Pages
September 01, 2016
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Date:26TuesdayMarch 2019Lecture
Kaluza – flow cytometry analysis software
More information Time 10:15 - 13:15Location Max and Lillian Candiotty BuildingLecturer Shlomit Rak-Yahalom Rhenium Organizer Department of Life Sciences Core FacilitiesContact -
Date:26TuesdayMarch 2019Lecture
How transcription regulates mRNA stability and why it helps cells to survive stress.
More information Time 10:30 - 11:00Location Nella and Leon Benoziyo Building for Biological SciencesLecturer Dr. Boris Slobodin
Department of Biomolecular Sciences-WISOrganizer Department of Biomolecular SciencesContact Abstract Show full text abstract about Stability of mRNA molecules is generally considered to be an...» Stability of mRNA molecules is generally considered to be an intrinsic and constant feature of every distinct transcript. This study investigated the effect of transcription on the stabilities of multiple human and mouse mRNAs. We found that transcription positively regulates mRNA stability, rendering efficiently transcribed messengers less prone to degradation. Being independent of either translation or expression levels, this phenomenon is based exclusively on the co-transcriptionally deposited m6A modification, length of poly(A) tails, and the preferential activity of the CCR4-Not complex toward m6A-marked transcripts. Moreover, we demonstrate that upon large-scale transcriptional changes, such as during stress response or differentiation, the cell dynamically regulates its degradation machinery to buffer the global levels of mRNAs. We found this phenomenon to affect stabilities of virtually all tested mRNAs, thus providing transcription an additional regulatory pathway to globally impact mRNA stability. Overall, we conclude that transcription is a primary regulator of mRNA degradation in eukaryotic cells. We postulate that mRNA stability is a flexible epigenetic feature that is continuously and dynamically adjusted to transcriptional fluctuations in order to fine-tune gene expression in the ever-changing conditions.
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Date:26TuesdayMarch 2019Lecture
How to build a glass house - insights into the biomolecular machinery for silica morphogenesis in diatoms
More information Time 11:30 - 11:30Location Nella and Leon Benoziyo Building for Biological SciencesLecturer Prof. Nils Kroeger
B CUBE Center for Molecular Bioengineering Center for Molecular and Cellular Bioengineering (CMCB) TU Dresden, GermanyOrganizer Department of Plant and Environmental SciencesContact -
Date:26TuesdayMarch 2019Lecture
Department of Molecular Genetics seminar for thesis defense
More information Time 13:00 - 13:00Title “Is RPTPa a novel target that counteracts obesity?”Location Koshland RoomLecturer Yael Cohen Sharir Organizer Department of Molecular GeneticsContact -
Date:26TuesdayMarch 2019Lecture
SOD1 structure - Toward understanding of ALS pathogenesis
More information Time 14:00 - 15:00Location Helen and Milton A. Kimmelman BuildingLecturer Dr. Stas Engel
Ben Gurion UniversityOrganizer Department of Chemical and Structural BiologyContact -
Date:26TuesdayMarch 2019Lecture
A fresh old look on Vision
More information Time 14:00 - 14:00Location Nella and Leon Benoziyo Building for Brain ResearchLecturer Prof. Michael Herzog
Brain Mind Institute, École Polytechnique Fédérale de Lausanne, SwitzerlandOrganizer Department of Brain SciencesContact Abstract Show full text abstract about In classic models of vision, vision proceeds in a hierarchic...» In classic models of vision, vision proceeds in a hierarchical fashion, from low-level analysis (edges and lines) to figural processing (shapes and objects). Low-level processing determines high-level processing. Here, we show that shape processing determines basic visual processing as much as the other way around. For example, we presented a vernier stimulus and asked observers to indicate its offset direction. Performance strongly deteriorated when the vernier was surrounded by a square, in line with most models of vision. Surprisingly, performance improved when more squares were added. This improvement of performance can hardly be explained by classic models of vision, which predict a further deterioration of performance. We propose that shape interactions precede low-level processing in a recurrent fashion. Using high density EEG and trans-cranial magnetic stimulation (TMS), we show how good Gestalt emerges during recurrent, unconscious processing within 420ms. The outcome of this processing, i.e., the conscious percept, determines, paradoxically, what is usually referred to as early visual processing. -
Date:27WednesdayMarch 2019Lecture
Machine Learning and Statistics Seminar
More information Time 11:15 - 12:15Title Passing Tests Without MemorizingLocation Jacob Ziskind BuildingLecturer Roi Livni
TAUOrganizer Faculty of Mathematics and Computer Science , Department of Computer Science and Applied Mathematics , Department of MathematicsContact -
Date:27WednesdayMarch 2019Lecture
Neural systems underlying reinforcement learning
More information Time 13:00 - 13:00Location Arthur and Rochelle Belfer Building for Biomedical ResearchLecturer Prof. Bruno Averbeck
Chief, Section on Learning and Decision-making, NIHOrganizer Department of Brain SciencesContact Abstract Show full text abstract about I will discuss recent work on the neural circuitry underlyin...» I will discuss recent work on the neural circuitry underlying model-free and model-based reinforcement learning (RL). While there has been considerable focus on dopamine and its action in the striatum, particularly for model-free RL, our recent work has shown that the amygdala also plays an important role in these processes. We have further found that the amygdala and striatum learn in parallel. However, the amygdala learns more rapidly than the striatum. Therefore, each structure tends to be optimized for different reward environments. Overall, the work in our lab outlines roles for multiple neural circuits spanning cortical-basal ganglia-thalamocortical loops, as well as the amygdala’s interaction with these circuits, in RL. -
Date:28ThursdayMarch 2019Colloquia
Towards a Periodic Table Topological Materials
More information Time 11:15 - 12:30Location Edna and K.B. Weissman Building of Physical SciencesLecturer Andrei bernevig
PrincetonOrganizer Faculty of PhysicsContact Abstract Show full text abstract about In the past few years the field of topological materials has...» In the past few years the field of topological materials has uncovered many materials which have topological bands: bands which cannot be continuable to a trivial, “atomic” limit, and which are characterized by an integer topological index. We will review the progress in the field and the new types of topological behavior that is expected from the many predictions in the field. We will also show how, using a new theory called Topological Quantum Chemistry, thousands of new topological materials can be predicted, classified and discovered. The result is that- so far - out of 30000 materials investigated - at least 30 percent of all materials in nature can be classified as topological. One ultimately aims for a full classification of topological materials, available on database websites such as www.topologicalquantumchemistry.com
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Date:28ThursdayMarch 2019Lecture
Why do we fracture our hips? An evolutionary medicine approach to femoral neck fractures in modern humans
More information Time 13:00 - 14:00Location Helen and Martin Kimmel Center for Archaeological ScienceLecturer Hadas Avni
Tel Aviv UniversityOrganizer Academic Educational ResearchContact -
Date:28ThursdayMarch 2019Lecture
Mapping the Breakome of Cancer Cells: What Lessons have we Learned?
More information Time 14:00 - 15:00Title Cancer Research ClubLocation Max and Lillian Candiotty BuildingLecturer Prof. Rami Aqeilan
Chairman, Division of Cell biology, Immunology and Cancer Research, Hebrew University-Hadassah Medical School, JerusalemOrganizer Department of Immunology and Regenerative BiologyContact -
Date:28ThursdayMarch 2019Lecture
Pelletron meeting - by invitation only
More information Time 16:00 - 17:45Contact -
Date:31SundayMarch 201901MondayApril 2019Lecture
1st Israeli Flow Cytometry Conference
More information Time All dayLocation The David Lopatie Conference CentreOrganizer Department of Life Sciences Core FacilitiesHomepage Contact -
Date:31SundayMarch 201901MondayApril 2019Conference
1st Israeli Flow Cytometry Meeting
More information Time 08:00 - 08:00Location The David Lopatie Conference CentreChairperson Ziv PoratOrganizer Department of Systems ImmunologyHomepage -
Date:31SundayMarch 2019Lecture
Physical modelling of canopy flows
More information Time 11:00 - 11:00Location Sussman Family Building for Environmental SciencesLecturer Yardena Raviv
Biological InstituteOrganizer Department of Earth and Planetary SciencesContact -
Date:31SundayMarch 2019Lecture
Geometry, defects and motion in active matter
More information Time 13:00 - 13:00Location Edna and K.B. Weissman Building of Physical SciencesLecturer Luca Giomi
Leiden UniversityOrganizer Department of Physics of Complex SystemsContact Abstract Show full text abstract about The paradigm of “active matter” has had notable successes ov...» The paradigm of “active matter” has had notable successes over the past decade in describing self-organization in a surprisingly broad class of biological and bio-inspired systems: from flocks of starlings to robots, down to bacterial colonies, motile colloids and the cell cytoskeleton. Active systems are generic non-equilibrium assemblies of anisotropic components that are able to convert stored or ambient energy into motion. In this talk, I will discuss some recent theoretical and experimental work on active nematic liquid crystals confined on two-dimensional curved interfaces and highlight how the geometrical and topological structure of the environment can substantially affect collective motion in active materials, leading to spectacular life-like functionalities.
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Date:31SundayMarch 2019Lecture
What makes a good solar cell?
More information Time 14:00 - 15:00Location Perlman Chemical Sciences BuildingLecturer Prof. Thomas Kirchartz
Forschungszentrum JülichOrganizer Department of Molecular Chemistry and Materials ScienceContact Abstract Show full text abstract about For the purpose of identifying novel absorber materials base...» For the purpose of identifying novel absorber materials based on experimental or computational material screening, it is useful to identify the basic ingredients required to make a good solar cell out of the combination of different absorber and contact materials. Figures of merit are needed that quantify whether a certain material is likely to perform well as a solar cell. To answer the question, which parameters are most important, we look into the key properties of good solar cells such as high absorption coefficient, mobility and charge carrier lifetime and study their interdependences and how they determine the efficiency at different thickness of the solar cell. Finally, we study some microscopic parameters such as the effective mass or electron-phonon coupling in a device to identify key microscopic properties that are likely to lead to a combination of high absorption, high mobilities and long lifetimes and thereby high photovoltaic efficiencies -
Date:31SundayMarch 2019Lecture
glucose-dependent insulinotrophic polypeptide (GIP )regulates whole body energy homeostasis via its effects on immune cells
More information Time 15:00 - 16:00Location Arthur and Rochelle Belfer Building for Biomedical ResearchLecturer Prof. Sigal Fishman
The Research Center for Digestive Tract & Liver Diseases Tel-Aviv Sourasky Medical Center Department of Clinical Microbiology & Immunology Sackler Faculty of Medicine, TAU, IsraelContact -
Date:31SundayMarch 2019Lecture
Molecules in Large and Small Pores as Observed by NMR Spectroscopy. Pore Structure, Tortuosity and Molecular Interactions
More information Time 15:30 - 16:30Location Perlman Chemical Sciences BuildingLecturer Prof. Istvan Furo
Department of Chemistry, KTH Royal Institute of Technology, StockholmOrganizer Department of Molecular Chemistry and Materials ScienceContact Abstract Show full text abstract about The seminar summarizes three recent studies (1,2,3) since ...»
The seminar summarizes three recent studies (1,2,3) since that share some common elements: they concern porous materials and the method used is NMR spectroscopy. Yet, the aims differ. In the first study (1), the unknown is the pore structure. In particular, pore structure in hydrogels is difficult to access as water cannot be removed without affecting the pores and in the presence of water the well-honed gas sorption and mercury porosimetries just do not work. The method we invented to remedy this situation is called size-exclusion quantification (SEQ) NMR and it can be seen as the multiplexed analogue of inverse size exclusion chromatography. In effect, we sample by diffusion NMR the size distribution in a polydisperse polymer solution before and after it had been equilibrated with a porous matrix. Size-dependent polymer ingress reveals the pore structure. The method has several advantages over possible alternatives, not least its speed. In the second study (2), we sample the self-diffusion of neat water and other molecules like dimethyl sulfoxide (DMSO) and their mixtures by NMR diffusion experiments for those fluids imbibed into controlled pore glasses (CPG, pore size range 7.5 to 73 nm). Their highly interconnected structure is scaled by pore size and exhibits pore topology independent of size. Relative to the respective diffusion coefficients obtained in bulk phases, we observe a reduction in the diffusion coefficient that is independent of pore size for the larger pores and becomes stronger toward the smaller pores. Geometric tortuosity governs the behavior at larger pore sizes, while the interaction with pore walls becomes the dominant factor toward smaller pore diameters. Deviation from the trends predicted by the popular Renkin equation and variants (4) indicates that the interaction with the pore wall is not just a simple steric one. In the third study (3), the porous material is hydrated cellulose. In that matrix, we identify by using 2H MAS NMR two different groups of water molecules being in slow exchange with each other. Water molecules in one of the groups exhibit anisotropic molecular motions with a high order parameter. Based on, among other things, the observed behavior with increasing vapor pressure, we argue that this water is an integral structural element of the cellulose fibril, that itself is an aggregate of the basic units, the cellulose nanofibrils.
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Date:01MondayApril 2019Lecture
IMM Guest seminar- Dr. Amiram Ariel will lecture on "New cellular and molecular effectors in macrophage-mediated resolution of inflammation."
More information Time 13:00 - 14:00Location Wolfson Building for Biological ResearchLecturer Dr. Amiram Ariel
The Departments of Biology, Medical Sciences and Human Biology, Faculty of Natural Sciences, University of HaifaOrganizer Department of Systems ImmunologyContact
