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February 05, 2018

  • Date:23MondayJuly 2018

    PhD Defense Seminar - Eran Kotler

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    Time
    15:00 - 15:00
    Location
    Wolfson Building for Biological Research
    LecturerEran Kotler
    Organizer
    Department of Molecular Cell Biology
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    Lecture
  • Date:25WednesdayJuly 2018

    Metamaterials: Going Beyond What Nature Gives Us

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    Time
    11:00 - 12:00
    Location
    Perlman Chemical Sciences Building
    LecturerProf. Amy Szuchmacher Blum
    Dept. of Chemistry, McGill University
    Organizer
    Department of Molecular Chemistry and Materials Science
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    AbstractShow full text abstract about Material properties generally arise from the chemical identi...»
    Material properties generally arise from the chemical identities of the constituents. However, as our understanding of how electromagnetic waves interact with matter has grown, it has become possible to design materials whose properties depend on structure rather than composition to produce effects not seen before in nature. These newly developed materials, known as metamaterials, will be the focus of this talk. Metamaterials describe a class of materials in which material properties arise from the interaction of electromagnetic waves with the sub-wavelength sized component structures that constitute them.

    It has become clear that producing nano-based materials such as metamaterials requires breakthroughs in the ability to position materials with nanometer precision. This desire has led to a growing interest in bottom-up, self-assembling systems. Our approach is to use biomolecules as scaffolds because of the specificity and versatility they provide. The use of viruses as nanoscale scaffolds offers the promise of exquisite control for positioning, using a particle that can undergo further self-assembly into extended structures, and allowing the simultaneous creation of many identical complex submicron geometrical structures.

    Here, we present tobacco mosaic virus (TMV) coat protein as a template to produce nanostructured metamaterials. We construct plasmonically coupled nanorings on a sub-30nm size scale using a disk-shaped aggregate of TMV as a template. Computational models suggest that these rings may display metamaterial behavior at optical frequencies. Ensemble spectroscopic measurements reveal intriguing optical properties. Preliminary dark field scattering data, obtained for individual surface bound ring structures, is remarkably consistent with ensemble measurements, demonstrating that the observed optical properties arise from the ring structures. Thus, we show the utility of virus templates in generating nanostructured building blocks for advanced materials.
    Lecture
  • Date:26ThursdayJuly 2018

    Neural circuits for skilled forelimb movement

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    Time
    11:00 - 11:00
    Location
    Gerhard M.J. Schmidt Lecture Hall
    LecturerProf. Eiman Azim
    Molecular Neurobiology Laboratory Salk Institute for Biological Studies, La Jolla, CA
    Organizer
    Department of Brain Sciences
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    AbstractShow full text abstract about Movement shapes our interactions with the world, providing a...»
    Movement shapes our interactions with the world, providing a means to translate intent into action. Among the wide repertoire of mammalian motor behaviors, the precise coordination of limb muscles to propel arms, hands and digits through space with speed and precision represents one of the more impressive achievements of the motor system. Skilled forelimb movements emerge from interactions between feedforward command pathways that induce muscle contraction and feedback systems that report and refine movement. Two broad classes of feedback modify motor output: one that originates in the periphery, and a second that is generated within the central nervous system itself. Yet the mechanisms by which these feedback pathways influence forelimb movement remain poorly understood.

    We take advantage of the genetic tractability of mice to examine the organization of motor circuits and define the ways in which these pathways enable dexterous behaviors. First, I will discuss recent studies that explore the transmission of proprioceptive and cutaneous signals from the forelimb into the spinal cord and brainstem, describing neural circuits that modulate the strength of this peripheral feedback and the implications of this sensory gain control for limb movement. Second, I will describe work exploring a diverse class of spinal interneurons that we hypothesize convey copies of forelimb motor commands as internal feedback to the cerebellum, enabling online predictions of motor outcome and reducing dependence on delayed sensory information. Through a complementary set of molecular, anatomical, electrophysiological and behavioral approaches, these findings are yielding insight into the organizational and functional logic of peripheral and internal feedback, and revealing how the circuits that convey feedback information help to orchestrate skilled behavior.


    Lecture
  • Date:26ThursdayJuly 2018

    Cancer persisters

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    Time
    14:00 - 15:00
    Title
    Cancer Research Club
    Location
    Max and Lillian Candiotty Building
    LecturerProf. Ravid Straussman
    Dept. of Molecular Cell Biology, WIS
    Organizer
    Department of Immunology and Regenerative Biology
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    AbstractShow full text abstract about Persister cells are considered a unique, small sub-populatio...»
    Persister cells are considered a unique, small sub-population of cancer cells that maintain viability under anti-cancer treatments.
    Persisters do not harbor classic resistance-mediating genetic mutations, and their drug-resistance phenotype is thought to be reversible.
    I will describe our novel findings related to the persisters phenotype and how these findings can be exploited to rationally design novel drug combinations optimized to eliminate persisters.
    Lecture
  • Date:01WednesdayAugust 2018

    Ion irradiation in the technology of perpendicular magnetic tunnel junctions

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    Time
    11:00 - 12:00
    Location
    Perlman Chemical Sciences Building
    LecturerProf. Nikolai A. Sobolev
    Department of Physics and I3N, University of Aveiro
    Organizer
    Department of Molecular Chemistry and Materials Science
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    AbstractShow full text abstract about The magnetic properties of ultrathin magnetic films and mult...»
    The magnetic properties of ultrathin magnetic films and multilayers, e.g. magnetic anisotropies and exchange coupling, strongly depend on the surface and interface structure. Chemical composition, crystallinity, grain sizes and their distribution govern the magnetic behaviour. All these structural properties can be modified by particle irradiation. Magnetic patterning without affecting the surface topography becomes feasible, which may be of interest in applications. Homogeneous ion irradiation through masks and focused ion beam and ion projection lithography can be applied for patterning. The creation of magnetic feature sizes down to a few ten nm is possible. The main areas are magnetic data storage applications, such as hard magnetic media with a large perpendicular magnetic anisotropy (PMA) or patterned media with an improved signal-to-noise ratio and magnetic sensor elements.
    The PMA is very common at magnetic metal/oxide interfaces. It is thought to be a result of electronic hybridization between the oxygen and the magnetic transition metal orbit across the interface. Interest in this phenomenon appeared in 2010 when it was demonstrated that the PMA at magnetic transition metal/oxide interfaces could be used to build out-of-plane magnetized magnetic tunnel junctions (MTJ) for spin-transfer-torque magnetic random access memory (STT-MRAM) cells. In these systems, the PMA at the CoFeB/MgO interface can be used to simultaneously obtain good memory retention, thanks to the large PMA amplitude, and a low write current, thanks to a relatively weak Gilbert damping.
    I’ll give a short overview over the irradiation experiments aiming at a modification of magnetic and magnetoresistive properties of different layered magnetic structures. Then I’ll describe in detail our recent experiments on ion irradiation of double-MgO free layers designed for application in perpendicular MTJ. The samples comprised a MgO / FeCoB / X / FeCoB / MgO layer stack, where X stands for an ultrathin (0.2 nm) Ta or W spacer. In particular, we have induced easy-cone states, with different cone angles, in thin (tFeCoB = 2.6 nm) free layers with a W spacer, initially exhibiting a uniaxial anisotropy. This easy cone only exists if K1 > 0, K2 < 0 and – K2 > 2K1, with K1 and K2 being the first- and second-order anisotropy constants. Easy-cone anisotropy may help reduce the stochasticity of the spin transfer torque switching. Importantly, no increase in the Gilbert damping after irradiation has been observed.
    Lecture
  • Date:01WednesdayAugust 2018

    Semiempirical Quantum Chemical Methods: Developments and Validation

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    Time
    14:00 - 15:00
    Location
    Perlman Chemical Sciences Building
    LecturerDr. Pavlo O. Dral
    Max Planck Institute for Coal Research, Mülheim an der Ruhr
    Organizer
    Department of Molecular Chemistry and Materials Science
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    AbstractShow full text abstract about Semiempirical quantum chemical (SQC) methods are indispensa...»
    Semiempirical quantum chemical (SQC) methods are indispensable for performing many computational chemistry studies. They are often used for exploring large systems and carrying out large number of computations within reasonable amount of time.
    My research is focused on the development of SQC methods based on the neglect of diatomic differential overlap (NDDO) integral approximation. In my presentation, I will first talk about our implementation of semiempirical unrestricted natural orbital–configuration interaction (UNO–CI) methods. They allow for black-box selection of active space orbitals, while being thousand times faster than common TD DFT techniques and often are as accurate or even better than TD DFT, which makes them useful for example in studies of organic photovoltaics materials. I will also show that semiempirical methods are useful for understanding unique electronic properties of carbon peopods used as ambipolar transistors and predicting reactivity of radicals via calculating unrestricted local electron affinities and ionization potentials.
    Then I will talk about orthogonalization-corrected methods (OMx).We benchmarked these methods against huge collection of accurate reference data to identify their strengths and weaknesses for groundand excited-state properties, and specifically for noncovalent interactions, to compare with traditional MNDO-based methods and to identify the direction of future developments. Among the reference data, the W4-11 benchmark set proved to be very useful for both validation and development of new orthogonalization- and dispersion-corrected methods (ODMx). The ODMx methods have been carefully designed to be generally better than OMx methods for both ground- and excited-state properties and are as good as OMx for noncovalent interactions.[10] The new methods have also more consistent formalism for calculating heats of formation.
    Finally, I will talk about how machine learning can be used to improve the accuracy of semiempirical methods.

    Lecture
  • Date:01WednesdayAugust 2018

    The role of TrpC2 channel in mediating social behavior of male mice within a group

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    Time
    14:00 - 14:00
    Location
    Nella and Leon Benoziyo Building for Brain Research
    LecturerYefim Pen (PhD Thesis Defense)
    Tali Kimchi Lab, Dept of Neurobiology, WIS
    Organizer
    Department of Brain Sciences
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    Lecture
  • Date:12SundayAugust 2018

    Regulation of the blood-cerebrospinal fluid barrier as a gateway for leukocyte trafficking in physiology and pathology

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    Time
    15:00 - 15:00
    Location
    Nella and Leon Benoziyo Building for Brain Research
    LecturerAlexander Kertser (PhD Thesis Defense)
    Michal Schwartz Lab, Dept of Neurobiology, WIS
    Organizer
    Department of Brain Sciences
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    Lecture
  • Date:13MondayAugust 2018

    Catecholamines in the hippocampal formation

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    Time
    10:00 - 11:15
    Location
    Gerhard M.J. Schmidt Lecture Hall
    LecturerSima Verbitsky (PhD Thesis Defense)
    Menahem Segal Lab, Dept of Neurobiology, WIS
    Organizer
    Department of Brain Sciences
    Contact
    AbstractShow full text abstract about Monoaminergic (noradrenergic, dopaminergic and serotonergic)...»
    Monoaminergic (noradrenergic, dopaminergic and serotonergic) modulation of hippocampal activity is assumed to play a major role in neuronal plasticity, learning and memory. Understanding the locus of action of these neuromodulators at the cellular level will expand our knowledge of their nature and allow us to identify issues related to their dysfunction. In the present work I study the effects of norepinephrine (NE) and dopamine (DA) on spontaneous and evoked activity in patch-clamped neurons of hippocampal slices. Both DA and NE induced a significant decrease in the amplitude of the evoked PSCs recorded from CA1 pyramidal neurons in response to stimulation of the Schaffer collaterals, accompanied by a small decrease in the cell input resistance, and a small hyperpolarization. While decreasing the evoked PSCs, NE promoted an overall increase in spontaneous synaptic activity. Pharmacological assessment of these results indicated an α1 adrenergic receptor involvement in both the decrease of the amplitude of evoked PSCs as well as the increase in spontaneous activity. Surprisingly, the effect of NE on evoked PSCs was partially antagonized by D1 dopaminergic receptor antagonist SCH23390, which suggests that NE activates dopamine receptors. The effect of DA on evoked PSCs was blocked by α1 adrenergic receptor antagonist prazosin, which suggests that DA, in turn, is activating adrenergic receptors.
    Noradrenergic system is highly affected by stress; in particular, the differences between NE effects in dorsal and ventral hippocampus (DH and VH, respectively) have been shown to change in stressed animals.
    In this work I used two types of stress protocols – Prenatal Stress (PS) and Acute Stress (AS) – to study the effect of stress on monoamine responses in slices of DH and VH. In non-stressed rats, NE effect on the evoked PSCs is larger in DH than in VH. PS and AS rats increased NE effect in VH, thus abolishing the difference between DH and VH. Pharmacological data suggests that these differences result from differential efficiencies of α1 and D1 receptors between DH and VH of both control and PS rats. Acute stress reversed the difference between PS and control rats; in the AS slices the PSC reduction was significantly different between DH and VH of PS rats, and not in control rats.
    I conclude that stress increases the NE modulation in VH, but not in DH, thus increasing the role of emotional processing associated with the VH.
    Lecture
  • Date:21TuesdayAugust 2018

    Clinical Research-Trials and Tribulations, Peril and Promise

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    Time
    14:00 - 15:00
    Title
    Special Guest Roundtable Seminar
    Location
    Max and Lillian Candiotty Building
    LecturerProf. Adrian Langleben
    Director, Medical Oncology, Royal Victoria Hospital, McGill University. McGill University Department of Medical Oncology, Montreal, Canada
    Organizer
    Department of Immunology and Regenerative Biology
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    Lecture
  • Date:27MondayAugust 2018

    In situ structural studies of the cell cytoskeleton by cryo-electron tomography

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    Time
    14:00 - 15:00
    Title
    Special Guest Seminar
    Location
    Max and Lillian Candiotty Building
    LecturerProf. Ohad Medalia
    Department of Biochemistry University of Zurich, Switzerland
    Organizer
    Department of Immunology and Regenerative Biology
    Contact
    AbstractShow full text abstract about Recent advances in cryo-electron microscopy revolutionized t...»
    Recent advances in cryo-electron microscopy revolutionized the possibilities and capabilities of structural analysis. This presents an exciting opportunity to explore the architecture of macromolecular-complexes which could not be crystallized, but also opens a window into in situ structural determination. Here, I will discuss the excitement in resolving macromolecular structures at atomic resolution and report on advances and challenges in studying molecular assemblies in individual cells and multicellular organisms at ~1nm of resolution. A special focus will be given to the functional organization of the cell’s cytoskeleton, i.e., the actin cytoskeleton, intermediate filaments and nuclear lamins. Our study indicates that in situ structural biology, at high-resolution, shed light on structural assemblies that can only be studied in their native environment, i.e. the cell.
    Lecture
  • Date:28TuesdayAugust 201830ThursdayAugust 2018

    WHELMI

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    Time
    08:00 - 08:00
    Location
    Edna and K.B. Weissman Building of Physical Sciences
    Chairperson
    Perla Zalcberg
    Conference
  • Date:28TuesdayAugust 2018

    Thesis defence presentation by Avital Barak (Prof. Idit Shachar's lab)

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    Time
    10:30 - 10:30
    Title
    Unveiling key players in the CLL-microenvironment interplay.
    Location
    Nella and Leon Benoziyo Building for Biological Sciences
    LecturerAvital Barak
    Organizer
    Department of Systems Immunology
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    Lecture
  • Date:29WednesdayAugust 2018

    Learning probabilistic representations in randomly connected neural circuits

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    Time
    10:30 - 10:30
    Location
    Gerhard M.J. Schmidt Lecture Hall
    LecturerOri Maoz (PhD Thesis Defense)
    Elad Schneidman Lab, Dept of Neurobiology, WIS
    Organizer
    Department of Brain Sciences
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    AbstractShow full text abstract about The brain represents and reasons probabilistically about com...»
    The brain represents and reasons probabilistically about complex stimuli and motor actions using a noisy, spike-based neural code. A key building block for such neural computations, as well as the basis for supervised and unsupervised learning, is the ability to estimate the surprise or likelihood of incoming high-dimensional neural activity patterns. Despite progress in statistical modeling of neural responses and deep learning, current approaches either do not scale to large neural populations or cannot be implemented using biologically realistic mechanisms. Inspired by the sparse and random connectivity of real neuronal circuits, we present a new model for neural codes that accurately estimates the likelihood of individual spiking patterns from the joint activities of actual populations of cortical neurons. The model has a straightforward, scalable, efficiently learnable, and realistic neural implementation as either a randomly connected neural circuit or as single neuron with a random dendritic tree. In the corresponding implementation, a neuron can take advantage of random connectivity leading to it in order to autonomously learn the respond with the surprise of its input patterns based on the previous observed patterns. Importantly, it can be achieved using a local learning rule that utilizes noise intrinsic to neural circuits. Slower, structural changes in random connectivity, consistent with rewiring and pruning processes occurring on developmental time scales, can further improve the efficiency and sparseness of the resulting neural representations. Our results merge insights from neuroanatomy, machine learning, and theoretical neuroscience to suggest random sparse connectivity as a key design principle for neuronal computation.
    Lecture
  • Date:30ThursdayAugust 2018

    PhD Defense Seminar- “The non-cell-autonomous function of p53 in the liver ״

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    Time
    10:00 - 10:00
    Location
    Wolfson Building for Biological Research
    LecturerMeital Charni (Prof. Varda Rotter's lab)
    Organizer
    Department of Molecular Cell Biology
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  • Date:30ThursdayAugust 2018

    Dynamics of social representations in the prefrontal cortex and their alterations in mouse models of autism

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    Time
    12:30 - 12:30
    Location
    Gerhard M.J. Schmidt Lecture Hall
    LecturerDana Rubi Levy (PhD Thesis Defense)
    Ofer Yizhar Lab, Dept of Neurobiology, WIS
    Organizer
    Department of Brain Sciences
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    AbstractShow full text abstract about The prefrontal cortex (PFC) plays an important role in regul...»
    The prefrontal cortex (PFC) plays an important role in regulating social functions in mammals, and impairments in this region have been linked with social dysfunction in psychiatric disorders. Yet little is known of how the PFC encodes social information and of how social representations may be altered in such disorders. Here, we show that neurons in the medial PFC (mPFC) of freely behaving mice preferentially respond to socially-relevant sensory cues. Population activity patterns in the mPFC differed considerably between social and nonsocial stimuli and underwent experience-dependent refinement. In Cntnap2 knockout mice, a genetic model of autism, both the categorization of sensory stimuli and the refinement of social representations were impaired. Noise levels in spontaneous population activity were higher in Cntnap2 mice, and correlated strongly with the degree to which social representations were disrupted. Our findings elucidate the encoding of social sensory cues in the mPFC, and provide an important link between altered prefrontal dynamics and autism-associated social dysfunction.
    Lecture
  • Date:02SundaySeptember 201806ThursdaySeptember 2018

    Surface Micro-Spectroscopy and Spectro-Microscopy

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    Time
    08:00 - 08:00
    Location
    The David Lopatie Conference Centre
    Chairperson
    Sidney Cohen
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  • Date:05WednesdaySeptember 2018

    Condensation of the ARF19 transcription factor regulates its activity

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    Time
    11:00 - 11:00
    Location
    Nella and Leon Benoziyo Building for Biological Sciences
    LecturerProf. Lucia Strader
    Department of Biology, Washington University in St. Louis, USA
    Organizer
    Department of Plant and Environmental Sciences
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  • Date:12WednesdaySeptember 2018

    Diversity of transcriptional machineries that drive resistance to anti-tumor agents in head and neck cancer

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    Time
    14:00 - 15:00
    Title
    Speciqal Guest Seminar
    Location
    Max and Lillian Candiotty Building
    LecturerDr. Moshe Elkabets
    The Shraga Segal Dept. of Microbiology, Immunology and Genetics Faculty of Health Sciences Ben-Gurion University of the Negev Beer-Sheva
    Organizer
    Department of Immunology and Regenerative Biology
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    AbstractShow full text abstract about Drug resistance is a major barrier in medical oncology. Refr...»
    Drug resistance is a major barrier in medical oncology. Refractoriness to anti-cancer therapies is attributed to autonomous-tumor cell survival signaling (intrinsic mechanisms) or is mediated by growth factors secreted by cells in the tumor microenvironment (extrinsic mechanisms). Here I will describe the transcriptional machineries that regulate the expression of receptor tyrosine kinases following treatments with PI3K and EGFR therapies in squamous cell carcinoma of the head and neck. Specifically, I will show that AP-1 regulates AXL expression in PI3K-resistant cells, and EHF determines HER2/3 expression following EGFR inhibition.
    Lecture
  • Date:17MondaySeptember 2018

    Scientific Council meeting

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    Time
    14:00 - 16:00
    Location
    The David Lopatie Conference Centre
    Contact
    Academic Events

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