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אוקטובר 01, 2009

  • Date:14חמישייוני 2012

    "Mass-Informatics: from Peaks to Pathways"

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    שעה
    14:00 - 15:00
    כותרת
    New technologies in high-throughput proteomics has led to the need for developing new bioinformatic tools. The field of mass-informatics will be introduced, its scope will be defined and a variety of web-based tools designed to support research in this exciting and relatively underdeveloped branch of bioinformatics will be demonstrated. Re-analysis (“second-pass science”) will be emphasized, applied particularly to cancer datasets.
    מיקום
    בניין אולמן למדעי החיים
    מרצהManor Askenazi
    Lead Bioinformatics Engineer, Blais Proteomics Center, Harvard Medical School
    מארגן
    המחלקה לתשתיות מחקר מדעי החיים
    צרו קשר
    הרצאה
  • Date:14חמישייוני 2012

    צמד רעים והברירה הטיבעית

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    שעה
    20:30 - 20:30
    מיקום
    אודיטוריום מיכאל סלע
    צרו קשר
    אירועי תרבות
  • Date:16שבתיוני 2012

    הצגה מרוקאית

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    שעה
    21:00 - 21:00
    כותרת
    אל מהבול- המשוגע
    מיקום
    אודיטוריום מיכאל סלע
    צרו קשר
    אירועי תרבות
  • Date:17ראשוןיוני 2012

    Inertial instability of oceanic submesoscale vortices: linear analysis, marginal stability criterion and laboratory experiments

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    שעה
    11:00 - 11:00
    מיקום
    בניין משפחת זוסמן
    מרצהAyah Lazar
    Department of geophysics and planetary sciences Tel Aviv University
    מארגן
    המחלקה למדעי כדור הארץ וכוכבי הלכת
    צרו קשר
    תקצירShow full text abstract about Inertial instability is a possible mechanism for vertical mi...»
    Inertial instability is a possible mechanism for vertical mixing in the submeso-scale ocean, which could transport nutrient rich waters from the deep and effect primary production. The stability of axisymmetric oceanic-like vortices to inertial perturbations is investigated by means of linear stability analysis, taking into account the thickness and the stratification of the thermocline, as well as the vertical eddy viscosity. Numerical analysis reveals that the instability is not sensitive to the vorticity profile if the intensity of the vortex is characterized by the vortex Rossby number (instead of the local normalized vorticity). This allows extending our analytical solutions for the Rankine vortex to a wide variety of oceanic cases, including results such as the analytic dispersion relation, and the marginal stability criterion. This criterion suits oceanic conditions better than the widely used generalized Rayleigh criterion, which is only valid for non-dissipative and non-stratified eddies. Comparison with literature oceanographic data shows that our criterion allows for cases that seem to contradict the common oceanographic hypothesis for inertial instability. For instance, intense submesoscale anticyclones may be stable even with a core region of negative absolute vorticity. We corroborate our findings with large-scale laboratory experiments, performed at the LEGI-Coriolis platform, where we also find a "signature" of the instability on the mean-flow, which could be used in future oceanographic measurements.
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  • Date:17ראשוןיוני 2012

    Parallel, non-convergent, interactions between separate cortical loci underlie perceptual unity: implications for a new view of object recognition

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    שעה
    12:30 - 12:30
    מיקום
    אולם הרצאות ע"ש גרהרד שמידט
    מרצהProf. Moshe Gur
    Dept of Biomedical Engineering, Technion, Haifa
    מארגן
    המחלקה למדעי המוח
    צרו קשר
    תקצירShow full text abstract about Any physical device, including computers, when comparing A t...»
    Any physical device, including computers, when comparing A to B, must send the information to point C. Explanations of brain processing take such a convergence for granted thus generating models relying on increasingly converging hierarchical streams. Such models, however, consistently fail to explain many perceptual phenomena. To see whether the brain, at times, can compare (integrate, process) events that take place at different loci without sending the information to a common target, I performed experiments in three modalities, somato-sensory, auditory, and visual, where 2 different loci at the primary cortex were stimulated. Subjects were able to integrate inputs in time and space affecting small separate cortical loci. The ability to correlate activity between loci was independent of cortical distance up to 2-4 cm. Given the organization of sensory cortex where localized responses in primary cortex do not interact while convergence in downstream areas results in loss of individual stimulus identity and in decreasing selectivity to elementary stimuli, those results cannot be explained by conventional convergence models. We must thus assume a non-converging mechanism whereby two (or more) activated cortical loci can be integrated without sending information via axons into another downstream integrating site. Once we allow for such a non-converging mechanism, many perceptual phenomena can be viewed differently. Object recognition and representation is such a phenomenon that, I suggest, does not result from hierarchical convergence of cells with ever-increasing feature selectivity but rather from parallel interactions between various visual and non-visual areas. If my hypothesis of the brain ability to relate activity taking place at separate loci without using convergence-by-wires is correct, it implies that the brain can use heretofore unconsidered (unknown?) parallel processing and that conventional models, including computer programs, would not be able to capture many brain processes.

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  • Date:17ראשוןיוני 2012

    When cells are inactive in DNA synthesis, viruses R2

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    שעה
    13:00 - 13:00
    מיקום
    בניין ארתור ורושל בלפר למחקר ביורפואי
    מרצהInna Ricardo-Lax
    Yosef Shaul's group, Dept. of Molecular Genetics
    מארגן
    המחלקה לגנטיקה מולקולרית
    צרו קשר
    הרצאה
  • Date:17ראשוןיוני 2012

    האנסמבל האנדלוסי

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    שעה
    20:30 - 20:30
    כותרת
    מהאנדלוסית באהבה
    מיקום
    אודיטוריום מיכאל סלע
    צרו קשר
    אירועי תרבות
  • Date:18שנייוני 2012

    A Landscape of Driver Mutations in Melanoma

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    שעה
    10:00 - 11:00
    מיקום
    בניין ארתור ורושל בלפר למחקר ביורפואי
    מרצהEran Hodis
    Garraway Lab Broad Institute
    דף בית
    צרו קשר
    תקצירShow full text abstract about Despite recent insights into melanoma genetics, systematic s...»
    Despite recent insights into melanoma genetics, systematic surveys for driver mutations are challenged by an abundance of passenger mutations caused by carcinogenic ultraviolet (UV) light exposure. We developed a permutation-based framework to address this challenge, employing mutation data from intronic sequences to control for passenger mutational load on a per-gene basis. Analysis of large-scale melanoma exome data by this approach discovered 6 novel melanoma genes, 3 of which harbored recurrent and potentially targetable mutations. Integration with chromosomal copy number data contextualized the landscape of driver mutations we defined and provided new oncogenic insights in BRAF- and NRAS-driven melanoma and a subset without known NRAS/BRAF mutations. The landscape also clarified a mutational basis for RB and p53 pathway deregulation in this malignancy. Finally, the spectrum of driver mutations provides unequivocal genomic evidence for a direct mutagenic role of UV in melanoma pathogenesis.

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  • Date:18שנייוני 2012

    Brauer-Grothendieck groups and Brauer-Manin sets

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    שעה
    11:00 - 11:00
    מיקום
    בניין יעקב זיסקינד
    מרצהYuri Zarhin
    Pennsylvania State University
    מארגן
    הפקולטה למתמטיקה ומדעי המחשב
    צרו קשר
    הרצאה
  • Date:18שנייוני 2012

    Feedbacks linking growth and proliferation in human cancer cells: application of Ergodic Rate Analysis

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    שעה
    13:30 - 13:30
    מיקום
    בניין ארתור ורושל בלפר למחקר ביורפואי
    מרצהDr. Ran Kafri
    Systems Biology Dept., Harvard Medical School, Boston MA
    מארגן
    המחלקה לגנטיקה מולקולרית
    צרו קשר
    הרצאה
  • Date:18שנייוני 2012

    The role of membrane tension in cell motility

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    שעה
    14:00 - 15:30
    מיקום
    המשכן ללימודי מוסמכים על-שם דוד לופאטי
    מרצהProf. Kinneret Keren
    Physics Department, Technion
    מארגן
    המחלקה לפיזיקה כימית וביולוגית
    צרו קשר
    הרצאה
  • Date:18שנייוני 2012

    Gradual Small-Bias Sample Spaces

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    שעה
    14:30 - 14:30
    מיקום
    בניין יעקב זיסקינד
    מרצהGil Cohen
    מארגן
    הפקולטה למתמטיקה ומדעי המחשב
    צרו קשר
    הרצאה
  • Date:18שנייוני 2012

    גאוות רחובות

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    שעה
    20:30 - 20:30
    כותרת
    תזמורת קלאסיקה רחובות
    מיקום
    אודיטוריום מיכאל סלע
    צרו קשר
    אירועי תרבות
  • Date:19שלישייוני 2012

    NK-mediated immune surveillance

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    שעה
    כל היום
    מיקום
    בניין וולפסון למחקר ביולוגי
    מרצהAdi Sagiv
    מארגן
    המחלקה לביולוגיה מולקולרית של התא
    צרו קשר
    הרצאה
  • Date:19שלישייוני 2012

    From mass spectrometry to cell biology: Identifying the adhesion related Arp2/3-Vinculin complex.

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    שעה
    10:00 - 10:00
    כותרת
    Department of Biological Chemistry - WIS
    מיקום
    בניין וולפסון למחקר ביולוגי
    מרצהDror Chorev
    מארגן
    המחלקה למדעים ביומולקולריים
    צרו קשר
    הרצאה
  • Date:19שלישייוני 2012

    Using Network Algorithms to Integrate "Omic" Data and Reveal Disease Mechanisms

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    שעה
    10:00 - 10:00
    מיקום
    בניין ארתור ורושל בלפר למחקר ביורפואי
    מרצהErnest Fraenkel
    Massachusetts Institute of Technology
    מארגן
    המחלקה לפיזיקה של מערכות מורכבות
    צרו קשר
    תקצירShow full text abstract about Proteomic technologies, next-generation sequencing and RNAi ...»
    Proteomic technologies, next-generation sequencing and RNAi screens are providing increasingly detailed descriptions of the molecular changes that occur in diseases. However, it is difficult to assemble these data into a coherent picture that could lead to new therapeutic insights for several reasons. Despite their power, each of these methods still only captures a small fraction of the cellular response. Moreover, when different assays are applied to the same problem, they often provide apparently conflicting answers. We have developed powerful new approaches to integrate these data to identify small, functionally coherent networks that underlie cellular behavior. I will show that these methods suggest novel therapeutic strategies for the brain tumor glioblastoma multiforme.
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  • Date:19שלישייוני 2012

    "Studying endoderm development by a proteomics method of fractionating heterogeneous populations"

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    שעה
    10:30 - 11:00
    מיקום
    בניין וולפסון למחקר ביולוגי
    מרצהRevital Sharivkin
    Department of Biological Chemistry - WIS
    מארגן
    המחלקה למדעים ביומולקולריים
    צרו קשר
    הרצאה
  • Date:19שלישייוני 2012

    MECHANICS AT THE NANO SCALE

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    שעה
    10:30 - 12:00
    מיקום
    Neve Shalom
    מרצהRON LIFSHITZ
    RAYMOND AND BEVERLY SACKLER SCHOOL OF PHYSICS AND ASTRONOMY TEL AVIV UNIVERSITY
    מארגן
    המחלקה לפיזיקה של חלקיקים ואסטרופיזיקה
    צרו קשר
    תקצירShow full text abstract about Vigorous research in nanoscience and nanotechnology is expec...»
    Vigorous research in nanoscience and nanotechnology is expected to lead to exciting new applications, but considering that the first person to envision science at the nano scale was one of the greatest theoretical physicists of the last century, one should wonder whether we can expect to see any new physics emerging from this activity as well. I will attempt to answer this question by reviewing some exciting developments in the field of nanomechanics, emphasizing my particular interests, ranging from classical nonlinear dynamics, through mesoscopic physics of phonons, to the ultimate limit of QEM (quantum electromechanics).
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  • Date:19שלישייוני 2012

    Asymmetric Grow-Up Equations and their Non-Compact Global Attractors

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    שעה
    11:00 - 11:00
    מיקום
    בניין יעקב זיסקינד
    מרצהNitsan Ben Gal
    מארגן
    הפקולטה למתמטיקה ומדעי המחשב
    צרו קשר
    הרצאה
  • Date:19שלישייוני 2012

    "Selenocysteine as a tool to study protein chemistry"

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    שעה
    11:00 - 11:00
    כותרת
    Organic Chemistry - Departmental Seminar
    מיקום
    בניין הלן ומילטון קימלמן
    מרצהDr. Norman Metanis
    Laboratory of Organic Chemistry, ETH Zürich, Switzerland
    מארגן
    המחלקה לכימיה מולקולרית ולמדע חומרים
    צרו קשר
    תקצירShow full text abstract about Abstract. Selenocysteine is the 21st encoded amino acid, ...»
    Abstract.
    Selenocysteine is the 21st encoded amino acid, found in several selenoproteins, most of which are redox selenoenzymes. Its resemblance to cysteine enabled its use for protein chemical synthesis and mechanistic studies. As they belong to the same group of elements in the periodic table, sulfur and selenium share many features including similar size, electronegativity and major oxidation states. However they differ in other properties, for example, selenium compounds are easier to oxidize and show greater electrophilic character. The selenium atom is also more polarizable than sulfur, so selenols are softer nucleophiles than thiols. Because selenols are substantially more acidic (ΔpKa ~3), selenocysteine is ionized at physiological pH, further enhancing its reactivity relative to cysteine. These properties make selenocysteine a valuable building block for constructing peptides and proteins with novel properties and as a tool for protein synthesis and folding studies. For example, native chemical ligation at selenocysteine followed by selective deselenization will enable chemical synthesis of proteins without protecting groups on cysteine residues. Additionally, targeted insertion of a non-native diselenide cross-link into a cysteine-rich protein can be exploited to direct the early stages of oxidative folding so as to avoid accumulation of unproductive intermediates that limit folding efficiency. This novel strategy could facilitate the production of many difficult-to-fold peptides and proteins. Results from


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