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February 18, 2016

  • Date:27MondayJanuary 2025

    Midrasha on Groups Seminar

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    Time
    14:15 - 16:00
    Title
    Detection of homomorphisms via metric-functionals
    Location
    Jacob Ziskind Building
    Room 1 - 1 חדר
    LecturerAriel Yadin
    BGU
    Organizer
    Department of Mathematics
    Contact
    AbstractShow full text abstract about Metric-functionals play an analogous role to linear function...»
    Metric-functionals play an analogous role to linear functionals for general metric spaces, where there is no linear structure.  On Cayley graphs these objects identify with "horofunctions" or more apropriately metric-functionals.  As observed 20 years ago by Anders Karlsson these objects are useful also for detection or construction of homomorphisms into abelian groups. In many cases, finding such homomorphisms from finite index subgroups enables a decomposition of the group into "smaller" structures, so that one can inductively understand the geometric structure.  (This was done for example by Gromov in his famous theorem regarding polynomial growth, but also in many other cases.) We can prove that it is not always possible to detect homomorphisms using the metric-functional boundary of a Cayley graph. We thus extend the notion of Cayley graphs to a broader class of metric spaces which we call "Banach metrics".  We prove that these can always detect (virtual) homomorphisms in their metric-functional boundary. This provides a new way of searching for these kinds of decompositions, by creatively constructing suitable Banach metrics. 

    All notions will be explained during the talk, no prior knowledge is required.

    Based on joint works with Liran Ron-George.
    Lecture
  • Date:28TuesdayJanuary 2025

    From Microbes to Human Brains: Unraveling and Targeting Amyloids via Advanced Structural Biology Tools

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    Time
    14:00 - 15:00
    Location
    Gerhard M.J. Schmidt Lecture Hall
    LecturerDr. Einav Tayeb-Fligelman
    Organizer
    Department of Chemical and Structural Biology
    Lecture
  • Date:29WednesdayJanuary 2025

    Special Guest Seminar

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    Time
    11:00 - 12:00
    Title
    Mapping Antibody-Mediated Mechanisms of Protection Against Shigella
    Location
    Max and Lillian Candiotty Building
    Auditorium
    LecturerDr. Biana Bernshtein
    Ragon Institute of MGH, MIT and Harvard
    Organizer
    Department of Immunology and Regenerative Biology
    Contact
    Lecture
  • Date:30ThursdayJanuary 2025

    In honor of the 100th birthday of Prof. Yigal Talmi

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    Time
    11:15 - 12:30
    Title
    Factorization and Universality in Nuclear Physics
    Location
    Physics Weissman Auditorium
    LecturerProf. Nir Barnea
    Organizer
    Faculty of Physics
    Contact
    AbstractShow full text abstract about The study of dilute, strongly interacting quantum gases reve...»
    The study of dilute, strongly interacting quantum gases revealsuniversal properties that transcend the specifics of individualsystems. These features arise from their short-range behaviorand are encapsulated in a key quantity called the “contact”, whichquantifies the probability of two particles being in close proximity.In this talk, I will introduce the contact theory and its extension tonuclear and molecular systems beyond the zero-range limit. I willdemonstrate its applicability in analyzing nuclear electronscattering and photo absorption reactions.Additionally, I will discuss how mean-field approximations, such asthe nuclear shell model, can effectively estimate the contact,offering valuable insights into the underlying physics.
    Colloquia
  • Date:30ThursdayJanuary 2025

    Vision and AI

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    Time
    12:15 - 13:15
    Title
    Understanding and Enhancing Deep Neural Networks with Automated Interpretability
    Location
    Jacob Ziskind Building
    Room 1 - 1 חדר
    LecturerTamar Rott Shaham
    MIT
    Organizer
    Department of Computer Science and Applied Mathematics
    Contact
    AbstractShow full text abstract about Deep neural networks are becoming incredibly sophisticated; ...»
    Deep neural networks are becoming incredibly sophisticated; they can generate realistic images, engage in complex dialogues, analyze intricate data, and execute tasks that appear almost human-like. But how do such models achieve these abilities?

    In this talk, I will present a line of work that aims to explain behaviors of deep neural networks. This includes a new approach for evaluating cross-domain knowledge encoded in generative models, tools for uncovering core mechanisms in large language models, and their behavior under fine-tuning. I will show how to automate and scale the scientific process of interpreting neural networks with the Automated Interpretability Agent, a system that autonomously designs experiments on models’ internal representations to explain their behaviors. I will demonstrate how such understanding enables mitigating biases and enhancing models’ performance. The talk will conclude with a discussion of future directions, including developing universal interpretability tools and extending interpretability methods to automate scientific discovery.

    Bio: 

    Tamar Rott Shaham is a postdoctoral researcher at MIT CSAIL in Prof. Antonio Torralba’s lab. She earned her PhD from the ECE faculty at the Technion, supervised by Prof. Tomer Michaeli. Tamar has received several awards, including the ICCV 2019 Best Paper Award (Marr Prize), the Google WTM Scholarship, the Adobe Research Fellowship, the Rothchild Postdoctoral Fellowship, the Vatat-Zuckerman Postdoctoral Scholarship, and the Schmidt Postdoctoral Award.
    Lecture
  • Date:30ThursdayJanuary 2025

    Genomic and functional approaches to modeling and targeting cancer aneuploidy announced

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    Time
    15:00 - 16:00
    Location
    Nella and Leon Benoziyo Building for Biological Sciences
    LecturerProf. Uri Ben-David, Prof. Uri Ben-David
    Dept of Human Molecular Genetics & Biochemistry, Faculty of Medicine, Tel-Aviv University
    Organizer
    Department of Biomolecular Sciences
    Contact
    AbstractShow full text abstract about Aneuploidy, an imbalanced number of chromosomes or chromosom...»
    Aneuploidy, an imbalanced number of chromosomes or chromosome arms, is a genetic hallmark of cancer cells, yet aneuploidy remains a biological enigma and a missed opportunity for cancer therapy. My lab applies experimental and computational approaches to dissect the basic biology underlying cancer aneuploidy and to study its cellular consequences. In this seminar, I will focus on an unpublished study in which we discovered an important role for a recurrent aneuploidy in driving brain metastasis, revealed the underlying molecular mechanism, and identified a therapeutically-relevant cellular vulnerability that is associated with this common aneuploidy.
    Lecture
  • Date:30ThursdayJanuary 2025

    Special Clore Seminar - The Clore Center for Biological Physics

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    Time
    16:15 - 18:00
    Title
    The Physics of Ancient Chromosomes
    Location
    Nella and Leon Benoziyo Physics Library
    LecturerProf. Erez Lieberman Aiden
    Refreshments at 16:00
    Organizer
    Clore Center for Biological Physics
    Contact
    AbstractShow full text abstract about We report that skin from a female woolly mammoth (†Mammuthus...»
    We report that skin from a female woolly mammoth (†Mammuthus primigenius) that died 52, 000 years ago retained its ancient genome architecture. We hypothesize that, shortly after this mammoth’s death, the sample spontaneously freeze-dried in the Siberian cold, leading to a glass transition that preserved subfossils of ancient chromosomes at nanometer scale. This talk will explore the physics that underlies the preservation of ancient chromosomes. FOR THE LATEST UPDATES AND CONTENT ON SOFT MATTER AND BIOLOGICAL PHYSICS AT THE WEIZMANN, VISIT OUR WEBSITE: https://www.biosoftweizmann.com/
    Lecture
  • Date:02SundayFebruary 2025

    Methane mitigation by unique redox couplings in freshwater sediments

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    Time
    11:00 - 12:00
    Location
    Sussman Family Building for Environmental Sciences
    M. Magaritz seminar room
    LecturerOrit Sivan
    Organizer
    Department of Earth and Planetary Sciences
    AbstractShow full text abstract about This talk tests the ability of natural freshwater lakes and ...»
    This talk tests the ability of natural freshwater lakes and margins to attenuate the emissions ofthe greenhouse gas methane (CH4) to the atmosphere under warming climate. I will show howmicrobial communities manage to survive and mitigate methane emissions under energylimited, highly reduced conditions of deep methanogenic lake sediments, through redoxcouplings of methane to Mn-Fe-N. Complex redox couplings between those species were alsoexplored in thermokarst lakes and margins, which are extensively formed by permafrost thawin the Arctic. The cycles were quantified using geochemical and microbial profiles, togetherwith stable isotope probing experiments close to natural conditions. The profiles andincubations show active microbial population that exhibit surprisingly both aerobic andanaerobic methane oxidation in methanogenic sediments and upland Arctic soils, fueled bynitrogen and iron redox cycles.
    Lecture
  • Date:02SundayFebruary 2025

    The Clore Center for Biological Physics

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    Time
    12:45 - 14:30
    Title
    Design principles of protein-DNA Recognition Specificity in Embryonic Stem Cells
    Location
    Nella and Leon Benoziyo Physics Building
    LecturerDavid B. Lukatsky
    Lunch at 12:45
    Organizer
    Clore Center for Biological Physics
    Contact
    AbstractShow full text abstract about Transcription factors (TFs) bind genomic DNA regulating gene...»
    Transcription factors (TFs) bind genomic DNA regulating gene expression and developmental programs in embryonic stem cells (ESCs). Even though comprehensive genome-wide molecular maps for TF-DNA binding are experimentally available for key pluripotency-associated TFs, the understanding of molecular design principles responsible for TF-DNA recognition remains incomplete. In this talk, I will show that binding preferences of key pluripotency TFs exhibit bimodality in the local GC-content distribution. Sequence-dependent binding specificity of these TFs is distributed across three major contributions. First, local GCcontent is dominant in high-GC-content regions. Second, recognition of specific k-mers is predominant in low-GC-content regions. Third, short tandem repeats (STRs) are highly predictive in both low- and high-GC-content regions. In sharp contrast, binding preferences of a key oncogenic protein, c-Myc, are exclusively dominated by local GC-content and STRs in high-GC-content genomic regions. I will propose that the transition in the TF-DNA binding landscape upon ESC differentiation is solely regulated by the concentration of c-Myc, which forms a bivalent c-Myc-Max heterotetramer upon promoter binding, competing with key pluripotency factors. Taken together, these findings point out that c-Myc may significantly affect the genome-wide TF-DNA binding landscape, chromatin structure, and enhancerpromoter interactions.FOR THE LATEST UPDATES AND CONTENT ON SOFT MATTER AND BIOLOGICAL PHYSICS AT THE WEIZMANN, VISIT OUR WEBSITE: https://www.biosoftweizmann.com/
    Lecture
  • Date:03MondayFebruary 2025

    Weizmann neuroscience research symposium

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    Time
    08:00 - 08:00
    Location
    The David Lopatie Conference Centre
    Chairperson
    Rony Paz
    Organizer
    The Azrieli Institute for Brain and Neural Sciences
    Conference
  • Date:03MondayFebruary 2025

    New concepts, catalysts and methods in synthetic chemistry

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    Time
    11:00 - 12:15
    Location
    Gerhard M.J. Schmidt Lecture Hall
    LecturerProf. Mark Gandelman
    AbstractShow full text abstract about In my lecture, I will showcase how designing new materials a...»
    In my lecture, I will showcase how designing new materials and exploring their fundamental properties can lead to innovative concepts and practical applications in organic chemistry. We will begin by discussing the synthesis of novel halo-organic compounds that enable the stereoselective catalytic synthesis of biologically relevant chiral organofluorides.     The talk will primarily focus on the versatile chemistry of N-Heterocyclic Nitrenium ions (NHNs) – the nitrogen-based analogs of ubiquitous N-Heterocyclic Carbenes. We will demonstrate their unique coordination abilities, analyze their properties, and highlight their role in stabilizing elusive species.1,2 Nitrenium ions represent a novel family of nitrogen-based Lewis acids3 and serve as efficient metal-free catalysis, frustrated Lewis pairs partners4 and platform for isolating valuable radicals.5 Finally, we will demonstrate how the fundamental understanding nitrenium properties led to the development of triazenolysis reaction - an aza-version of the canonical alkene ozonolysis.6References:[1] Nat. Chem. 2011, 5, 525.[2] Chem.Sci. 2014, 5, 1305.[3] J. Am. Chem. Soc. 2017, 139, 4062.[4] Angew. Chem. Int. Ed. 2020, 59, 23476.[5] J. Am. Chem. Soc. 2022, 144, 23642; J. Am. Chem. Soc. 2024, 146, 19474.[6] Nat. Chem. 2025, 17, 101.
    Colloquia
  • Date:03MondayFebruary 2025

    Foundations of Computer Science Seminar

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    Time
    11:15 - 12:15
    Title
    Vizing's Theorem in Near-Linear Time
    Location
    Jacob Ziskind Building
    Room 1 - 1 חדר
    LecturerShay Solomon
    TAU
    Organizer
    Department of Computer Science and Applied Mathematics
    Contact
    AbstractShow full text abstract about Vizing's Theorem from 1964 states that any n-vertex m-e...»
    Vizing's Theorem from 1964 states that any n-vertex m-edge graph of maximum degree Δ can be edge colored using at most Δ+1 different colors.

    Vizing's original proof is algorithmic and implies that such an edge coloring can be found in O(mn) time.

    In this talk, I'll present a randomized algorithm that computes a (Δ+1)-edge coloring in near-linear time -- in fact, only O(mlogΔ) time -- with high probability.
    Lecture
  • Date:04TuesdayFebruary 2025

    From chromosomes to single genes: Designing DNA molecules for autonomous cell-free systems

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    Time
    14:00 - 15:00
    Location
    Gerhard M.J. Schmidt Lecture Hall
    LecturerDr. Ferdinand Greiss
    Organizer
    Department of Chemical and Structural Biology
    Lecture
  • Date:05WednesdayFebruary 2025

    2025 Israeli Nucleic Acids Therapeutics Meeting

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    Time
    08:30 - 18:00
    Location
    The David Lopatie Conference Centre
    Chairperson
    Igor Ulitsky
    Organizer
    Abisch-Frenkel RNA Therapeutics Center
    Conference
  • Date:05WednesdayFebruary 2025

    Azrieli institute for brain and neural sciences students seminar

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    Time
    10:30 - 12:00
    Title
    students seminar
    Location
    Arthur and Rochelle Belfer Building for Biomedical Research
    Botnar auditorium
    Organizer
    The Azrieli Institute for Brain and Neural Sciences
    Lecture
  • Date:05WednesdayFebruary 2025

    Life Sciences Luncheon

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    Time
    12:00 - 14:00
    Title
    Prof. Tamar Geiger
    Location
    Nella and Leon Benoziyo Building for Biological Sciences
    Auditorium
    LecturerProf. Tamar Geiger
    Contact
    Lecture
  • Date:06ThursdayFebruary 2025

    Novel informatics approaches to solving biological puzzles

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    Time
    09:00 - 10:00
    Location
    Candiotty
    Auditorium
    LecturerDr. Danny Ben-Avraham, Dr. Avital Sarusi-Portugues, Dr. Barak Markus, Dr. Efrat Ben-Zeev
    Bioinformatics unit, G-INCPM
    Lecture
  • Date:06ThursdayFebruary 2025

    Vision and AI

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    Time
    12:15 - 13:15
    Title
    Leveraging Pretrained Generative Models for Real Image Editing
    Location
    Jacob Ziskind Building
    Room 1 - 1 חדר
    LecturerOr Patashnik
    Tel Aviv University
    Organizer
    Department of Computer Science and Applied Mathematics
    Contact
    AbstractShow full text abstract about Image generative models are advancing rapidly, producing ima...»
    Image generative models are advancing rapidly, producing images of remarkable realism and fidelity. However, existing models often lack precise control over the generated content, limiting their image editing capabilities and the integration of real content into synthesized imagery. In this talk, I will demonstrate how a deep understanding of the inner mechanisms of large-scale pretrained generative models enables the design of powerful techniques for a variety of image manipulation tasks. By analyzing the semantic representations learned by these models, I will present methods that enable effective content editing. Additionally, I will discuss the challenges and trade-offs involved in manipulating real content and propose strategies to address these challenges. Finally, I will highlight recent advancements in incorporating real content, with a particular focus on techniques for injecting information into pretrained models.

    Bio: Or Patashnik (https://orpatashnik.github.io/) is a Computer Science PhD candidate at Tel Aviv University, supervised by Daniel Cohen-Or. Her research focuses on computer graphics and its intersection with computer vision, with an emphasis on generative tasks such as image editing, personalization, and image inversion using large-scale pretrained models. Recently, she has been particularly interested in better understanding diffusion models for various applications.
    Lecture
  • Date:06ThursdayFebruary 2025

    Senescent cells on the crossroads of cancer and aging

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    Time
    14:00 - 15:00
    Location
    Candiotty Auditorium
    LecturerProf. Valery Krizhanovsky
    Organizer
    Dwek Institute for Cancer Therapy Research , Moross Integrated Cancer Center (MICC)
    Lecture
  • Date:09SundayFebruary 2025

    Climate and Solar Variability: A Critical Evaluation

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    Time
    11:00 - 12:00
    Location
    Sussman Family Building for Environmental Sciences
    M. Magaritz seminar room
    LecturerNathan Steiger
    Contact
    AbstractShow full text abstract about It has been claimed that solar variability is the largest dr...»
    It has been claimed that solar variability is the largest driver of climatic variability across thePhanerozoic eon and that it accounts for ½ to ⅔ of20th century warming. Apparent evidence insupport of these claims has been mustered frommodeling work along with paleoclimatic, oceanographic, and other observational datasets.Here I will show that this research fails to replicate. I additionally find that many studies claiming tosupport a strong solar-climate link suffer from fundamental statistical and conceptual errors thatinvalidate their results.
    Lecture

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