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June 06, 2016
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Date:24SundayFebruary 2019Lecture
An insight into symmetry properties of halide perovskites
More information Time 14:00 - 15:00Location Perlman Chemical Sciences BuildingLecturer Prof. Jacky Even
FOTON Institut, CNRS, INSA RennesOrganizer Department of Molecular Chemistry and Materials ScienceContact Abstract Show full text abstract about 3D halide perovskites have emerged as a new class of semicon...» 3D halide perovskites have emerged as a new class of semiconductors, but some basic optoelectronic properties of 3D bulk halide perovskites are still shrouded in mystery. The talk will start from a simplified representation of the halide perovskite lattice allowing to progressively account for various advanced topics. -
Date:24SundayFebruary 2019Lecture
TBA
More information Time 15:00 - 16:00Location Arthur and Rochelle Belfer Building for Biomedical ResearchLecturer Prof. Assaf Rudich
Department of Clinical Biochemistry and Pharmacology, BGU, IsraelContact -
Date:24SundayFebruary 2019Lecture
Halide perovskites: A new class of semiconductors with emergent properties
More information Time 15:00 - 16:00Location Perlman Chemical Sciences BuildingLecturer Prof. Aditya Mohite
Dept. of Chemical and Biomolecular Engineering, Rice UniversityOrganizer Department of Molecular Chemistry and Materials ScienceContact Abstract Show full text abstract about Halide (hybrid) perovskites (HaP) have emerged as a new clas...» Halide (hybrid) perovskites (HaP) have emerged as a new class of semiconductors that truly encompass all the desired physical properties for building optoelectronic and quantum devices such as large tunable band-gaps, large absorption coefficients, long diffusion lengths, low effective mass, good mobility and long radiative lifetimes. In addition, HaPs are solution processed or low-temperature vapor grown semiconductors and are made from earth abundant materials thus making them technologically relevant in terms of cost/performance. As a result, proof-of-concept high efficiency optoelectronic devices such as photovoltaics and LEDs have been fabricated. In fact, photovoltaic efficiencies have sky rocketed to 23% merely in the past five years and are nearly on-par with mono-crystalline Si based solar cells. Such unprecedented progress has attracted tremendous interest among researchers to investigate the structure-function relationship and understand as to what makes Halide hybrid perovskites special?
In my talk, I will attempt to answer some of the key questions and in doing so share the results from our work on HaPs over the past four years in understanding structure induced properties of HaPs. I will also highlight fundamental bottlenecks that exist going forward which present opportunities to create platforms to understand the interplay between light, fields and structure on the properties of perovskite-based materials.
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Date:25MondayFebruary 2019Lecture
Machine Learning Approach to Predict DNA Recombination Events
More information Time 09:00 - 10:00Location Max and Lillian Candiotty BuildingLecturer Dr. Ido Azuri
Bioinformatics UnitOrganizer Department of Life Sciences Core FacilitiesContact -
Date:25MondayFebruary 2019Colloquia
"Augmenting biology through de novo protein design"
More information Time 11:00 - 12:00Location Dolfi and Lola Ebner AuditoriumLecturer Prof. Dek Woolfson
University of BristolOrganizer Faculty of ChemistryContact Abstract Show full text abstract about Protein design—i.e., the construction of entirely new protei...» Protein design—i.e., the construction of entirely new protein sequences that fold into prescribed structures—has come of age: it is possible now to generate a wide variety stable protein folds from scratch using rational and/or computational approaches. A challenge for the field is to move from what have been largely in vitro exercises to protein design in living cells and, in so doing, to augment biology. This talk will illustrate what is currently possible in this nascent field using de novo -helical coiled-coil peptides as building blocks.1
Coiled coils are bundles of 2 or more helices that wrap around each other to form rope-like structures. They are one of the dominant structures that direct natural protein-protein interactions. Our understanding of coiled coils provides a strong basis for building new proteins from the bottom up. The first part of this talk will survey this understanding,1 our design methods,2,3 and our current “toolkit” of de novo coiled coils.4-6
Next, I will describe how the toolkit can be used to direct protein-protein interactions and build complex protein assemblies in bacterial cells. First, in collaboration with the Savery lab (Bristol), we have used homo- and hetero-oligomeric coiled coils as modules in engineered and de novo transcriptional activators and repressors.7 Secondly, with the Warren (Kent) and the Verkade (Bristol) labs, we have engineered hybrids of a de novo heterodimer and a natural component of bacterial microcompartments to form a “cytoscaffold” that permeates E. coli cells.8 This can be used to support the co-localisation of functional enzymes. -
Date:25MondayFebruary 2019Lecture
Soft excitations in glassy systems: Universal statistics, localization and structure-dynamics relations
More information Time 14:15 - 14:15Lecturer Prof. Eran Bouchbinder
WISContact Abstract Show full text abstract about Glassy systems exhibit various universal anomalies compared ...» Glassy systems exhibit various universal anomalies compared to their crystalline counterparts, manifested in their thermodynamic, transport and strongly dissipative dynamical properties. At the heart of understanding these phenomena resides the need to quantify glassy disorder and to identify excitations that are associated with it. In this talk, I will review our recent progress in addressing these basic problems. I will first establish the existence of soft nonphononic excitations in glasses, which has been debated for decades. These low-frequency glassy excitations feature a localization length in space and follow a universal gapless density of states, and they are associated with the generic existence of frustration-induced internal-stresses in glasses. I will then discuss two major implications of these localized excitations: (i) Their relation to soft spots inside glassy structures that can be identified once the spatial distribution of the heat capacity is considered. These allow us to develop predictive structure-dynamics relations in the context of irreversible (plastic) rearrangements under nonlinear driving forces. (ii) Their effect on energy transport, in particular I will show that they lead to deviations from Rayleigh scattering scaling in the attenuation of sound. Open questions will be briefly mentioned. -
Date:26TuesdayFebruary 2019Lecture
From brain organoids to animal chimera: Novel platforms for studying human brain development and disease
More information Time 09:00 - 10:00Location Wolfson Building for Biological ResearchLecturer Dr. Abed A. Mansour
Laboratory of Genetics, The Salk Institute for Biological StudiesOrganizer Department of Brain SciencesContact Abstract Show full text abstract about Due to the immense complexity of the human brain, the study ...» Due to the immense complexity of the human brain, the study of its development, function, and dysfunction during health and disease has proven to be challenging. The advent of patient-derived human induced pluripotent stem cells, and subsequently their self-organization into three-dimensional (3D) brain organoids, which mimics the complexity of the brain's architecture and function, offers an unprecedented opportunity to model human brain development and disease in new ways. However, there is still a pressing need to develop new technologies that recapitulate the long-term developmental trajectories and the complex in vivo cellular environment of the brain. To address this need, we have developed a human brain organoid-based approach to generate a chimeric human/animal brain system that facilitates long-term ana! tomical integration, differentiation, and vascularization in vivo. We also demonstrated the development of functional neuronal networks within the brain organoid and synaptic-cross interaction between the organoid axonal projections and the host brain. This approach set the stage for investigating human brain development and mental disorders in vivo, and run therapeutic studies under physiological conditions. -
Date:26TuesdayFebruary 2019Lecture
Are you stressed? The molecular framework of the nutritional alarmones (p)ppGpp
More information Time 10:00 - 11:00Location Nella and Leon Benoziyo Building for Biological SciencesLecturer Prof. Gert Bange
Philipps Univ. Marburg, Center for Synthetic Microbiology & Dept. of Chemistry, GermanyOrganizer Department of Biomolecular SciencesContact Abstract Show full text abstract about The ability of bacteria to adapt their metabolism to nutrien...» The ability of bacteria to adapt their metabolism to nutrient limitation or environmental changes is essential for survival. The stringent response is a highly conserved mechanism that enables bacteria to respond to nutrient limitations. Central to stringent response is the synthesis of the nutritional alarmones pppGpp and ppGpp (collectively named: (p)ppGpp) that globally reprograms transcription and translation associated to variety of different cellular processes. In Bacillus subtilis and Staphylococcus aureus, three types of alarmone synthases (i.e., RelA, SAS1 and SAS2) have been identified that differ in length and domain composition. These differences might be attributed to their specific roles during stringent response. However, only little information on the molecular details is known. I will present our recent progress towards the structural/mechanistic understanding of the molecular framework of alarmone response. -
Date:26TuesdayFebruary 2019Lecture
Chemical and Biological Physics and Organic Chemistry Seminar
More information Time 11:00 - 12:00Title The Dynamics of Charged Excitons in Electronically and Morphologically Homogeneous Single-Walled Carbon NanotubesLocation Helen and Milton A. Kimmelman BuildingLecturer Prof Michael J. Therien
Duke University Organizer Department of Chemical and Biological PhysicsContact Abstract Show full text abstract about The trion, a three-body charge-exciton bound state, offers u...» The trion, a three-body charge-exciton bound state, offers unique opportunities to simultaneously manipulate charge, spin and excitation in one-dimensional single-walled carbon nanotubes (SWNTs) at room temperature. Effective exploitation of trion quasiparticles requires fundamental insight into their creation and decay dynamics. Such knowledge, however, remains elusive for SWNT trion states, due to the electronic and morphological heterogeneity of commonly interrogated SWNT samples, and the fact that transient spectroscopic signals uniquely associated with the trion state have not been identified. Here length-sorted SWNTs and precisely controlled charge carrier-doping densities are used to determine trion dynamics using femtosecond pump-probe spectroscopy. Identification of the trion transient absorptive hallmark enables us to demonstrate that trions (i) derive from a precursor excitonic state, (ii) are produced via migration of excitons to stationary hole-polaron sites, and (iii) decay in a first-order manner. Importantly, under appropriate carrier-doping densities, exciton-to-trion conversion in SWNTs can approach 100% at ambient temperature. We further show that ultrafast pump-probe spectroscopy, coupled with these fundamental insights into trion formation and decay dynamics, enables a straightforward approach for quantitatively evaluating the extent of optically-driven free carrier generation (FCG) in SWNTs: this work provides fundamental new insights into how quantum yields for optically-driven FCG [Φ(Enn → h+ + e−)] in SWNTs may be modulated as functions of the optical excitation energy and medium dielectric strength. Collectively, these findings open up new possibilities for exploiting trions in SWNT optoelectronics, ranging from photovoltaics, photodetectors, to spintronics. -
Date:26TuesdayFebruary 2019Lecture
A Clockwork Wikipedia: a case study into knowledge and facts in the digital age
More information Time 11:30 - 11:30Location Nella and Leon Benoziyo Building for Biological SciencesLecturer Omer Benjakob and Rona Aviram
Omer Benjakob, Cohn Institute for the History and Philosophy of Science and Ideas, Tel Aviv University and Rona Aviram, Department of Biomolecular Sciences, Weizmann Institute of ScienceOrganizer Department of Plant and Environmental SciencesContact -
Date:26TuesdayFebruary 2019Lecture
Diffusion-Enhanced Photon Inference (DEPI) for accurate retrieval of distance distributions in single-molecule FRET experiments
More information Time 14:00 - 15:00Location Helen and Milton A. Kimmelman BuildingLecturer Prof. Eitan Lerner
HUJIOrganizer Department of Chemical and Structural BiologyContact -
Date:27WednesdayFebruary 2019Lecture
Diamond quantum technologies: magnetic sensing, hyperpolarization and noise spectroscopy
More information Time 11:00 - 12:00Location Perlman Chemical Sciences BuildingLecturer Prof. Nir Bar-Gill
Dept. of Applied Physics, Racah Institute of Physics, HUJIOrganizer Department of Molecular Chemistry and Materials ScienceContact Abstract Show full text abstract about Nitrogen Vacancy (NV) centers in diamond have emerged over t...» Nitrogen Vacancy (NV) centers in diamond have emerged over the past few years as well-controlled quantum systems, with promising applications ranging from quantum information science to magnetic sensing.
In this talk, I will first introduce the NV center system and the experimental methods used for measuring them and controlling their quantum spin dynamics. I will mention the application of magnetic sensing using NVs through the realization of a magnetic microscope [1].
I will then describe our work on nuclear hyperpolarization, potentially relevant for enhanced MRI contrast, and research into open quantum systems and quantum thermodynamics [2].
Finally, I will present related control sequences, which can be used to perform optimized quantum noise spectroscopy, allowing for precise characterization of the environment surrounding a quantum sensor [3].
1. E. FARCHI ET. AL., SPIN 7, 1740015 (2017).
2. HOVAV, Y., NAYDENOV, B., JELEZKO, F. AND BAR-GILL, N., PHYS. REV. LETT. 120, 6, 060405 (2018)
3. Y. ROMACH ET. AL., PHYS. REV. APPLIED 11, 014064 (2019). -
Date:28ThursdayFebruary 2019Lecture
Publishing in Nature Communications
More information Time 10:00 - 11:00Location Perlman Chemical Sciences BuildingLecturer Dr. Bo Liu
Associate Editor, Nature CommunicationsOrganizer Department of Molecular Chemistry and Materials ScienceContact Abstract Show full text abstract about In this talk, I will introduce the Nature Communications jou...» In this talk, I will introduce the Nature Communications journal, the editorial office in Shanghai, the editorial process and insiders’ view on the Nature Communications.
Bo joined Nature Communications in March 2017. Following his undergraduate studies in Zhejiang University, China, he obtained his PhD in Physics at National University of Singapore. He then carried out his postdoctoral research at Graphene Research Center in Singapore and University of Washington. He currently handles manuscripts on solar cells and halide perovskite photophysics. Bo is based in the Shanghai office.
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Date:28ThursdayFebruary 2019Lecture
DLTS defects characterization of process and irradiation induced defects in 4H-SiC
More information Time 11:00 - 12:00Location Perlman Chemical Sciences BuildingLecturer Prof. Mmantsae Diale
Dept. of Physics, University of PretoriaOrganizer Department of Molecular Chemistry and Materials ScienceContact Abstract Show full text abstract about 4H-SiC epitaxial layers were irradiated using various radioa...» 4H-SiC epitaxial layers were irradiated using various radioactive sources and particle accelerators. The electronic properties of induced defects were characterized by means of deep-level transient spectroscopy (DLTS) and Laplace DLTS. This presentation is a review of various observations due to processing various particles used in irradiation of 4H-SiC. From the results it was evident that the same defects were induced by various radiation sources. Irradiation induced the acceptor level of the Z1 center and the donor level of the Z2 center. The concentration of the native defects, which originate from impurities encountered in the growth process increased. DLTS spectra observed after irradiation were exhibited sitting on skewed baselines which in some instances inhibited accurate Laplace-DLTS resolution. -
Date:28ThursdayFebruary 2019Lecture
"DLTS defects characterization of process and irradiation induced defects in 4H-SiC”
More information Time 11:00 - 12:00Location Perlman Chemical Sciences BuildingLecturer Prof. Mmantsae Diale
Dept. Of Physics, University of PretoriaOrganizer Department of Molecular Chemistry and Materials ScienceContact Abstract Show full text abstract about 4H-SiC epitaxial layers were irradiated using various radioa...» 4H-SiC epitaxial layers were irradiated using various radioactive sources and particle accelerators. The electronic properties of induced defects were characterized by means of deep-level transient spectroscopy (DLTS) and Laplace DLTS. This presentation is a review of various observations due to processing various particles used in irradiation of 4H-SiC. From the results it was evident that the same defects were induced by various radiation sources. Irradiation induced the acceptor level of the Z1 center and the donor level of the Z2 center. The concentration of the native defects, which originate from impurities encountered in the growth process increased. DLTS spectra observed after irradiation were exhibited sitting on skewed baselines which in some instances inhibited accurate Laplace-DLTS resolution. -
Date:28ThursdayFebruary 2019Colloquia
Challenges for physical cosmology after Planck
More information Time 11:15 - 12:30Location Edna and K.B. Weissman Building of Physical SciencesLecturer Prof. Matias Zaldarriaga
IAS PrincetonOrganizer Faculty of PhysicsContact Abstract Show full text abstract about I will discuss the current status of physical cosmology afte...» I will discuss the current status of physical cosmology after the latest Cosmic Microwave Background and other measurements. I will discuss the questions that still remain open in the field and how we might go about answering them. I will describe some recent theoretical developments that might contribute useful tools for overcoming some of the challenges that lie ahead.
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Date:28ThursdayFebruary 2019Lecture
Paleoclimatic changes and possible implications for the human occupation in South America
More information Time 13:00 - 14:00Location Helen and Martin Kimmel Center for Archaeological ScienceLecturer Prof Francisco Da Cruz Jr.
Sao Paulo UniversityOrganizer Academic Educational ResearchContact -
Date:28ThursdayFebruary 2019Lecture
Larger than life: Formation and function of bone-resorbing osteoclasts
More information Time 14:00 - 15:00Location Max and Lillian Candiotty BuildingLecturer Prof. Ari Elson Organizer Department of Immunology and Regenerative BiologyContact -
Date:28ThursdayFebruary 2019Lecture
Mn(II) EPR tracks the hydrolysis state and ATP/ADP dependent conformation in yeast Hsp90 chaperone
More information Time 14:00 - 15:00Location Perlman Chemical Sciences BuildingLecturer Dr. Angeliki Giannoulis
Department of Chemical and Biological Physics, WISOrganizer Department of Molecular Chemistry and Materials ScienceContact Abstract Show full text abstract about Hsp90 plays a central role in cell homeostasis by assisting ...» Hsp90 plays a central role in cell homeostasis by assisting folding and maturation of many client proteins. In order to perform this chaperoning activity Hsp90 hydrolyzes ATP, which requires Mg(II) as cofactor and the hydrolysis is coupled to large global conformational changes. Hsp90 is homo-dimeric with each monomer consisting of three consecutive domains (CTD, MD, NTD). The ATPase site is found in each of the two NTDs, while the CTDs constitute the dimerization site. X-ray crystallography and FRET have provided insights on the conformational cycle of Hsp90 which involves transition from a nucleotide-free ‘open’ to a nucleotide-bound ‘closed’ conformation by dimerization of the NTDs. However, there are still open questions on whether the chaperone shifts global conformation as a consequence of hydrolysis.
Here, we investigate the ATPase site and the concomitant conformational changes at various nucleotide-bound states (pre-hydrolysis, intermediate high energy and post- hydrolysis states) in yeast Hsp90 using EPR techniques. To do so, we substituted the Mg(II) cofactor with paramagnetic Mn(II) and performed hyperfine and pulsed dipolar EPR experiments, to probe short and long range interactions, respectively. Specifically, we tracked ATP hydrolysis by exploring the Mn(II) coordination by the nucleotide phosphates using 31P electron nuclear double resonance (ENDOR) spectroscopy. The interaction of the Mn(II) with protein residues in the different hydrolysis states was investigated by 14/15N ELDOR-detected nuclear magnetic resonance (EDNMR). Last, we measured the distance between the two Mn(II) cofactors in each of the monomers using double electron–electron resonance (DEER/PELDOR) spectroscopy. Here, we measured a well-defined Mn(II)-Mn(II) distance of 4.3 nm in the pre-hydrolysis state, which changes both in width and mean distance in the post-hydrolysis state providing experimental evidence to the existence of two different ‘closed’ conformations for the ATP and ADP bound states. Within our approach one can probe both local and global interactions from a single sample via exploitation of intrinsic sites (here Mg(II)->Mn(II)) that can potentially yield new structural insights previously challenging to observe with FRET and EPR using site-specific spin labeling.
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Date:28ThursdayFebruary 2019Lecture
Pelletron meeting - by invitation only
More information Time 16:00 - 17:45Contact
