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דצמבר 01, 2014

  • Date:03ראשוןמרץ 2024

    The Clore Center for Biological Physics

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    שעה
    13:15 - 14:30
    כותרת
    A Statistical Physics Approach to Bacteria under Strong Perturbations
    מיקום
    ספרית הפיסיקה על שם נלה וליאון בנוזיו
    מרצהProf. Nathalie Q. Balaban
    Racah Institute of Physics, The Hebrew University
    מארגן
    מרכז לפיזיקה ביולוגית עש קלור
    צרו קשר
    תקצירShow full text abstract about Statistical physics successfully accounts for phenomena invo...»
    Statistical physics successfully accounts for phenomena involving a large number of components using a probabilistic approach with predictions for collective properties of the system. While biological cells contain a very large number of interacting components, (proteins, RNA molecules, metabolites, etc.), the cellular network is understood as a particular, highly specific, choice of interactions shaped by evolution, and therefore difficultly amenable to a statistical physics description. Here we show that when a cell encounters an acute but non-lethal stress, its perturbed state can be modelled as random network dynamics. Strong perturbations may therefore reveal the dynamics of the underlying network that are amenable to a statistical physics description. We show that our experimental measurements of the recovery dynamics of bacteria from a strong perturbation can be described in the framework of physical aging in disordered systems (Kaplan Y. et al, Nature 2021). Further experiments on gene expression confirm predictions of the model. The predictive description of cells under and after strong perturbations should lead to new ways to fight bacterial infections, as well as the relapse of cancer after treatment.
    הרצאה
  • Date:03ראשוןמרץ 2024

    The multimodal regulation of liver glucose metabolism

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    שעה
    15:00 - 16:00
    מיקום
    בניין ארתור ורושל בלפר למחקר ביורפואי
    מרצהDr. Kfir Sharabi
    The Institute of Biochemistry, Food Science, and Nutrition. The Robert H. Smith Faculty of Agriculture, Food and Environment. The hebrew University of Jerusalem.
    צרו קשר
    הרצאה
  • Date:04שנימרץ 2024

    Foundations of Computer Science Seminar

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    שעה
    11:15 - 12:15
    כותרת
    Towards general-purpose program obfuscation via local mixing
    מיקום
    בניין יעקב זיסקינד
    מרצהRan Canetti
    Boston University
    מארגן
    המחלקה למדעי המחשב ומתמטיקה שימושית
    צרו קשר
    תקצירShow full text abstract about We explore the possibility of obtaining general-purpose prog...»
    We explore the possibility of obtaining general-purpose program obfuscation for all circuits by way of making only simple, local, functionality-preserving random perturbations in the circuit structure. Towards this goal, we use the additional structure provided by reversible circuits,  but no additional algebraic structure.


    We start by formulating a new (and relatively weak) obfuscation task regarding the ability to obfuscate  random circuits of  bounded length.  We call such obfuscators  Random Input
    הרצאה
  • Date:05שלישימרץ 2024

    50 Shades of Molecular Modeling in Biomolecular Sciences

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    שעה
    10:00 - 11:00
    מיקום
    בניין לביוכימיה על שם נלה וליאון בנוזיו
    מרצהDr. Sofya Lushchekina
    Dr. Sofya Lushchekina, Dept. of Brain Sciences, Weizmann Institute of Science
    מארגן
    המחלקה למדעים ביומולקולריים
    צרו קשר
    תקצירShow full text abstract about The presentation will cover a spectrum of current applicatio...»
    The presentation will cover a spectrum of current applications of atomistic molecular modeling methods in biomolecular problems. Examples of applications of molecular docking, molecular dynamics, combined quantum mechanics/molecular mechanics and dynamics methods, enhanced sampling, and coarse-graining methods, recent machine learning protein structure prediction methods for studying protein structure and dynamics, protein-ligand and protein-protein interactions, and mechanisms of enzymatic reactions will be considered. The advantages and limitations of different computational methods will be discussed.

    הרצאה
  • Date:05שלישימרץ 2024

    Machine learning for protein functional site annotation and peptide binder design

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    שעה
    14:00 - 15:00
    מיקום
    אולם הרצאות ע"ש גרהרד שמידט
    מרצהDr. Jerome Tubiana
    Blavatnik School of Computer Science, Tel Aviv University
    מארגן
    המחלקה לביולוגיה מבנית וכימית
    צרו קשר
    הרצאה
  • Date:06רביעימרץ 2024

    NEUROMORPHOCHIP ORGANOIDS REVEAL A NOVEL MECHANISM FOR MICROCEPHALY

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    שעה
    10:00 - 11:00
    מיקום
    בניין ארתור ורושל בלפר למחקר ביורפואי
    מרצהProf. Orly Reiner
    Department of Molecular Genetics
    צרו קשר
    הרצאה
  • Date:07חמישימרץ 2024

    Innovation in the Weizmann Genomics Core – next generation technology outreach

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    שעה
    09:00 - 10:00
    מיקום
    בניין ע"ש מקס ולילאן קנדיוטי
    מרצהDr. Hadas Keren-Shaul
    Genomics, Dept. of LSCF / G-INCPM
    מארגן
    המחלקה לתשתיות מחקר מדעי החיים
    צרו קשר
    הרצאה
  • Date:07חמישימרץ 2024

    Geometric Functional Analysis and Probability Seminar

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    שעה
    13:30 - 14:30
    כותרת
    Some limit theorems for U-max statistics with geometric structure
    מיקום
    בניין יעקב זיסקינד
    מרצהKatya Simarova
    St. Petersburg
    מארגן
    המחלקה למתמטיקה
    צרו קשר
    תקצירShow full text abstract about U-max statistics, introduced by Lao and Mayer in 2008, serve...»
    U-max statistics, introduced by Lao and Mayer in 2008, serve as an extreme-value analogue of U-statistics. Natural examples of U-max statistics include the maximum of random variables and the diameters of convex hulls. However, more complex examples exist, such as the maximal perimeter or area of an m-polygon calculated over all possible m-sets of points from a random sample. This talk will focus on specific U-max statistics that possess a geometric structure and derive limit theorems for them, with the Weibull distribution as a limit.
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  • Date:10ראשוןמרץ 2024

    Chemical and Biological Physics Guest seminar

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    שעה
    16:00 - 17:00
    כותרת
    Photodynamics of molecular probes in solutions, cells, and organic surfaces
    מיקום
    בניין פרלמן למדעי הכימיה
    מרצהProf. Oleg Vasyutinskii
    Peter the Great St. Petersburg Polytechnic University
    מארגן
    המחלקה לפיזיקה כימית וביולוגית
    צרו קשר
    תקצירShow full text abstract about The lecture presents recent results obtained in the laborato...»
    The lecture presents recent results obtained in the laboratory of Prof. Oleg Vasyutinskii in the Ioffe Institute, St.Petersburg, Russia along several directions of application of modern laser techniques for investigation of the dynamics of molecules relevant for biology and medicine. The particular directions under discussion will be as follows.
    • Investigation of energy transfer in the excited states of molecular probes in solutions by means of polarized fluorescence spectroscopy.
    • Pump-and-probe polarization modulation spectroscopy for investigation of sub-picosecond dynamics in excited biomolecules.
    • Dynamics of singlet oxygen generation and degradation in solutions and on organic surfaces.

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  • Date:11שנימרץ 2024

    EPS AI discussion seminar - Applications of Self Organizing Maps for the classification of cyclones in the Mediterranean

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    שעה
    15:00 - 15:00
    מיקום
    also via zoom: https://weizmann.zoom.us/j/95890082380?pwd=TnZxc1NoSkxUbjM3SVB0dVpCdVRtZz09
    מארגן
    המחלקה למדעי כדור הארץ וכוכבי הלכת
    צרו קשר
    תקצירShow full text abstract about The use of SOM in atmospheric science has grown popular ove...»
    The use of SOM in atmospheric science has
    grown popular over the recent years. The SOM's
    strength lies in its ability to project the
    continuum of a given dynamical system to an
    easily understood spectrum of dominant states.
    The SOM relies on a neural network, where each
    grid-point in each node (cluster) is assigned with
    a specific weight for a given input parameter. The
    SOM then operates competitively, shifting
    individual members between the nodes to
    minimize internal node variability while
    maximizing the distances between the nodes.
    Here, two novel SOM applications are
    demonstrated, recently used to classify
    Mediterranean cyclones from an upper-level PV
    perspective.
    Each approach yields the potential to enhance the
    understanding of different aspects of
    Mediterranean cyclone's predictability and is
    readily applicable to other regions of interest.
    הרצאה
  • Date:12שלישימרץ 2024

    Travelling waves or sequentially activated modules: mapping the granularity of cortical propagation

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    שעה
    12:30 - 13:30
    מיקום
    אולם הרצאות ע"ש גרהרד שמידט
    מרצהDr. Mark Shein-Idelson
    Dept of Neurobiology, Faculty of Life Sciences Tel Aviv University
    מארגן
    המחלקה למדעי המוח
    צרו קשר
    תקצירShow full text abstract about : Numerous studies have identified travelling waves in the c...»
    : Numerous studies have identified travelling waves in the cortex and suggested they play important roles in brain processing. These waves are most often measured using macroscopic methods that do not allow assessing wave dynamics at the single neuron scale and analyzed using techniques that smear neuronal excitability boundaries. In my talk, I will present a new approach for discriminating travelling waves from modular activation. Using this approach I will show that Calcium dynamics in mouse cortex and spiking activity in turtle cortex are dominated by modular activation rather than by propagating waves. I will then show how sequentially activating two discrete brain areas can appear as travelling waves in EEG simulations and present an analytical model in which modular activation generates wave-like activity with variable directions, velocities, and spatial patterns. I will end by illustrating why a careful distinction between modular and wave excitability profiles across scales will be critical for understanding the nature of cortical computations.
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  • Date:12שלישימרץ 2024

    Seminar for PhD thesis defense

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    שעה
    13:00 - 14:00
    מיקום
    בניין ארתור ורושל בלפר למחקר ביורפואי
    מרצהGabriela Lobinska
    מארגן
    המחלקה לגנטיקה מולקולרית
    צרו קשר
    הרצאה
  • Date:13רביעימרץ 2024

    ABC CHATS: Ronit Harpaz - From Idea to a Startup

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    שעה
    14:00 - 16:00
    כותרת
    An entrepreneur’s story
    מיקום
    בניין על-שם גרשון ואסתר סאגאן
    מרצהRonit Harpaz
    Co-Founder & CEO of Endoron Medical
    צרו קשר
    הרצאה
  • Date:13רביעימרץ 2024

    A brain-computer interface for studying long-term changes of hippocampal neural codes

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    שעה
    15:30 - 16:30
    מיקום
    בניין ארתור ורושל בלפר למחקר ביורפואי
    מרצהLinor Baliti Turgeman-PhD Thesis Defense
    Prof. Yaniv Ziv Lab
    מארגן
    המחלקה למדעי המוח
    צרו קשר
    תקצירShow full text abstract about Brain-computer interfaces (BCI), have important applications...»
    Brain-computer interfaces (BCI), have important applications both in medicine and as a research tool. Typically, BCIs rely on electrode arrays to capture electrical signals, which are then processed by algorithms to translate neural activity into actions of an external device. However, these electrophysiological techniques are often inadequate for tracking large populations of the same neurons over timescales longer than ~1 day. To address this, we developed calcium imaging-based BCI for freely behaving mice, facilitating continuous recording and analysis of specific neuronal populations over extended periods. This BCI allowed investigating the long-term neuronal coding dynamics in the hippocampus, revealing changes in neuronal population activity both within and across days. I am hopeful that this BCI will advance studies on spatial cognition and long-term memory.
    הרצאה
  • Date:14חמישימרץ 2024

    Physics Colloquium

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    שעה
    11:15 - 12:30
    כותרת
    Failed Theories of Superconductivity
    מיקום
    בניין הפיזיקה ע"ש עדנה וק.ב. וייסמן
    מרצהProf. Joerg Schmalian
    KIT, Germany
    מארגן
    המחלקה לפיזיקה של חומר מעובה
    דף בית
    צרו קשר
    תקצירShow full text abstract about The microscopic theory of superconductivity was developed by...»
    The microscopic theory of superconductivity was developed by John Bardeen, Leon N Cooper and J. Robert Schrieffer. It is among the most beautiful and outstanding achievements of modern scientific research. Almost half a century passed between the initial discovery of superconductivity by Kamerlingh Onnes and the theoretical explanation of the phenomenon. During the intervening years the brightest minds in theoretical physics tried and failed to develop a microscopic understanding of the effect. I will discuss some of those unsuccessful attempts to understand superconductivity. This not only demonstrates the extraordinary achievement made by formulating the BCS theory, but also illustrates that mistakes are a natural and healthy part of scientific discourse, and that inapplicable, even incorrect theories can turn out to be interesting and inspiring.
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  • Date:14חמישימרץ 2024

    PhD Thesis Defense by Tomer Milo (Prof. Uri Alon Lab)

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    שעה
    13:00 - 15:00
    כותרת
    Design principles of physiological tissue-level circuits
    מיקום
    בניין וולפסון למחקר ביולוגי
    מרצהTomer Milo (Prof. Uri Alon Lab)
    מארגן
    המחלקה לביולוגיה מולקולרית של התא
    צרו קשר
    הרצאה
  • Date:14חמישימרץ 2024

    The roles of RNA processing in cancer initiation and progression and its modulation for cancer therapy

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    שעה
    14:00 - 15:00
    מיקום
    בניין ע"ש מקס ולילאן קנדיוטי
    מרצהProf. Rotem Karni
    Chair, Department of Biochemistry and Molecular Biology, Hebrew University Faculty of Medicine
    מארגן
    המכון לחקר הטיפול בסרטן עש דואק
    צרו קשר
    הרצאה
  • Date:17ראשוןמרץ 2024

    The Clore Center for Biological Physics

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    שעה
    13:45 - 14:30
    כותרת
    On plants and sounds: plants hearing and emitting airborne sounds
    מיקום
    ספרית הפיסיקה על שם נלה וליאון בנוזיו
    מרצהProf. Lilach Hadany
    Faculty of Life Sciences, Tel-Aviv University
    מארגן
    מרכז לפיזיקה ביולוגית עש קלור
    צרו קשר
    תקצירShow full text abstract about The communication of plants with their environment is crucia...»
    The communication of plants with their environment is crucial for their survival. Plants are known to use light, odors, and touch to communicate with other organisms, including plants and animals. Yet, acoustic communication is almost unexplored in plants, despite its potential adaptive value. This is the topic of the current talk. We have started exploring plant bioacoustics - what plants hear, and what they “say”. I will describe two major projects: in the first we study plant hearing, testing the responses of flowers to sounds of pollinators; in the second we investigate plant sound emission - we have shown that different species of plants emit brief ultrasonic signals, especially under stress. Using AI we can interpret these sounds and identify plant species and stress condition from the sounds. Potential implications of these projects for plant ecology, evolution and agriculture will be discussed.
    הרצאה
  • Date:18שנימרץ 2024

    Atom-Probe Tomography and its Myriad Applications in Chemistry

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    שעה
    11:00 - 12:15
    מיקום
    אולם הרצאות ע"ש גרהרד שמידט
    מרצהProf. David N. Seidman
    McCormick School of Engineering, Northwestern University
    מארגן
    המחלקה לכימיה מולקולרית ולמדע חומרים
    דף בית
    צרו קשר
    תקצירShow full text abstract about atom-probe tomograph (APT) can dissect a nanotip shaped spec...»
    atom-probe tomograph (APT) can dissect a nanotip shaped specimen (radius
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  • Date:18שנימרץ 2024

    Foundations of Computer Science Seminar

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    שעה
    11:15 - 12:15
    כותרת
    Toward Better Depth Lower Bounds: A KRW-like theorem for Strong Composition
    מיקום
    בניין יעקב זיסקינד
    מרצהOr Meir
    University of Haifa
    מארגן
    המחלקה למדעי המחשב ומתמטיקה שימושית
    צרו קשר
    תקצירShow full text abstract about One of the major open problems in complexity theory is provi...»
    One of the major open problems in complexity theory is proving super-logarithmic lower bounds on the depth of circuits. Karchmer, Raz, and Wigderson (Computational Complexity 5(3/4), 1995) suggested approaching this problem by proving that depth complexity of a composition of two functions is roughly the sum of their individual depth complexities. They showed that the validity of this conjecture would imply the desired lower bounds. 

    The intuition that underlies the KRW conjecture is that composition should behave like a "direct-sum problem", in a certain sense, and therefore the depth complexity of the composition should be the sum of the individual depth complexities. Nevertheless, there are two obstacles toward turning this intuition into a proof: first, we do not know how to prove that the composition must behave like a direct-sum problem
    הרצאה

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