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אפריל 25, 2016

  • Date:31ראשוןדצמבר 2023

    The Clore Center for Biological Physics

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    שעה
    13:15 - 14:15
    כותרת
    Erasing information fast and cheap --- How to approach Landauer’s bound?
    מיקום
    בניין הפיזיקה ע"ש עדנה וק.ב. וייסמן
    מארגן
    מרכז לפיזיקה ביולוגית עש קלור
    צרו קשר
    תקצירShow full text abstract about The celebrated Landauer bound is the fundamental universal c...»
    The celebrated Landauer bound is the fundamental universal cost of computation: there must be dissipation of at least kBTlog2 per erasure of one bit. This fundamental bound is reached when the erasure protocol is performed in the slow quasi-static limit. Generally, the faster the erasure protocol, the more dissipation is generated.
    In this talk, I will present two approaches that challenge this view. First, it will be shown that by the use of a conserved quantity in the system, one can bypass Liouville’s theorem and perform erasure at zero energetic cost. The second approach that will be discussed is considering a system that is weakly coupled to the environment. In that case, one can design an erasure procedure that does not scale with its operation time.
    הרצאה
  • Date:02שלישיינואר 2024

    A paradigm shift in GPCR recruitment and activity: GPCR Voltage Dependence Controls Neuronal Plasticity and Behavior

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    שעה
    כל היום
    מיקום
    אולם הרצאות ע"ש גרהרד שמידט
    מרצהProf. Moshe Parnas
    Dept of Physiology and Pharmacology Tel Aviv University
    מארגן
    המחלקה למדעי המוח
    צרו קשר
    תקצירShow full text abstract about : G-protein coupled receptors (GPCRs) play a paramount role ...»
    : G-protein coupled receptors (GPCRs) play a paramount role in diverse brain functions. Twenty years ago, GPCR activity was shown to be regulated by membrane potential in vitro, but whether the voltage dependence of GPCRs contributes to neuronal coding and behavioral output under physiological conditions in vivo has never been demonstrated. We show in two different processes that muscarinic GPCR mediated neuromodulation in vivo is voltage dependent. First, we show that muscarinic type A receptors (mAChR-A) mediated neuronal potentiation is voltage dependent. This potentiation voltage dependency is abolished in mutant flies expressing a voltage independent receptor. Most important, muscarinic receptor voltage independence caused a strong behavioral effect of increased odor habituation. Second, we show that muscarinic type B receptors (mAChR-B) voltage dependency is required for both efficient and accurate learning and memory. Normally, to prevent non-specific olfactory learning and memory, mAChR-B activity suppress both signals that are required for plasticity. Behavior experiments demonstrate that mAChR-B knockdown impairs olfactory learning by inducing undesired changes to the valence of an odor that was not associated with the reinforcer. On the other hand, mAChR-B voltage dependence prevents mAChR-B to interfere with plasticity in neurons that are required for the learning and memory process. Indeed, generating flies with a voltage independent mAChR-B resulted in impaired learning. Thus, we provide the very first demonstrations of physiological roles for the voltage dependency of GPCRs by demonstrating crucial involvement of GPCR voltage dependence in neuronal plasticity and behavior. As such, our findings create a paradigm shift in our thinking on GPCR recruitment and activity. Together, we suggest that GPCR voltage dependency plays a role in many diverse neuronal functions including learning and memory and may serve as a target for novel drug development.
    Light refreshments before the seminar.
    הרצאה
  • Date:02שלישיינואר 2024

    Enhanced Growth in Atomic Layer Deposition of Transition Metals: The Role of Surface Diffusion and Nucleation Sites

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    שעה
    11:15 - 12:15
    מיקום
    אולם הרצאות ע"ש גרהרד שמידט
    מרצהDr. Amnon Rothman
    Chemical Engineering, Stanford University
    מארגן
    המחלקה לכימיה מולקולרית ולמדע חומרים
    צרו קשר
    תקצירShow full text abstract about Noble metal thin films have attracted significant interest o...»
    Noble metal thin films have attracted significant interest owing to their distinctive properties and structures, which make them ideal for applications in microelectronics, catalysis, energy, and photovoltaics. While several parameters influence the properties of these metals for such applications, the deposition process remains a critical factor. Atomic Layer Deposition (ALD) stands out as a prevalent deposition technique due to its surface-sensitive nature. The ALD process is characterized by its self-limiting surface reactions, promoting a layer-by-layer growth mechanism and allowing for precise control over film thickness and conformality. However, challenges arise in achieving continuous, pinhole-free noble metal ALD layers on oxide surfaces, often resulting in low film quality. These challenges can be traced back to the lack of adequate nucleation sites and the poor wettability of the low-surface energy substrates. The research studied the impact of substrate surface functionalization using organometallic molecules, such as trimethylaluminum (TMA) and diethylzinc (DEZ), on the nucleation and growth of Ru layers. The results reveal an enhancement in both nucleation density and the average diameter of the Ru nanoparticles deposited, and these improvements were attributed to an increase in both nucleation sites and elevated surface diffusivity. The latter effect is speculated to result from a reduction in the substrate's surface free energy. The study also examines the influence of substrate surface characteristics, including surface termination and crystallinity, on the nucleation and growth of Ru metal via ALD. The morphologies of the resulting Ru thin films are studied using scanning electron microscopy (SEM), atomic force microscopy (AFM), and grazing incidence small angle x-ray scattering (GISAXS). These analytical results are integrated with an experimental model to elucidate the differences in growth mechanisms observed across substrates. The findings underscore the importance of substrate choice in the ALD process and broaden our understanding of Ru metal growth. This research serves as an important step in optimizing the ALD process for various applications by tailoring substrate selection.
    הרצאה
  • Date:03רביעיינואר 2024

    Special Guest Seminar: Dr. Sharon Fleischer

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    שעה
    10:00 - 12:00
    כותרת
    Stem cell based cardiac tissue models to study the human heart in health and disease
    מיקום
    בניין וולפסון למחקר ביולוגי
    מרצהDr. Sharon Fleischer
    Columbia University
    מארגן
    המחלקה לביולוגיה מולקולרית של התא
    צרו קשר
    הרצאה
  • Date:03רביעיינואר 2024

    Machine Learning and Statistics Seminar

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    שעה
    11:15 - 12:15
    כותרת
    Theoretical Foundations of Neural Networks: Expressiveness, Optimization, and Generalization
    מיקום
    בניין יעקב זיסקינד
    מארגן
    המחלקה למדעי המחשב ומתמטיקה שימושית
    צרו קשר
    תקצירShow full text abstract about In recent years neural networks achieved state-of-the-art re...»
    In recent years neural networks achieved state-of-the-art results in many different applications such as computer vision, natural language processing, and speech recognition. Despite their empirical success, the theoretical understanding of neural networks remains limited. This gap can be seen in all aspects of learning: optimization, generalization, and expressiveness. My thesis aims to address this gap by providing theoretical insights into neural network success, bridging the practical and theoretical aspects. In this talk, I focus on the three following topics:
    (1) Expressiveness: We study the memorization capabilities of neural networks, and provide a construction for memorization of $N$ labeled samples using a network with $ ilde{O}(sqrt{N})$ parameters, which is optimal up to log factors due to known lower bounds. Our analysis underscores the crucial role of depth in achieving near-optimal memorization capacity.
    (2) Optimization: Investigating the effects of mild over-parameterization on the optimization landscape of a simple ReLU network in a well-studied teacher-student setting.  We prove that the optimization landscape changes significantly between exact and over-parameterized regimes. For example, over-parameterization can turn local minima into saddle points in certain cases, making the landscape more favorable.  

    (3) Generalization: Exploring the generalization properties of interpolating 2-layer neural networks in the presence of label noise. We prove that in this overfitting regime, the input dimension plays a major role in the type of overfitting the network achieves. Namely, in dimension 1 the overfitting scales with the magnitude of the noise (tempered overfitting), while in high dimensions it converges to zero with the input dimension (benign overfitting).

     
    הרצאה
  • Date:03רביעיינואר 2024

    Chemical and Biological Physics Guest seminar

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    שעה
    15:00 - 16:00
    כותרת
    Atomic arrays as programmable quantum processors and sensors
    מיקום
    אולם הרצאות ע"ש גרהרד שמידט
    מרצהDr Ran Finkelstein
    Caltech
    מארגן
    המחלקה לפיזיקה כימית וביולוגית
    צרו קשר
    תקצירShow full text abstract about Large arrays of trapped neutral atoms have emerged over the ...»
    Large arrays of trapped neutral atoms have emerged over the past few years as a promising platform for quantum information processing, combining inherent scalability with high-fidelity control and site-resolved readout. In this talk, I will discuss ongoing work with arrays of Alkaline-earth atoms. These divalent atoms offer unique properties stemming largely from their long-lived metastable states, which form the basis of the optical atomic clock. I will describe the design of a universal quantum processor based on clock qubits and its application in quantum metrology, and I will address the challenge of generating and benchmarking highly entangled states in an analog quantum simulator. First, we realize scalable local control of individual clock qubits, which we utilize to extend the Ramsey interrogation time beyond the coherence time of a single atom [1]. To realize a universal quantum processor, we demonstrate record high-fidelity two-qubit entangling gates mediated by Rydberg interactions, which we combine with dynamical reconfiguration to entangle clock probes in GHZ states and perform Ancilla-based detection [2]. We then use the narrow clock transition to measure and remove thermal excitations of atoms in tweezers (a technique known as erasure conversion) and generate hyperentangled states of motion and spin [3]. In the second part of the talk, I will describe a different approach for generating large scale entangled states in an analog quantum simulator configuration [4], including error mitigation [5] and benchmarking of a 60-atom simulator [6]. Together, these show the great promise and the large variety of experiments accessed with this emerging platform. [1] A. Shaw*, R. Finkelstein*, R. Tsai, P. Scholl, T. Yoon, J. Choi, M. Endres, Multi-ensemble metrology by programming local rotations with atom movements, arxiv:2303.16885, Nature Physics in press (2023). [2] R. Finkelstein, R. Tsai, A. Shaw, X. Sun, M. Endres, A universal quantum processor for entanglement enhanced optical tweezer clocks, in preparation. [3] P. Scholl*, A. Shaw*, R. Finkelstein*, R. Tsai, J. Choi, M. Endres, Erasure cooling, control, and hyper-entanglement of motion in optical tweezers, arXiv:2311.15580 (2023). [4] J. Choi, A. Shaw, I. Madjarov, X. Xie, R. Finkelstein, J. Covey, J. Cotler, D. Mark, H.Y. Huang, A. Kale, H. Pichler, F. Brandão, S. Choi, and M. Endres, Preparing random states and benchmarking with many-body quantum chaos, Nature 617 (2023) [5] P. Scholl, A. Shaw, R. Tsai, R. Finkelstein, J. Choi, M. Endres, Erasure conversion in a high-fidelity Rydberg quantum simulator, Nature 622 (2023). [6] A. Shaw, Z. Chen, J. Choi, D.K. Mark, P. Scholl, R. Finkelstein, A. Elben, S. Choi, M. Endres, Benchmarking highly entangled states on a 60-atom analog quantum simulator, arXiv:2308.07914 (2023).
    הרצאה
  • Date:04חמישיינואר 2024

    Advancing MRI: Sequences and Applications

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    שעה
    09:00 - 10:00
    מיקום
    בניין ע"ש מקס ולילאן קנדיוטי
    מרצהDr. Edna Furman-Haran
    MRI Unit
    מארגן
    המחלקה לתשתיות מחקר מדעי החיים
    צרו קשר
    הרצאה
  • Date:04חמישיינואר 2024

    Special Guest Seminar with Prof. Yegor Bazykin

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    שעה
    10:00 - 11:00
    כותרת
    “Towards understanding and forecasting evolution of pathogenic viruses”
    מיקום
    בניין ארתור ורושל בלפר למחקר ביורפואי
    מרצהProf. Yegor Bazykin
    מארגן
    המחלקה לגנטיקה מולקולרית
    צרו קשר
    הרצאה
  • Date:04חמישיינואר 2024

    Vision and AI

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    שעה
    12:15 - 13:15
    כותרת
    Generative Models for Abstractions
    מיקום
    בניין יעקב זיסקינד
    מרצהYael Vinker
    Tel Aviv University
    מארגן
    המחלקה למדעי המחשב ומתמטיקה שימושית
    צרו קשר
    תקצירShow full text abstract about Humans often express, organize, and develop their thoughts v...»
    Humans often express, organize, and develop their thoughts visually, employing abstract representations like sketches, scribbles, and symbols. These abstract representations range from simple drawings made by kids to structured charts and diagrams made by researchers. Creating such abstract representations comes naturally to humans
    הרצאה
  • Date:04חמישיינואר 2024

    Olfactory information processing: timing, sequences, geometry  and relevance

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    שעה
    12:30 - 13:30
    מיקום
    אולם הרצאות ע"ש גרהרד שמידט
    מרצהProf. Dmitry Rinberg
    Dept of Neuroscience and Physiology Neuroscience Institute NYU
    מארגן
    המחלקה למדעי המוח
    צרו קשר
    הרצאה
  • Date:04חמישיינואר 2024

    Geometric Functional Analysis and Probability Seminar

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    שעה
    13:30 - 14:30
    כותרת
    Two applications of entropy in combinatorics
    מיקום
    בניין יעקב זיסקינד
    מרצהElad Tzalic
    WIS
    מארגן
    המחלקה למתמטיקה
    צרו קשר
    תקצירShow full text abstract about In the talk I will present two applications of entropy in co...»
    In the talk I will present two applications of entropy in combinatorics and give tight bounds for the following problems:

    1. Let $G$ be a graph of maximum degree $d$. For two vertices $x,y$ how many shortest paths from $x$ to $y$ paths can there be in $G$? 

    2. A subset $S subseteq Z^d$ tiles the integer lattice $Z^d$ if one can write $Z^d$ as a union of disjoint translations of $S$. How many subsets of $[n]^d$ tile $Z^d$?

    Based on joint works with Itai Benjamini and Gady Kozma.
    הרצאה
  • Date:07ראשוןינואר 202410רביעיינואר 2024

    quantum error-correction meets high dimensional expansion, complexity hops on the boat

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    שעה
    08:00 - 08:00
    מיקום
    מרכז כנסים על-שם דויד לופאטי
    יושב ראש
    Irit Dinur
    מארגן
    מרכז לנאנופיזיקה עש מוריס וגבריאלה גולדשלגר
    דף בית
    כנסים
  • Date:07ראשוןינואר 2024

    Clore Seminar-Professor Jay Fineberg

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    שעה
    13:15 - 14:15
    כותרת
    The Fundamental Physics of the Onset of Frictional Motion: How do laboratory earthquakes nucleate?
    מיקום
    בניין לפיזיקה על-שם נלה וליאון בנוזיו
    מרצהProf. Jay Fineberg
    מארגן
    מרכז לפיזיקה ביולוגית עש קלור
    צרו קשר
    תקצירShow full text abstract about Recent experiments have demonstrated that rapid rupture fron...»
    Recent experiments have demonstrated that rapid rupture fronts, akin to earthquakes, mediate the transition to frictional motion. Moreover, once these dynamic rupture fronts (“laboratory earthquakes”) are created, their singular form, dynamics and arrest are well-described by fracture mechanics. Ruptures, however, need to be created within initially rough frictional interfaces, before they are able to propagate. This is the reason that “static friction coefficients” are not well-defined; frictional ruptures can nucleate for a wide range of applied forces. A critical open question is, therefore, how the nucleation of rupture fronts actually takes place. We experimentally demonstrate that rupture front nucleation is prefaced by extremely slow, aseismic, nucleation fronts. These nucleation fronts, which are often self-similar, are not described by our current understanding of fracture mechanics. The nucleation fronts emerge from initially rough frictional interfaces at well-defined stress thresholds, evolve at characteristic velocity and time scales governed by stress levels, and propagate within a frictional interface to form the initial rupture from which fracture mechanics take over. These results are of fundamental importance to questions ranging from earthquake nucleation and prediction to processes governing material failure.
    הרצאה
  • Date:07ראשוןינואר 2024

    Chemical and Biological Physics Guest seminar

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    שעה
    15:00 - 15:00
    כותרת
    Static and dynamic biophysical properties of tissue microstructure: Insights from advanced in vivo MRI
    מיקום
    אולם הרצאות ע"ש גרהרד שמידט
    מרצהDr Noam Shemesh
    Champalimaud Research Champalimaud Foundation, Lisbon
    מארגן
    המחלקה לפיזיקה כימית וביולוגית
    צרו קשר
    תקצירShow full text abstract about In living systems, the tissue micro-architecture consists of...»
    In living systems, the tissue micro-architecture consists of myriad cellular and subcellular elements whose density, size/shape distributions, composition, and permeability, endow the tissue with its biological functionality. Dynamic transport mechanisms are further critical for maintaining homeostasis and supporting diverse physiological functions such as action potentials and biochemical signaling. Still, how these biophysical properties change over time and how they couple to activity, remains largely unknown. This is mainly due to the difficulty in mapping these properties in-vivo, longitudinally, and with sufficient specificity. Magnetic Resonance Imaging (MRI), with its capacity for longitudinal studies and wealth of microscopic information leading to multiple contrast mechanisms, provides an outstanding opportunity to decipher these phenomena. In this talk I will discuss our recent advances in diffusion and functional MRI, including novel pulse sequences and biophysical modeling of diffusion processes in the microscopic tissue milieu, which provide, for the first time, the sought-after specificity for density, size, and permeability of particular (sub)cellular elements in tissues. I will show new experiments in rodents proving unique power-laws predicted from biophysical models, revealing axon density and size, as well as cell body density and size, along with validations against ground-truth histology and applications in animal models of disease. Evidence for exchange between the intracellular and extracellular space will also be given, along with a first approach for quantitatively mapping permeability in tissue. I will also introduce correlation tensor MRI (CTI), a new approach for source-separation in diffusional kurtosis, that offers surrogate markers of neurite beading effects, thereby further enhancing specificity, especially in stroke. Finally, I will touch upon dynamic modulations of neural tissue microstructure upon neural activity, and provide evidence for the existence of a neuro-morphological coupling in diffusion-weighted functional MRI signals. Future vistas and potential applications will be discussed.
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  • Date:09שלישיינואר 2024

    Special Clore Seminar - Leenoy Meshulam

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    שעה
    12:45 - 13:45
    כותרת
    Bridging scales in biological systems – from octopus skin to mouse brain
    מיקום
    בניין לפיזיקה על-שם נלה וליאון בנוזיו
    מרצהLeenoy Meshulam
    University of Washington, Seattle
    מארגן
    מרכז לפיזיקה ביולוגית עש קלור
    צרו קשר
    תקצירShow full text abstract about For an animal to perform any function, millions of cells in ...»
    For an animal to perform any function, millions of cells in its body furiously interact with each other. Be it a simple computation or a complex behavior, all biological functions involve the concerted activity of many individual units. A theory of function must specify how to bridge different levels of description at different scales. For example, to predict the weather, it is theoretically irrelevant to follow the velocities of every molecule of air. Instead, we use coarser quantities of aggregated motion of many molecules, e.g., pressure fields. Statistical physics provides us with a theoretical framework to specify principled methods to systematically ‘move’ between descriptions of microscale quantities (air molecules) to macroscale ones (pressure fields). Can we hypothesize equivalent frameworks in living systems? How can we use descriptions at the level of cells and their connections to make precise predictions of complex phenomena My research group will develop theory, modeling and analysis for a comparative approach to discover generalizable forms of scale bridging across species and behavioral functions. In this talk, I will present lines of previous, ongoing, and proposed research that highlight the potential of this vision. I shall focus on two seemingly very different systems: mouse brain neural activity patterns, and octopus skin cells activity patterns. In the mouse, we reveal striking scaling behavior and hallmarks of a renormalization group- like fixed point governing the system. In the octopus, camouflage skin pattern activity is reliably confined to a (quasi-) defined dynamical space. Finally, I will touch upon the benefits of comparing across animals to extract principles of multiscale function in biological systems, and propose future directions to investigate how macroscale properties, such as memory or camouflage, emerge from microscale level activity of individual cells.
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  • Date:09שלישיינואר 2024

    Immunoception: Brain Representation and Control of Immunity

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    שעה
    13:00 - 13:00
    מיקום
    בניין וולפסון למחקר ביולוגי
    מרצהProf. Asya Rolls
    HHMI-Wellcome Scholar Rappaport Institute for Medical Research TECHNION Haifa
    מארגן
    המחלקה למדעי המוח
    צרו קשר
    תקצירShow full text abstract about To function as an integrated entity, the organism must synch...»
    To function as an integrated entity, the organism must synchronize between behavior and physiology. Our research focuses on probing this synchronization through the lens of the brain-immune system interface. The immune system, pivotal in preserving the organism's integrity, is also a sensitive barometer of its overall state. I will discuss the emerging understanding of how the brain represents the state of the immune system and the specific neural mechanisms that enable the brain to orchestrate immune responses.
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  • Date:10רביעיינואר 2024

    Students presentation day

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    שעה
    08:30 - 18:00
    מיקום
    אולם ע"ש דולפי ולולה אבנר
    מרצהProf. Eran Hornstein
    מארגן
    המחלקה לנוירוביולוגיה מולקולרית
    צרו קשר
    הרצאה
  • Date:10רביעיינואר 2024

    Machine Learning and Statistics Seminar

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    שעה
    11:15 - 12:15
    כותרת
    Learning from dependent data and its modeling through the Ising model
    מיקום
    בניין יעקב זיסקינד
    מרצהYuval Dagan
    UC Berkeley
    מארגן
    המחלקה למדעי המחשב ומתמטיקה שימושית
    צרו קשר
    תקצירShow full text abstract about I will present a theoretical framework for analyzing learnin...»
    I will present a theoretical framework for analyzing learning algorithms which rely on dependent, rather than independent, observations. While a common assumption is that the learning algorithm receives independent datapoints, such as unrelated images or texts, this assumption often does not hold. An example is data on opinions across a social network, where opinions of related people are often correlated, for example as a consequence of their interactions. I will present a line of work that models the dependence between such related datapoints using a probabilistic framework in which the observed datapoints are assumed to be sampled from some joint distribution, rather than sampled i.i.d. The joint distribution is modeled via the Ising model, which originated in the theory of Spin Glasses in statistical physics and was used in various research areas. We frame the problem of learning from dependent data as the problem of learning parameters of the Ising model, given a training set that consists of only a single sample from the joint distribution over all datapoints. We then propose using the Pseudo-MLE algorithm, and provide a corresponding analysis, improving upon the prior literature which necessitated multiple samples from this joint distribution. Our proof benefits from sparsifying a model's interaction network, conditioning on subsets of variables that make the dependencies in the resulting conditional distribution sufficiently weak. We use this sparsification technique to prove generic concentration and anti-concentration results for the Ising model, which have found applications beyond the scope of our work.

    Based on joint work with Constantinos Daskalakis, Anthimos Vardis Kandiros, Nishanth Dikkala, Siddhartha Jayanti, Surbhi Goel and Davin Choo.
    הרצאה
  • Date:11חמישיינואר 2024

    Vision and AI

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    שעה
    12:15 - 13:15
    כותרת
    Emergent Visual-Semantic Hierarchies in Image-Text Representations
    מיקום
    בניין יעקב זיסקינד
    מרצהMorris Alper
    Tel Aviv University
    מארגן
    המחלקה למדעי המחשב ומתמטיקה שימושית
    צרו קשר
    תקצירShow full text abstract about While recent vision-and-language models are a powerful tool ...»
    While recent vision-and-language models are a powerful tool for analyzing text and images in a shared semantic space, they do not explicitly model the hierarchical nature of the set of texts which may describe an image. Our work finds emergent understanding of visual-semantic hierarchies in these models, despite not being directly trained for this purpose. Furthermore, we show that foundation models may be better aligned to hierarchical reasoning via a text-only fine-tuning phase, while retaining pretraining knowledge.

    Bio: Morris Alper is a PhD student at the School of Electrical Engineering, Tel Aviv University (TAU). Under the mentorship of Dr. Hadar Averbuch-Elor, he is researching multimodal learning – machine learning applied to tasks involving vision and language and other structured modalities such as 3D. 
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  • Date:11חמישיינואר 2024

    Geometric Functional Analysis and Probability Seminar

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    שעה
    13:30 - 14:30
    כותרת
    Brunn-Minkowski inequalities for sprays on surfaces
    מיקום
    בניין יעקב זיסקינד
    מארגן
    המחלקה למתמטיקה
    צרו קשר
    תקצירShow full text abstract about We propose a generalization of the Minkowski average of two ...»
    We propose a generalization of the Minkowski average of two subsets of a Riemannian manifold, in which geodesics are replaced by an arbitrary family of parametrized curves.

    Under certain assumptions, we characterize families of curves on a Riemannian surface for which a Brunn-Minkowski inequality holds with respect to a given volume form.
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