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September 12, 2014
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Date:27SundayNovember 2022Lecture
Chemical and Biological Physics Guest Seminar
More information Time 11:00 - 11:00Title Universal Principles of Tissues in Health and DiseaseLocation Gerhard M.J. Schmidt Lecture HallLecturer Dr Miri Adler
Yale UniversityOrganizer Department of Chemical and Biological PhysicsContact Abstract Show full text abstract about Our organs and tissues are made of different cell types that...» Our organs and tissues are made of different cell types that communicate with each other in order to achieve joint functions. However, little is known about the universal principles of these interactions. For example, how do cell interactions maintain proper cellular composition, spatial organization and collective division of labor in tissues?
And what is the role of these interactions in tissue-level diseases where the healthy balance in the tissue is disrupted such as excess scarring following injury known as fibrosis?
In this talk, I will discuss my work in developing theoretical frameworks that explore the collective behavior of cells that emerges from cell-cell communication circuits.
I will present work on the cell circuit that controls tissue repair following injury and how it may lead to fibrosis.
I will discuss a new approach to explore how cell interactions can be used to provide symmetry breaking and optimal division of labor in tissues, and how this approach can help to interpret complex patterns in real data.
I will introduce a new concept in complex networks – network hyper-motifs, where we explore how small recurring patterns (network motifs) are integrated within large networks, and how these larger patterns (hyper-motifs) can give rise to emergent dynamic properties.
Finally, I will conclude with future directions that are aimed at revealing principles that unify our understanding of different tissues.
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Date:29TuesdayNovember 2022Lecture
iSCAR seminar
More information Time 09:00 - 10:00Location Max and Lillian Candiotty BuildingLecturer Dr. Shiri Gur-Cohen Organizer Department of Immunology and Regenerative BiologyContact -
Date:29TuesdayNovember 2022Lecture
The importance of being rhythmic: Days and nights of pancreatic islet cells
More information Time 10:00 - 11:00Location Nella and Leon Benoziyo Building for Biological SciencesLecturer Prof. Charna Dibner
Faculty of Medicine, University of Geneva, SwitzerlandOrganizer Department of Biomolecular SciencesContact -
Date:29TuesdayNovember 2022Lecture
Organization of long-term behavior and individuality across developmental timescales
More information Time 12:30 - 12:30Location Gerhard M.J. Schmidt Lecture HallLecturer Prof. Shay Stern
Faculty of Biology TECHNION HaifaOrganizer Department of Brain SciencesContact Abstract Show full text abstract about Animals generate complex patterns of behavior across life th...» Animals generate complex patterns of behavior across life that can be modified over days, months, or even years. Across these long timescales individuals within the same population may show stereotyped behaviors, but also unique behaviors that distinguish them from each other. How are long-term patterns of behavior organized and regulated across development? And what are the underlying processes that establish and modify individual-to-individual behavioral variation?
By utilizing parallel long-term behavioral monitoring at high spatiotemporal resolution of multiple C. elegans individuals across their complete development time we demonstrate temporal regulation of behavioral plasticity by neuromodulators across developmental stages, structuring shared and unique individual responses to early-life experiences. I will further describe our development of unsupervised analyses of individual biases across development based on locomotion trajectory and individual postures which uncovered a large spectrum of individuality types within the isogenic populations. Lastly, I will present preliminary results suggesting that specific neuronal pathways are required to robustly synchronize long-term behavior with development time.
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Date:29TuesdayNovember 2022Lecture
Chemical and Biological Physics Guest seminar
More information Time 14:00 - 14:00Title Playing the evolution game with DNA oligomersLocation Stone Administration BuildingLecturer Prof Tommaso Bellini
Universita degli Studi di MilanoOrganizer Department of Chemical and Biological PhysicsContact Abstract Show full text abstract about We introduce a variant of SELEX in-vitro selection to study ...» We introduce a variant of SELEX in-vitro selection to study the evolution of a population of oligonucleotides starting from a seed of random-sequence DNA 50mers (our evolving individuals) and introducing selectivity by an affinity capture gel formed by beads carrying DNA 20mers of fixed sequence that act as targets (our resources). We PCR amplify the captured strands and proceed to the next generation. Because of the simplicity of the process, we could investigate what plays the role of “fitness" in this synthetic evolution process. We find that, across generations, evolution is first driven by the need of binding to the capture gel, while, on a later stages it appear dominated by the emerging of motifs related to inter-individual interactions. -
Date:30WednesdayNovember 2022Lecture
Chemical Biology Avenues to Illuminate Chromatin Modifications and Protein-protein Interactions
More information Time 14:00 - 15:00Location Gerhard M.J. Schmidt Lecture HallLecturer Dr. Nir Hananya
Department of Chemistry Princeton UniversityOrganizer Department of Chemical and Structural BiologyContact -
Date:30WednesdayNovember 2022Lecture
Deciphering non-neuronal cells contribution to Alzheimer’s disease pathology using high throughput transcriptomic and proteomic methods
More information Time 14:00 - 15:00Lecturer Sedi Medina (PhD Thesis Defense Seminar) on Zoom, Dept of Brain Sciences, Dr. Michal Schwartz Organizer Department of Brain SciencesContact Abstract Show full text abstract about Alzheimer's disease (AD) is a devastating pathology of ...» Alzheimer's disease (AD) is a devastating pathology of the central nervous system (CNS) of unknown etiology which represents the most common neurodegenerative disorder. For decades, AD was perceived as a disease of the neuron alone. However, research advances in recent years have challenged this concept and shed light on the critical roles of non-neuronal cells on the development and progression of AD. In my PhD, I focused on understanding how two non-neuronal cell types - the Astrocytes and Microglia - respond to AD and how they possibly affect pathological processes. Our research identified a unique population of Astrocytes that significantly increased in association with brain pathology, which we termed disease-associated astrocytes (DAAs). This novel population of DAAs appeared at an early disease stage, increased in abundance with disease progression, and was not observed in young or in healthy adult animals. In addition, similar astrocytes appeared in aged wild-type (WT) mice and in aging human brains, suggesting their linkage to genetic and age-related factors. Aging is considered the greatest risk factor for AD, although the mechanism underlying the aging-related susceptibility to AD is unknown. One emerging factor that is involved in biological aging is the accumulation of senescent cells. Cellular senescence is a process in which aging cells change their characteristic phenotype. Under physiological conditions senescent cells can be removed by the immune system, however with aging, senescent cells accumulate in tissues, either due to a failure of effective removal or due to the accelerated formation of senescent cells.
Our data highlight the contribution of non neuronal cells to AD pathogenesis by demonstrating that 1. Overexpression of a specific gene by astrocytes affected the microglia cells' state, leading to a more homeostatic and less reactive microglial phenotype in comparison to the control group. 2. Accumulation of senescent microglia cells was observed in the brain of aged WT mice and AD mouse model (5xFAD), and by applying different therapeutic strategies we managed to observe significant quantitative differences in these cells, followed by a cognitive amelioration.
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Date:30WednesdayNovember 2022Lecture
Mapping chemical indicators in push-pull fields
More information Time 14:00 - 15:00Location Nella and Leon Benoziyo Building for Biological SciencesLecturer Prof. Meredith Schuman
Departments of Geography and Chemistry University of ZurichOrganizer Department of Plant and Environmental SciencesContact -
Date:01ThursdayDecember 2022Lecture
Latest developments in mass spectrometry based proteomics
More information Time 09:00 - 10:00Location Max and Lillian Candiotty BuildingLecturer Dr. Yishai Levin
Protein Profiling Unit, G-INCPMOrganizer Department of Life Sciences Core FacilitiesContact -
Date:01ThursdayDecember 2022Colloquia
Physics Hybrid Colloquium
More information Time 11:15 - 12:30Title Universal Principles of Tissue OrganizationLocation Edna and K.B. Weissman Building of Physical SciencesLecturer Dr. Miri Adler
Yale university, New Haven, Connecticut, U.S.AOrganizer Faculty of PhysicsContact Abstract Show full text abstract about Our organs and tissues are made of different cell types that...» Our organs and tissues are made of different cell types that communicate with each other in order to achieve joint functions. However, little is known about the universal principles of these interactions. For example, how do cell interactions maintain stable cell composition, spatial organization and collective division of labor in tissues?
And what is the role of these interactions in tissue-level diseases where the healthy balance in the tissue is disrupted such as excess scarring following injury known as fibrosis? In this talk, I will discuss my work in developing new theoretical frameworks that explore the collective behavior of cells that emerges from cell-cell interactions.
I will present work on the cell communication circuit that controls tissue repair following injury and how it may lead to fibrosis. I will discuss a new mathematical approach to explore how cell interactions can be used to provide symmetry breaking and optimal division of labor in tissues, and how this approach can help to interpret complex patterns in real high-dimensional data.
I will introduce a new concept in complex networks – network hyper-motifs, where we explore how small recurring patterns (network motifs) are integrated within large networks, and how these larger patterns (hyper-motifs) can give rise to emergent dynamic properties. Finally, I will conclude with future directions that are aimed at revealing principles that unify our understanding of different tissues.
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Date:01ThursdayDecember 2022Lecture
The application of quantitative wood anatomy for investigating the relationship between forest primary productivity and woody biomass growth
More information Time 13:30 - 13:30Location https://weizmann.zoom.us/j/4845901524?pwd=dkYybWIvTXVSaW40YmF2TEVxVFg0UT09Lecturer Dr. Daniele Castagneri
Università degli Studi di Padova Dipartimento Territorio e Sistemi Agro-Forestali (TESAF), ItalyContact -
Date:01ThursdayDecember 2022Lecture
Large scale spatio-temporal organization of brain tumors: from oncostreams to liquid crystals
More information Time 14:00 - 15:00Location Max and Lillian Candiotty BuildingLecturer Prof. Pedro Lowenstein
Richard Schneider Collegiate Professor of Neurosurgery Departments of Neurosurgery, Cell and Developmental Biology, and Biomedical Engineering University of Michigan, Ann Arbor, Michigan, USAOrganizer Dwek Institute for Cancer Therapy ResearchContact -
Date:01ThursdayDecember 2022Lecture
“Investigating the Surface Dynamics of Ions at the Anode-Electrolyte Interface using NMR Spectroscopy”
More information Time 14:00 - 15:00Location Gerhard M.J. Schmidt Lecture HallLecturer Shakked Schwartz
M.Sc. student of Dr. Michal LeskesOrganizer Department of Molecular Chemistry and Materials ScienceContact Abstract Show full text abstract about High-Performance, Rechargeable Li-ion Batteries (LIBs) are k...» High-Performance, Rechargeable Li-ion Batteries (LIBs) are key to the global transition from fossil fuels to renewable energy sources. LIBs utilizing lithium metal as the anode are particularly exciting due to their exceptional energy density and redox potential, yet their advancement is hindered by growth of metallic filaments and unstable surface layers. Efficient cationic transport, which is crucial for battery performance, largely depends on the heterogeneous and disordered interphase formed between the anode and the electrolyte during cycling. Directly observing this interphase as well as the dynamic processes involving it is a great challenge. Here we present an approach to elucidate these dynamic processes and correlate them with the corresponding interfacial chemistry, focusing on the first step of cationic transport: surface adsorption. Employing Dark State Exchange Saturation Transfer (DEST) by 7Li NMR, we were able to detect the exchange of Li-ions between the homogenous electrolyte and the heterogeneous surface layer, highlighting the hidden interface between the liquid and solid environments. This enabled determination of the kinetic and energetic binding properties of different surface chemistries, advancing our understanding of cationic transport mechanisms in Li-ion batteries.
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Date:04SundayDecember 202205MondayDecember 2022Conference
2nd Israeli Flow Cytometry conference
More information Time 08:00 - 08:00Location The David Lopatie Conference CentreChairperson Ziv PoratHomepage -
Date:04SundayDecember 2022Lecture
Origin of compact exoplanetary systems
More information Time 15:00 - 15:00Location Sussman Family Building for Environmental SciencesLecturer Raluca Rufu SwRI, Boulder Organizer Department of Earth and Planetary SciencesContact Abstract Show full text abstract about One of the most surprising discoveries in exoplanet science ...» One of the most surprising discoveries in exoplanet science has been the existence of compact systems of Earth to super-Earth sized planets. These multi-planet systems have nearly circular, coplanar orbits located at distances of only ∼ 0.01 − 0.1 AU, a region devoid of planets in our Solar System. Although compact systems comprise a large fraction of known exoplanetary systems, their origin remains debated.
Common to all prior models of compact system origin is the assumption that infall to the stellar disk ends before planets form. However, there is growing observational, theoretical, and meteoritical evidence of the early growth of mm-sized “pebbles” during the infall phase. We propose that accretion of compact systems occurs during stellar infall. As a cloud core collapses, solids are gradually accumulated in the disk, producing favorable conditions for the formation and survival of close-in planets. A key feature of this model is that the reduced gas-to-solids ratio in the planet accretion region can allow for the formation and survival of compact systems, even with Type-I migration.
Accretion within infall-supplied disks has been studied in the context of gas planet satellite origin. Formation models predict that the total mass of the satellite system during this evolution maintains a nearly constant mass ratio ∼10^−4 compared to the host planet’s mass. The maximum mass ratio of compact exoplanetary systems compared to the stellar mass are similar to those of the giant satellite system, suggesting that accretion of compact systems may be similar to regular satellite formation. -
Date:05MondayDecember 2022Colloquia
Atomic Resolution Structures of Amyloid Fibrils - Ab1-42 , Ab1-40 and b2-microglobulin
More information Time 11:00 - 12:15Location Gerhard M.J. Schmidt Lecture HallLecturer Prof. Robert Guy Griffin
Department of Chemistry Francis Bitter Magnet Laboratory, MITOrganizer Faculty of ChemistryHomepage Contact Abstract Show full text abstract about Many peptides and proteins form amyloid fibrils whose detail...» Many peptides and proteins form amyloid fibrils whose detailed molecular structure is of
considerable functional and pathological importance. For example, amyloid is closely associated
with the neurodegenerative diseases such as Alzheimer’s and Parkinson’s diseases. We review the
macroscopic properties of fibrils and outline approaches to determining their microscopic structure
using magic angle spinning (MAS) NMR with 2D and 3D dipole recoupling experiments involving
spectral assignments and distance measurements. Key to obtaining high resolution is measurement
of a sufficient number of NMR structural restraints (13C-13C and 13C-15N distances per residue). In
addition, we demonstrate the applicability of 1H detection and dynamic nuclear polarization (DNP)
to amyloid structural studies.
We discuss the structures of three different amyloids: (1) fibrils formed by Ab1-42, the toxic
species in Alzheimer’s, using >500 distance constraints; (2) fibrils of Ab1-40, a second form of Ab
with a different structure, and (3) a structure of fibrils forned by b2-microglobulin, the 99 amino
acid protein associated with dialysis related amylosis, using ~1200 constraints. Contrary to
conventional wisdom, the spectral data indicate that the molecules in the fibril are microscopically
well ordered. In addition, the structures provide insight into the mechanism of interaction of the
monoclonal antibody, Aducanumab, directed against Ab amyloid. -
Date:05MondayDecember 2022Lecture
Special Guest Seminar
More information Time 11:00 - 12:00Title "Coding and Noncoding Regulation of Intestinal Inflammation"Location Max and Lillian Candiotty BuildingLecturer Dr. Liraz Galia Organizer Department of Immunology and Regenerative BiologyContact -
Date:06TuesdayDecember 2022Lecture
Selective translation control by 40S ribosomal proteins mRNA binding
More information Time 10:00 - 11:00Location Nella and Leon Benoziyo Building for Biological SciencesLecturer Tal Havkin Solomon
Dept. of Biomolecular Sciences-WISOrganizer Department of Biomolecular SciencesContact -
Date:06TuesdayDecember 2022Lecture
Deep sea gas seeps are hotspots of microbial productivity and biotic interactions
More information Time 11:30 - 12:30Location Nella and Leon Benoziyo Building for Biological SciencesLecturer Dr. Maxim Rubin-Blum
Israel Oceanographic and Limnological ResearchOrganizer Department of Plant and Environmental SciencesContact -
Date:07WednesdayDecember 2022Lecture
Lysosomal regulation of neuronal circuit remodeling
More information Time 10:00 - 11:00Location Arthur and Rochelle Belfer Building for Biomedical ResearchLecturer Prof. Oren Schuldiner
Dept of Molecular Cell Biology WISContact
