Department of Plant and Environmental Sciences

Head Prof. Yuval Eshed

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Head

Prof. Yuval Eshed

Office +972-8-934-3693

Overview

Plants offer the world its only renewable resource of foods, alternative energy and biotherapeutic compounds. Plants have highly sophisticated short and long-term adaptive mechanisms to the environment as a result of the simple fact that they cannot alter their location during environmental change. Basic understanding of how plants react to the environment and why they grow the way they do are central to devising a rational approach to address three important global challenges, namely to secure more and healthier food, to develop novel plant-based products associated with biotherapeutics and to produce alternative energy resources in the form of biofuels. Research activities in the Department of Plant Sciences are associated with all of the above-mentioned global challenges and range from studies on the function and regulation of isolated genes to their interactive behavior in the context of the whole plant. We have developed extensive in-house genomic, bioinformatics and transgenic infrastructure that enables us to isolate novel genes by gene trapping, knockout or map-based cloning. Cloned genes are manipulated and studied by transgenic analysis to establish their potential in the whole plant. Our research as listed below integrates methodologies of molecular biology, protein modeling, genomics, metabolomics, bioinformatics, system biology, genetics, biochemistry and physiology.
Harnessing light energy and energy transduction in the plant cell: Research is carried out on the basic biophysical phenomenon of photon absorption by chlorophyll through transduction of this energy to ATP and the regulation of energy flux by the plant redox state.
Adaptive response in the plant to the biotic and abiotic environment: Molecular mechanisms that drive the cellular response are investigated under environmental perturbation. Research is directed in understanding the elements that play a role in the recognition of pathogens and the subsequent mounting of plant defense responses as well as in the response of plants to abiotic stresses, such as salt stress.
Plant metabolism and growth: Research is centered around elucidating regulatory metabolic networks for production of essential primary and secondary metabolites as well as understanding gene expression and hormonal networks that control plant metabolism, growth, reproduction and productivity.
Plant genome organization: Molecular tools have been developed to examine the fluidity of the plant genome, as described by transposon element, and the evolution of polyploid plants.

Department of Physics of Complex Systems

Head Prof. Dan Oron

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Head

Prof. Dan Oron

Office +972-8-934-6282

Overview

The Department of Physics of Complex Systems has research programs in fundamental and applied physics. Research in optics and atomic physics includes nonlinear optics, ultra fast optics and high harmonic generation, quantum optics, slow light, descrete optics, nano optics and nonlinear microscopy, laser cooling and trapping of atoms and ions, studies of Bose Einstein condensation, precision spectroscopy and quantum information processing. Theoretical and experimental research in soft condensed matter is concentrated on equilibrium and non-equilibrium statistical physics, clustering of data, bioinformatics and systems biology, electrokinetics of ions and charged particles in low dielectric liquids, colloids, soft materials and complex fluids. Experimental and theoretical hydrodynamics concentrates on turbulence, spatio-temporal chaos, turbulent Rayleigh-Benard convection, liquids at interfaces, droplet impact, sedimentation and dynamics of single micro-objects, such as polymers, vesicles, capsules and hydrodynamics of their solutions. Turbulence theory is developed in general and in applications to cloud physics. Classical and quantum chaos, statistics of nodal lines in quantum systems and turbulence are studied theoretically. Mathematical and computational methods for archaeological research are developed. Theoretical physical biology deals with modeling living information systems, their molecular components and the way they evolve. Experimental bio-physics deals with bio-molecules, neural cultures, neurophysics, physics of the brain, physics of bio-systems and decision making in ant colonies.

Department of Particle Physics and Astrophysics

Head Prof. Tal Alexander

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Head

Prof. Tal Alexander

Office +972-8-934-4483

Overview

The Department of Particle Physics and Astrophysics is engaged in both experimental and theoretical research, in various directions. These include elementary particle physics, field theory, string theory, theoretical astrophysics, observational astrophysics, particle astrophysics, relativistic heavy ion physics, molecular physics, nuclear physics, plasma physics, and radiation detection physics.

Department of Organic Chemistry

Head Prof. Milko van der Boom

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Head

Prof. Milko van der Boom

Office +972-8-934-2515

Overview

The areas of research in the Department of Organic Chemistry include synthetic and mechanistic organic and organometallic chemistry, novel reactions for organic synthesis, bond activation by metal complexes, polymeric reagents and catalysis. Bioorganic chemistry includes the studies of plant antiviral agents, the molecular mechanism of action of rhodopsin, artificial ion carriers and molecular sensors. Biological chemistry includes studies on structure,function, and mode of action of biologically active peptides and proteins; thermophilic enzymes; enzymes involved in DNA repair, DNA and RNA processing; studies of ordered, compact states of nucleic acids; and biomedical applications of EPR and NMR. Computational chemistry deals with the prediction of molecular properties by first principles (ab initio) and semiempirical quantum mechanical calculations..

Department of Neurobiology

Head Prof. Alon Chen

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Head

Prof. Alon Chen

Office +972-8-934-4490

Overview

Research in Neuroscience in the Department of Neurobiology encompasses a wide variety of subjects, in areas including cellular and molecular biology, neuroanatomy, functional magnetic resonance imaging (fMRI), physiology, pharmacology, psychophysics, and computational sciences.

Basically, the research of the various groups of the Department covers, among others, the following topics:

  • Analysis of the molecular and cellular basis of neuronal and synaptic function.
  • Imaging of neuronal activity underlying higher brain functions.
  • Tracing and characterization of neuronal communication profiles.
  • Characterization of the CNS response to trauma and lesion; developing molecular and cellular therapeutic agents.
  • Determination of the underlying processes and mechanisms of vision, perception, learning, and memory in behaving rodents and primates.
  • Computer modeling of brain function.

At the Neurobiology Department, the structure, function, development, and plasticity of the nervous system are studied at various levels of analysis, using different types of cell and experimental animal models. The groups studying neuronal function at the molecular and cellular levels use in vitro systems ranging from non-neuronal and neuronal cell lines to primary neuronal and glial cells of cerebellar, hippocampal and cortical origin. In many cases, the cells studied are transfected with genes of interest. These cell systems allow the study of the roles of various components of the nervous system, including cell surface membrane components, specific enzymes, neurotransmitters, neuromodulators, growth factors, neuroreceptors, lipid components, ionic channels and cytoskeletal constituents. Algorithms for the synaptic plasticity between neurons, and the role of dendritic ion channels in synaptic input and information processing, are also being studied. Injury models of nerve lesion and oxidative stress paradigms are applied to examine the principles of CNS regeneration, rescue from ischemia and stroke, and apoptotic cell death and senescence.

The groups studying the CNS at the system level are striving to understand the complex neuronal mechanisms underlying learning, memory, and sensory processing (vision, taste, smell), and to determine the relationship between brain and mind. Using track tracing methods, the rules governing the interconnections in the visual cortex are being unraveled. Behavioral studies focus on principles of learning and consolidation, cortical information processing, learning disabilities, and addiction. Functional brain imaging of the human visual cortex is being studied by various techniques, including fMRI. Psychophysical approaches are being used to define processes involved in image segmentation, learning and memory skill acquisition, motor control, and language. Nearly 20 groups of researchers carry out both independent studies and collaborative research with colleagues from within the Department and outside it.

Department of Molecular Genetics

Head Prof. Naama Barkai

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Head

Prof. Naama Barkai

Office +972-8-934-4429

Overview

The molecular basis of genetics and related biological processes are under investigation in our Department. The investigators approach these processes from the most reduced and reconstructed systems up to more systemic and computational analysis. Different organisms are employed including virus, yeast, Drosophila, mouse and human. These animal models and cell culture systems are used to study the mechanisms of;
a. Basic processes in gene expression, such as transcription, translation and protein degradation.
b. Cellular responses to various stimuli, such as cytokines, growth factors and exposure to DNA-damage.
c. Regulation of cell growth, senescence, differentiation and death.
d. Development; Mechanistic view of zygote to embryo transition and development of various organs, such as brain, muscles, bones and pancreas.
e. Genetic and acquired diseases such as cancer and virus infection. Embryonic stem cell biology, early development and advance human disease modeling.
f. Study of pluripotent stem cell biology and epigenetic reprogramming.
g. Computational and system biology. The function/evolution of genes and their diversification.

Department of Molecular Cell Biology

Head Prof. Eldad Tzahor

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Head

Prof. Eldad Tzahor

Office +972-8-934-3715

Overview

The molecular mechanisms underlying cell structures, dynamics and fate, and their involvement in embryonic development and cancer are among the primary topics of interest of the Department. These include studies on the mode of action of growth factors and the nature of signals triggered by them in target cells following binding to specific surface receptors. Growth regulation is also approached through the study of suppressor genes encoding such proteins as p53, which inhibit proliferation and drive cells towards differentiation or apoptosis. These studies, focusing on the mechanisms stimulate cell proliferation, differentiation, or death, can elucidate the basis for cancerous transformation in a large variety of systems. Overproduction or hyperactivation of growth-promoting systems was shown to have an oncogenic (cancer-causing) effect, and a similar process may be induced when growth-suppressor or apoptosis-inducing genes fail to function. The levels at which cell structure, activity and fate are studied in this department and the focus of these studies are many and diverse, including the characterization of soluble growth factors and their receptors, the nature of complex signal transduction pathways, the action of specific regulators of cytokine action, rearrangement of genes associated with oncogenic processes, and the properties of tumor suppressor and apoptosis promoting genes. Since such processes involve networks of interacting factors, we are also interested in mathematical modeling and computerized analysis of biological gene circuits.

In addition, there is broad interest in the molecular mechanisms of cell adhesion and their involvement in the regulation of cell fate. These studies include characterization of the basic rules underlying adhesive interactions, the binding of surface-associated adhesion molecules with the cytoskeleton, and the nature of growth- and differentiation-promoting signals triggered by adhesive interactions. Of special interest are proteins such as β-catenin, which play a crucial role in reinforcing cell-cell adhesions as well as triggering gene expression.

Department of Mathematics

Head Prof. Omri Sarig

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Head

Prof. Omri Sarig

Office +972-8-934-4305

Overview

The principal research interests of the department lie in the broadly understood areas of analysis, probability, algebra, and geometry.

Topics covered in Analysis include operator and matrix theory, spectral theory, linear and nonlinear ordinary and partial differential equations, functional and harmonic analysis, ergodic theory and dynamical systems, control theory in its various manifestations, optimization, game theory, approximation and complexity of functions, numerical analysis, singularity theory and robotics.

Research in Probability theory covers random walks and graphs, motion in random media, percolation, random matrices, Gaussian fields and other probabilistic models in mathematical physics.

Areas of Geometric research include the structure of finite and infinite dimensional spaces, analytic, real algebraic and semi-algebraic geometry, typology of foliations and complex vector fields.

The Algebraic direction includes some aspects of algebraic geometry, geometric group theory, Lie Theory, representation theory, quantum groups, number theory, automorphic forms, ring theory, statistics of Young diagrams, algebraic combinatorics and enveloping algebras, invariants and crystals.

For the research done at our sister department, the Department of Scomputer Science and Applied Mathematics, see here.

Department of Materials and Interfaces

Head Prof. Leeor Kronik

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Head

Prof. Leeor Kronik

Office +972-8-934-4993

Overview

Activities in the Department span a wide range of topics from soft, composite and hard materials to energy research, nanoscience, and biological materials. A unifying theme is the study of material functionality and its relation to fundamental properties at multiple scales. These properties may be mechanical, structural, chemical, electronic, magnetic, optical, and more. Some examples are:

How do shapes and sizes of nm-sized particles affect their properties?

How can we tune the properties of solar cells by manipulating their material interfaces?

How does friction in knee and hip joints depend on polyelectrolytes that lubricate them?

How can we design self-assembling (bio)chemical systems?

 

THE RESEARCH IS BASED ON AN INTERDISCIPLINARY APPROACH, and indeed the scientists bring complementary experience in chemistry and physics, including theory and experiment.

Department of Immunology

Head Prof. Steffen Jung

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Head

Prof. Steffen Jung

Office +972-8-934-2787

Overview

Research topics of our Department span the wide range from basic mechanisms in the development, recognition, inter-cellular communication, trafficking, and effector functions of the immune system to the role of these processes in autoimmune disorders, allergies and cancer. Special attention is given to the studies of immunomodulation and immunotherapy of these diseases leading to the development of specific vaccines to viruses, parasites, cancer and autoimmune diseases. Specific projects include production of specific antibodies for targeting of drugs and effector lymphocytes; raising of catalytic antibodies; studies of the repertoire and specificity of the T-cell receptor in autoimmune models for multiple sclerosis, diabetes, arthritis, and myasthenia gravis; definition of antigen recognition and mode of action of killer lymphocytes in allograft and tumor rejection; understanding the developmental process of leukemias and treating them; use of cytokines for immunotherapy of metastases and immunomodulation of lymphocyte migration; immune cell adhesion and migration; the control of inflammatory processes; development of hematopoietic stem cells and T-cells activity during aging as well as understanding antigen recognition mechanisms by their receptors and its coupling to cellular response in mast cells as a model.

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