    AbstractShow full text abstract about Text-to-image model personalization aims to introduce a user...»
    Text-to-image model personalization aims to introduce a user-provided concept to the model, allowing its synthesis in diverse contexts. However, current methods primarily focus on the case of learning a single concept from multiple images with variations in backgrounds and poses, and struggle when adapted to a different scenario. We introduce the task of textual scene decomposition: given a single image of a scene that may contain several concepts, we aim to extract a distinct text token for each concept, enabling fine-grained control over the generated scenes.

    Then, in the second part, we tackle the problem of of consistent characters generation, a crucial aspect for numerous real-world applications such as story visualization, game development, asset design, advertising, and more. Current methods typically rely on multiple pre-existing images of the target character or involve labor-intensive manual processes. We propose a fully automated solution for consistent character generation, with the sole input being a text prompt.

    Project Pages:

    https://omriavrahami.com/break-a-scene/

    https://omriavrahami.com/the-chosen-one/

    Bio: Omri is a PhD student at the School of Computer Science and Engineering at the Hebrew University of Jerusalem, under the joint supervision of Prof. Dani Lischinski and Dr. Ohad Fried, interested in developing new tools for content synthesis and editing.
    Lecture
  • Date:22ThursdayFebruary 2024

    Seminar for PhD thesis defense

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    Time
    14:00 - 14:00
    Title
    "Characterization of the Role of RNA G-Quadruplex Structures in Stress Granule Assembly"
    Location
    Arthur and Rochelle Belfer Building for Biomedical Research
    LecturerYehuda-Matan Danino
    Organizer
    Department of Molecular Genetics
    Contact
    Lecture
  • Date:22ThursdayFebruary 2024

    Targeting impaired RNA metabolism in age-dependent neurodegeneration

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    Time
    15:00 - 16:00
    Location
    Nella and Leon Benoziyo Building for Biological Sciences
    LecturerDr. Zeev Melamed
    Department of Medical Neurobiology (HUJI)
    Organizer
    Department of Biomolecular Sciences
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    Lecture
  • Date:25SundayFebruary 2024

    Seminar for PhD thesis defense

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    Time
    10:00 - 11:00
    Title
    Reconstituting Mouse Embryogenesis Ex Utero in Natural and Stem Cell-Derived Embryos
    Location
    The David Lopatie Hall of Graduate Studies
    LecturerAlejandro Aguilera Castrejon
    Organizer
    Department of Molecular Genetics
    Contact
    Lecture
  • Date:25SundayFebruary 2024

    EPS Departmental Seminar; Challenges and opportunities in global storm resolving climate models

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    Time
    11:00 - 11:00
    Location
    Sussman Family Building for Environmental Sciences
    LecturerDr. Ilai Guendelman
    Princeton University
    Organizer
    Department of Earth and Planetary Sciences
    Contact
    Lecture
  • Date:25SundayFebruary 2024

    The Clore Center for Biological Physics

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    Time
    13:15 - 14:30
    Title
    Tails and (boson) peaks in the glassy vibrational density of states
    Location
    Nella and Leon Benoziyo Physics Library
    LecturerAvraham Moriel
    Princeton University - The Department of Mechanical and Aerospace Engineering
    Organizer
    Clore Center for Biological Physics
    Contact
    AbstractShow full text abstract about Due to their intrinsic nonequilibrium and disordered natur...»

    Due to their intrinsic nonequilibrium and disordered nature, glasses feature low-frequency, nonphononic vibrations, in addition to phonons. These excess modes generate a peak —the boson peak— in the ratio of the vibrational density of state (VDoS) and Debye’s VDoS of phonons. Yet, the excess vibrations and the boson peak are not fully understood. After presenting the experimental evidence of the boson peak, we will discuss additional universal characteristics of glassy low frequency VDoS obtained through numerical simulations. We will then examine a recently analyzed mean-field model capturing the universal low-frequency glassy VDoS characteristics. Combining reanalyzed experimental data and computer simulations, we will observe that the same mean-field model also captures the origin, nature and properties of the boson peak, yielding a unified physical picture of the low-frequency VDoS spectra of glasses.

    FOR THE LATEST UPDATES AND CONTENT ON SOFT MATTER AND BIOLOGICAL PHYSICS AT THE WEIZMANN, VISIT OUR WEBSITE: https://www.biosoftweizmann.com/

    Lecture
  • Date:26MondayFebruary 2024

    PhD Thesis Defense by Marko Dunjic (Dr. Yonatan Stelzer Lab)

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    Time
    14:00 - 16:00
    Title
    Histone Exchange Mechanisms Of Epigenetic Regulation In Pluripotency And Cell Commitment
    Location
    Ullmann Building of Life Sciences
    LecturerMarko Dunjic
    Dr. Yonatan Stelzer Lab
    Organizer
    Department of Molecular Cell Biology
    Contact
    Lecture
  • Date:26MondayFebruary 2024

    EPS AI discussion seminar - Towards a Unified Conversational Model for Remote Sensing Imagery

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    Time
    15:00 - 15:00
    Location
    Sussman Family Building for Environmental Sciences
    LecturerSalman Khan (MBZUAI)
    Organizer
    Department of Earth and Planetary Sciences
    Contact
    Lecture
  • Date:28WednesdayFebruary 2024

    Immunology and Regenerative Biology Colloquium

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    Time
    11:00 - 12:00
    Title
    Multi-Potent Lung Stem Cells for Lung Regeneration
    Location
    Max and Lillian Candiotty Building
    LecturerProf. Yair Reisner
    Professor Emeritus, Weizmann Institute of Science Head, Stem Cell Research at the Department of Stem Cell Transplantation & Cellular Therapy; MD Anderson Cancer Center; Houston, Texas
    Organizer
    Department of Immunology and Regenerative Biology
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    Lecture
  • Date:29ThursdayFebruary 2024

    Geometric Functional Analysis and Probability Seminar

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    Time
    13:30 - 14:30
    Title
    Towards a Floquet Theory for Periodic Jacobi Matrices on Trees
    Location
    Jacob Ziskind Building
    LecturerJonathan Breuer
    HUJI
    Organizer
    Department of Mathematics
    Contact
    AbstractShow full text abstract about Periodic Jacobi matrices on the line have a very rich spectr...»
    Periodic Jacobi matrices on the line have a very rich spectral theory, one of whose ingredients is the Floquet theory of eigenfunctions. In this talk we will discuss ongoing work that attempts to generalize this theory to more general trees. We will describe some results obtained in joint works with Jess Banks, Jorge Garza Vargas, Eyal Seelig and Barry Simon.
    Lecture
  • Date:29ThursdayFebruary 2024

    Highly multiplexed imaging of tissues with subcellular resolution by imaging mass cytometry

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    Time
    14:00 - 14:00
    LecturerProf. Bernd Bodenmiller
    Organizer
    Dwek Institute for Cancer Therapy Research
    Contact
    Lecture
  • Date:03SundayMarch 2024

    The Clore Center for Biological Physics

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    Time
    13:15 - 14:30
    Title
    A Statistical Physics Approach to Bacteria under Strong Perturbations
    Location
    Nella and Leon Benoziyo Physics Library
    LecturerProf. Nathalie Q. Balaban
    Racah Institute of Physics, The Hebrew University
    Organizer
    Clore Center for Biological Physics
    Contact
    AbstractShow full text abstract about Statistical physics successfully accounts for phenomena invo...»
    Statistical physics successfully accounts for phenomena involving a large number of components using a probabilistic approach with predictions for collective properties of the system. While biological cells contain a very large number of interacting components, (proteins, RNA molecules, metabolites, etc.), the cellular network is understood as a particular, highly specific, choice of interactions shaped by evolution, and therefore difficultly amenable to a statistical physics description. Here we show that when a cell encounters an acute but non-lethal stress, its perturbed state can be modelled as random network dynamics. Strong perturbations may therefore reveal the dynamics of the underlying network that are amenable to a statistical physics description. We show that our experimental measurements of the recovery dynamics of bacteria from a strong perturbation can be described in the framework of physical aging in disordered systems (Kaplan Y. et al, Nature 2021). Further experiments on gene expression confirm predictions of the model. The predictive description of cells under and after strong perturbations should lead to new ways to fight bacterial infections, as well as the relapse of cancer after treatment.
    Lecture
  • Date:03SundayMarch 2024

    The multimodal regulation of liver glucose metabolism

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    Time
    15:00 - 16:00
    Location
    Arthur and Rochelle Belfer Building for Biomedical Research
    LecturerDr. Kfir Sharabi
    The Institute of Biochemistry, Food Science, and Nutrition. The Robert H. Smith Faculty of Agriculture, Food and Environment. The hebrew University of Jerusalem.
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    Lecture
  • Date:04MondayMarch 2024

    Foundations of Computer Science Seminar

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    Time
    11:15 - 12:15
    Title
    Towards general-purpose program obfuscation via local mixing
    Location
    Jacob Ziskind Building
    LecturerRan Canetti
    Boston University
    Organizer
    Department of Computer Science and Applied Mathematics
    Contact
    AbstractShow full text abstract about We explore the possibility of obtaining general-purpose prog...»
    We explore the possibility of obtaining general-purpose program obfuscation for all circuits by way of making only simple, local, functionality-preserving random perturbations in the circuit structure. Towards this goal, we use the additional structure provided by reversible circuits,  but no additional algebraic structure.


    We start by formulating a new (and relatively weak) obfuscation task regarding the ability to obfuscate  random circuits of  bounded length.  We call such obfuscators  Random Input
    Lecture
  • Date:05TuesdayMarch 2024

    50 Shades of Molecular Modeling in Biomolecular Sciences

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    Time
    10:00 - 11:00
    Location
    Nella and Leon Benoziyo Building for Biological Sciences
    LecturerDr. Sofya Lushchekina
    Dr. Sofya Lushchekina, Dept. of Brain Sciences, Weizmann Institute of Science
    Organizer
    Department of Biomolecular Sciences
    Contact
    AbstractShow full text abstract about The presentation will cover a spectrum of current applicatio...»
    The presentation will cover a spectrum of current applications of atomistic molecular modeling methods in biomolecular problems. Examples of applications of molecular docking, molecular dynamics, combined quantum mechanics/molecular mechanics and dynamics methods, enhanced sampling, and coarse-graining methods, recent machine learning protein structure prediction methods for studying protein structure and dynamics, protein-ligand and protein-protein interactions, and mechanisms of enzymatic reactions will be considered. The advantages and limitations of different computational methods will be discussed.

    Lecture
  • Date:05TuesdayMarch 2024

    Machine learning for protein functional site annotation and peptide binder design

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    Time
    14:00 - 15:00
    Location
    Gerhard M.J. Schmidt Lecture Hall
    LecturerDr. Jerome Tubiana
    Blavatnik School of Computer Science, Tel Aviv University
    Organizer
    Department of Chemical and Structural Biology
    Contact
    Lecture

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