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March 25, 2015

  • Date:04ThursdayMay 2023

    Toward complete computational optimization of antibody

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    Time
    09:00 - 10:00
    Location
    Max and Lillian Candiotty Building
    Lecturerhosted by Dr. Ira Zaretsky, Ariel Tennenhouse
    Fleishman Lab, Department of Biomolecular Sciences hosted by Antibody Unit, LSCF
    Organizer
    Department of Life Sciences Core Facilities
    Contact
    Lecture
  • Date:04ThursdayMay 2023

    Physics Colloquium

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    Time
    11:00 - 12:30
    Title
    TBA...
    Location
    Edna and K.B. Weissman Building of Physical Sciences
    LecturerProf. Alberto Morpurgo
    Universite de Geneva
    Organizer
    Faculty of Physics
    Contact
    AbstractShow full text abstract about TBA.. ...»
    TBA..
    Colloquia
  • Date:04ThursdayMay 2023

    Vision and AI

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    Time
    12:15 - 13:15
    Title
    Matching 3D Point Clouds
    Location
    Jacob Ziskind Building
    LecturerShai Avidan
    TAU
    Organizer
    Department of Computer Science and Applied Mathematics
    Contact
    AbstractShow full text abstract about I will present three deep learning algorithms for registerin...»
    I will present three deep learning algorithms for registering 3D point clouds in different settings.
    The first is designed to find a rigid transformation between point clouds and is based on
    the concept of best buddies similarity. The second algorithm offers a fast method for non-rigid
    dense correspondence between point clouds based on structured shape construction.
    Finally, I extend the second algorithm to handle scene flow estimation that can be learned on a small amount
    of data without employing ground-truth flow supervision.
    Lecture
  • Date:04ThursdayMay 2023

    The mitochondrial gatekeeper VDAC1 as an emerging drug target for novel anti-cancer therapeutics

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    Time
    14:00 - 15:00
    Location
    Max and Lillian Candiotty Building
    LecturerProf. Varda Shoshan-Barmatz
    Department of Life Sciences and the National Institute for Biotechnology in the Negev, Ben-Gurion University of the Negev, Beer-Sheva
    Organizer
    Dwek Institute for Cancer Therapy Research
    Contact
    Lecture
  • Date:07SundayMay 202308MondayMay 2023

    Executive Board and committees meetings 2023

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    Time
    All day
    Location
    The David Lopatie Conference Centre
    Contact
    International Board
  • Date:07SundayMay 2023

    Determining the age of the Kalahari Group, Southern Africa, using complex solutions for cosmogenic isotope concentrations

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    Time
    11:00 - 12:00
    Location
    Sussman Family Building for Environmental Sciences
    LecturerAri Matmon
    The Hebrew university of Jerusalem
    Organizer
    Department of Earth and Planetary Sciences
    Contact
    Lecture
  • Date:07SundayMay 2023

    Master Defense Seminar

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    Time
    11:30 - 12:30
    Title
    Developing a New Computational Approach for Chemical Classification of Plant metabolites using Machine Learning
    Location
    Nella and Leon Benoziyo Building for Biological Sciences
    LecturerVictoria Poltorak
    Prof. Asaph Aharoni & Dr. David Zeevi Dept. of Plant and Environmental Sciences Weizmann Institute of Science
    Organizer
    Department of Plant and Environmental Sciences
    Contact
    Lecture
  • Date:07SundayMay 2023

    Campus as a Living Laboratory for Sustainability: Energy, Food, and Trash

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    Time
    13:00 - 14:00
    Title
    SAERI - Sustainability and Energy Research Initiative Seminar Series
    Location
    Nella and Leon Benoziyo Building for Biological Sciences
    LecturerProf. Catherine Middlecamp
    Nelson Institute for Environmental Studies University of Wisconsin- Madison, USA
    Organizer
    Weizmann School of Science
    Contact
    Lecture
  • Date:08MondayMay 2023

    Animal and Microbial Rhodopsins

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    Time
    11:00 - 12:15
    Location
    Gerhard M.J. Schmidt Lecture Hall
    LecturerProf. Hideki Kandori
    Department of Frontier Materials, Nagoya Institute of Technology, Japan
    Organizer
    Faculty of Chemistry
    Homepage
    Contact
    AbstractShow full text abstract about Rhodopsins are photoreceptive membrane proteins containing a...»
    Rhodopsins are photoreceptive membrane proteins containing a retinal chromophore in animals and microbes. Animal and microbial rhodopsins possess 11-cis and all-trans retinal, respectively, and undergo isomerization into all-trans and 13-cis retinal by light. While animal rhodopsins are G protein coupled receptors, the function of microbial rhodopsins is highly divergent, including light-driven ion pumps, light-gated ion channels, photosensors, and light-activated enzymes. Microbial rhodopsins have been the main tools in optogenetics.
    Function of rhodopsins starts in 10-15 sec, and activation of rhodopsins occurs in the protein environment that has been optimized during evolution (1015 sec). We thus need various methods to understand these events of 30 orders of magnitude in time. We have studied molecular mechanism of rhodopsins by use of spectroscopic methods. Using ultrafast spectroscopy, we showed the primary event in our vision being retinal photoisomerization. In rhodopsins, photoisomerization of retinal, the shape-changing reaction, occurs even at 77 K. Using low-temperature infrared spectroscopy, we detected protein-bound water molecules of rhodopsins before X-ray crystallography. Detailed vibrational analysis provided structural information such as our color discrimination mechanism.
    I will talk about our spectroscopic study of animal and microbial rhodopsins. Recent unexpected findings such as unusual isomerization pathways and temperature effects are also presented.
    Colloquia
  • Date:08MondayMay 2023

    Foundations of Computer Science Seminar

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    Time
    11:15 - 12:45
    Title
    A distribution testing oracle separation between QMA and QCMA
    Location
    Jacob Ziskind Building
    LecturerChinmay Nirkhe
    IBM Watson
    Organizer
    Department of Computer Science and Applied Mathematics
    Contact
    AbstractShow full text abstract about It is long-standing open question in quantum complexity theo...»
    It is long-standing open question in quantum complexity theory whether the definition of non-deterministic quantum computation requires quantum witnesses (QMA) or if classical witnesses suffice (QCMA). We make progress on this question by constructing a randomized classical oracle separating the respective computational complexity classes. Previous separations [Aaronson-Kuperberg (CCC'07), Fefferman-Kimmel (MFCS'18)] required a quantum unitary oracle. The separating problem is deciding whether a distribution supported on regular un-directed graphs either consists of multiple connected components (yes instance) or consists of one expanding connected component (no instances) where the graph is given in an adjacency-list format by the oracle. Therefore, the oracle is a distribution over n-bit boolean functions.
    Lecture
  • Date:09TuesdayMay 202310WednesdayMay 2023

    Mechanobiology: Bridging biology and the physical sciences

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    Time
    08:00 - 08:00
    Chairperson
    Samuel Safran
    Homepage
    Conference
  • Date:09TuesdayMay 2023

    The unique life of the intrinsically disordered proteins (IDPs)

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    Time
    10:00 - 11:00
    Location
    Nella and Leon Benoziyo Building for Biological Sciences
    LecturerProf. Yosef Shaul
    Dept. of Molecular Genetics - WIS
    Organizer
    Department of Biomolecular Sciences
    Contact
    AbstractShow full text abstract about Over 20% of our proteins are intrinsically disordered (IDP/I...»
    Over 20% of our proteins are intrinsically disordered (IDP/IDR). IDPs/IDRs regulate many aspects of the living cells. They are generally highly dynamic, modifiable, adaptable, and short-lived proteins. We have previously reported that IDPs/IDRs undergoing proteasomal degradation via 26S and 20S proteasomes, the latter in a ubiquitin-independent manner. In this seminar, I will show data on the mechanisms of their 20S-mediated degradation in vitro and in the cells. Using proteomic approaches, we have identified many IDPs/IDRs undergoing 20S proteasomal degradation, all bearing unique structural features shared by liquid-liquid phase separation (LLPS) proteins. Proteasomal live imaging further highlighted the intracellular proteasomal dynamics and LLPS formation.

    Lecture
  • Date:09TuesdayMay 2023

    Physics Colloquium

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    Time
    11:00 - 12:30
    Title
    Intense Laser-Material Interactions: Stars, Exoplanets, and Unique States of Matter in the Laboratory
    Location
    Edna and K.B. Weissman Building of Physical Sciences
    LecturerProf. Christopher Deeney
    University of Rochester Laboratory for Laser Energetics
    Organizer
    Faculty of Physics
    Contact
    AbstractShow full text abstract about Since 1970, the University of Rochester and other laboratori...»
    Since 1970, the University of Rochester and other laboratories around the world have
    built more energetic and more powerful lasers. These technology advances have enabled new
    science regimes. Fifty years later, fusion ignition has been achieved in the laboratory ,
    where more energy than the laser energy was released ; an amazing demonstration of precision
    science under extreme conditions.Astrophysics is now a laboratory science-new equations of
    state, constitutive properties and structures are measured at conditions equivalent to giant gas
    planets and super earths. Ultrashort pulse lasers, a LLE invention acknowledged in the 2018
    Nobel Prize for Physics, is enabling ultrahigh field physics and new generations of particle
    accelerators and light sources. Recent progress on ignition, high-energy-density science and
    short-pulse laser physics will be summarized. The pursuit of direct-drive fusion and the path
    to 25 Petawatt lasers will be discussed.
    Colloquia
  • Date:09TuesdayMay 2023

    Deciphering microbial gene functions: insights from large-scale (meta)genomics

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    Time
    11:30 - 12:30
    Location
    Nella and Leon Benoziyo Building for Biological Sciences
    LecturerDr. David Burstein
    School of Molecular Cell Biology and Biotechnology, Tel-Aviv University
    Organizer
    Department of Plant and Environmental Sciences
    Contact
    Lecture
  • Date:10WednesdayMay 2023

    An Innate Immunity Pathway Against Invading Microbes Targets the Paternal Mitochondria for Destruction after Fertilization

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    Time
    10:00 - 11:15
    Location
    Arthur and Rochelle Belfer Building for Biomedical Research
    LecturerProf. Eli Arama
    Dept of Molecular Genetics, WIS
    Organizer
    Department of Brain Sciences
    Contact
    Lecture
  • Date:10WednesdayMay 2023

    "Simulations for materials in energy"

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    Time
    11:00 - 12:00
    Location
    Gerhard M.J. Schmidt Lecture Hall
    LecturerProf. Nuria Lopez
    Institute of Chemical Research of Catalonia (ICIQ)
    Organizer
    Department of Molecular Chemistry and Materials Science
    Contact
    AbstractShow full text abstract about Finding new materials for the conversion of CO2 into useful ...»
    Finding new materials for the conversion of CO2 into useful products is a complex
    task. Simulations can provide mechanistic and stability insights trying to accelerate
    the process. In my talk I will present the different degrees of complexity that we
    try to address in the simulations and which are the major challenges in the field.
    Lecture
  • Date:10WednesdayMay 2023

    Human hematopoietic stem cells as sensors of inflammatory memory

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    Time
    11:00 - 12:00
    Location
    Max and Lillian Candiotty Building
    LecturerProf. Stephanie Z. Xie
    Princess Margaret Cancer Centre, University Health Network, Toronto, ON, Canada
    Organizer
    Department of Immunology and Regenerative Biology
    Contact
    Lecture
  • Date:10WednesdayMay 2023

    Physics Colloquium

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    Time
    11:15 - 12:00
    Title
    GW astrophysics with LIGO/VIRGO data
    Location
    Edna and K.B. Weissman Building of Physical Sciences
    LecturerMatias Zaldarriaga
    Institute for Advanced Study Princeton, NJ
    Organizer
    Faculty of Physics
    Contact
    AbstractShow full text abstract about I will describe some of our recent work re-analyzing the gra...»
    I will describe some of our recent work re-analyzing the gravitational wave data made public by the LIGO collaboration. More broadly I will discuss some of the outstanding questions related to binary black hole mergers and what the data might be saying about how the GW sources formed. I will comment on some fruitful directions for further improvements.
    Colloquia
  • Date:10WednesdayMay 2023

    Machine Learning and Statistics Seminar

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    Time
    11:15 - 12:30
    Title
    Causal inference with misspecified interference structure
    Location
    Jacob Ziskind Building
    LecturerDaniel Nevo
    Tel-Aviv University
    Organizer
    Department of Computer Science and Applied Mathematics
    Contact
    AbstractShow full text abstract about The typical approach towards drawing causal conclusions from...»
    The typical approach towards drawing causal conclusions from observed data starts by defining a causal estimand, for example in terms of potential outcomes or the so-called do operator, and continues by providing conditions for identification of this estimand from the data, followed by statistical estimation and inference. One of the main assumptions is the no-interference assumption, meaning that the treatment assigned to one unit does not affect other units in the sample. However, in many domains such as in the social sciences and infectious disease epidemiology, this assumption is implausible in practice due to social interactions.
    As an alternative to the no-interference assumption, an interference structure is often represented using a network. Ubiquitously, the network structure is assumed to be known and correctly specified. Nevertheless, correctly encoding the interference structure in a network can be challenging. For example, people may misreport their social connections, or report connections irrelevant to the specific combination of treatment and outcome.
    Building on the exposure mapping framework, we derive the bias arising from estimating causal effects under a misspecified interference structure. To address this problem, we propose a novel estimator that uses multiple networks simultaneously and is unbiased if one of the networks correctly represents the interference structure, thus providing robustness to the network specification. Additionally, we propose a sensitivity analysis that quantifies the impact of a postulated misspecification mechanism on the causal estimates. Through simulation studies, we illustrate the bias from assuming an incorrect network and show the bias-variance tradeoff of our proposed network-misspecification-robust estimator. We further demonstrate the utility of our methods in two real examples.
    Joint work with Bar Weinstein
    Lecture
  • Date:10WednesdayMay 2023

    Smell and our unconscious sense of self

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    Time
    13:00 - 14:00
    Location
    Arthur and Rochelle Belfer Building for Biomedical Research
    LecturerProf. Benjamin D. Young
    Institute for Neuroscience University of Nevada, Reno
    Organizer
    Department of Brain Sciences
    Contact
    AbstractShow full text abstract about Benjamin D. Young Ph.D. is an associate professor in philoso...»
    Benjamin D. Young Ph.D. is an associate professor in philosophy and interdisciplinary neuroscience at the University of Nevada, Reno. Previously he held a Kreitman Post-Doctoral Fellowship in the Department of Brain and Cognitive Sciences at Ben-Gurion University, as well as Visiting Assistant Professorship and Post-Doctoral Fellowship in the Department of Cognitive Science at Hebrew University. He conducts empirically informed philosophical research with a particular emphasis on olfaction focusing on non-conceptual content, qualitative consciousness in the absence of awareness, and the perceptible objects of smell. His most recent projects include co-editing the textbook Mind, Cognition, and Neuroscience and the collection Theoretical Perspectives on Smell. Ben is finishing a book on smell tentatively titled Stinking Philosophy! and beginning to work on a book about the unconscious mind. Previously he showed how olfaction calls into question the general neuroscientific theories of consciousness and the relationship between access and phenomenal consciousness. Dr. Young’s current research extends this framework and examines the role that smell plays in allowing us to recognize our embodied material composition and what we can perceive about others from their smell both with and without subjective awareness.
    For more information about Ben’s research see
    https://www.unr.edu/philosophy/faculty-staff/benjamin-young
    Lecture

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