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June 06, 2016

  • Date:05TuesdayFebruary 2019

    δ26Mg values of low-T hydrothermal fluids exert new constraints on the oceanic Mg budget and require significant dolomite formation

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    Time
    11:00 - 11:00
    Location
    Sussman Family Building for Environmental Sciences
    LecturerNetta Shalev
    ETH Zurich
    Organizer
    Department of Earth and Planetary Sciences
    Contact
    Lecture
  • Date:05TuesdayFebruary 2019

    Sequencing giants - the wild emmer wheat genome assembly

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    Time
    11:30 - 11:30
    Location
    Nella and Leon Benoziyo Building for Biological Sciences
    LecturerRaz Avni
    The Institute for Cereal Crops Improvement, Tel-Aviv University
    Organizer
    Department of Plant and Environmental Sciences
    Contact
    Lecture
  • Date:05TuesdayFebruary 2019

    The molecular mechanism of Respiratory Syncytial virus assembly

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    Time
    14:00 - 15:00
    Location
    Helen and Milton A. Kimmelman Building
    LecturerDr. Monika Bajorek
    from INRA, France
    Organizer
    Department of Chemical and Structural Biology
    Contact
    Lecture
  • Date:05TuesdayFebruary 2019

    Time-resolved neural activity and plasticity in behaving rodents using high field MRI

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    Time
    14:00 - 14:00
    Location
    Arthur and Rochelle Belfer Building for Biomedical Research
    LecturerDr. Noam Shemesh
    Champalimaud Centre for the Unknown, Lisbon, Portugal
    Organizer
    Department of Brain Sciences
    Contact
    Lecture
  • Date:06WednesdayFebruary 2019

    Developmental Club Series 2018-2019

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    Time
    10:00 - 10:00
    Title
    Adhesion mediated neuron-neuron communication instructs neuronal circuit remodeling
    Location
    Arthur and Rochelle Belfer Building for Biomedical Research
    LecturerProf. Oren Schuldiner
    Organizer
    Department of Molecular Genetics
    Contact
    Lecture
  • Date:06WednesdayFebruary 2019

    Field and Laboratory Studies of Ice Nucleation by Organic Aerosols: Insights on Phase Transitions and Glass Formation

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    Time
    11:00 - 11:00
    Location
    Sussman Family Building for Environmental Sciences
    LecturerProf. Daniel Cziczo
    Earth, Atmospheric and Planetary Sciences Civil and Environmental Engineering Massachusetts Institute of Technology
    Organizer
    Department of Earth and Planetary Sciences
    Contact
    Lecture
  • Date:06WednesdayFebruary 2019

    Extension of in-situ nanoindentation results by (S)TEM graphical data processing

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    Time
    11:00 - 12:00
    Location
    Perlman Chemical Sciences Building
    LecturerDr. Vasily A. Lebedev
    Lomonosov Moscow State University, Moscow
    Organizer
    Department of Molecular Chemistry and Materials Science
    Contact
    AbstractShow full text abstract about Nanomechanical measurements allow us to determine mechanic...»

    Nanomechanical measurements allow us to determine mechanical characteristics of nano- and microobjects, which is required for further calculations of the mechanical parameters of the structures based on them. At the same time, in-situ measurements are carried out in the SEM and TEM chambers. Thus, it is possible to acquire graphic information that can supplement the indentation data.
    In this work, indentation of titania microspheres with different phase composition was tested by MEMS-based Hysitron PI-95 at Zeiss Libra 200MC TEM. Evaluation of the mechanical properties of microspheres in the elastic region was made according to the Hertz model. It turned out that annealing of the amorphous titania leads to an increase in the Young modulus, whereas the hydrothermal treatment reduces it from 27 to 4 Gpa. The differences in the destruction process was demonstrated for these kinds of particles. It has been shown, that hydrothermal treatment of titania microspheres leads to the formation of a reticular internal structure, whereas annealing results in sintering of the internal structure of microspheres.
    In the process of indentation, corresponding videos were also recorded, including the probe approach, indentation, and destruction of the microspheres. In order to process the videos we coded the program based on free Python packages. Using the Digital Image Correlation (DIC) algorithm, relative probe displacements were measured during indentation (Fig. 1a). The results obtained allowed us to clarify the calibration of the movement of the indenter in free sample tests, as well as to determine the drift function in real measurements. These results are important for long-term measurements, in particular creep tests.
    Based on graphical data we were able to determine the evolution of the shape of indented microspheres. During the video processing, areas of individual objects were determined, sizes of contact areas were calculated, and changes in linear dimensions of the deformed objects were determined (Fig. 1b). Therefore, a large amount of quantitative data was obtained from electron microscopy images.


    Fig.1 Illustration of probe displacement determination (a) and the shape evolution analysis
    Lecture
  • Date:07ThursdayFebruary 2019

    “Chemical probes for novel biology” The HTS unit and two stories of methyltransferase inhibitors

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    Time
    09:00 - 10:00
    Location
    Max and Lillian Candiotty Building
    LecturerDr. Haim Barr
    High Throughput Screening Unit G-INCPM
    Organizer
    Department of Life Sciences Core Facilities
    Contact
    Lecture
  • Date:07ThursdayFebruary 2019

    Towards plug and play parallel transmission for 7T human brain MRI with universal pulses

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    Time
    10:00 - 11:00
    Location
    Perlman Chemical Sciences Building
    LecturerDr. Nicolas Boulant
    NeuroSpin, CEA-Saclay, Université Paris-Saclay
    Organizer
    Department of Molecular Chemistry and Materials Science
    Contact
    AbstractShow full text abstract about Parallel transmission has been the most promising approach t...»
    Parallel transmission has been the most promising approach to counteract the radiofrequency (RF) field inhomogeneity problem in MRI at ultra-high field. Despite tremendous progress made by the community for more than a decade, the technology yet has failed to be embraced in routine practice because of a more complex safety management and a cumbersome calibration procedure for each subject in the scanner. After thorough tests and validations to address the former point, universal pulses were proposed a couple of years ago to circumvent the workflow problem in head imaging at 7T. For a given RF coil, they consist of designing, offline, pulse solutions to mitigate the RF field inhomogeneity problem while being robust to intersubject variability, all within explicit hardware and safety constraints. This talk will present the latest sequence and pulse developments incorporating these solutions, now covering 3D (GRE, MPRAGE, TSE, MP-FLAIR, DIR, 3D-EPI) and 2D (GRE, MB-EPI) sequences with first routine results for fMRI (resting-state HCP-style, localizer paradigm) and ongoing clinical studies (Multiple Sclerosis), thereby making parallel transmission one step closer to clinical routine and at zero cost for the user. Perhaps interestingly, to reach the desired versatility and simplicity, some solutions were inspired from solid-state NMR methods. To date the proposed universal pulses cumulate tests on around 50 volunteers and across 4 sites. They have never failed to return brain images virtually free of B1+ artefacts at 7T.
    Lecture
  • Date:07ThursdayFebruary 2019

    Chemical and Biological Physics Guest Seminar

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    Time
    11:00 - 11:00
    Title
    Interactions of hydrophobic nanoparticles with biological membrane
    Location
    Perlman Chemical Sciences Building
    LecturerProf. Matej Daniel
    Czech Technical University, Prague
    Organizer
    Department of Chemical and Biological Physics
    Contact
    AbstractShow full text abstract about Small hydrophobic gold nanoparticles with a diameter lower t...»
    Small hydrophobic gold nanoparticles with a diameter lower than the membrane thickness can form clusters or uniformly distribute within the hydrophobic core of the bilayer. The coexistence of two stable phases (clustered and dispersed) indicates the energy barrier between nanoparticles. It could be shown, that the forces between the nanoparticles embedded in the biological membrane could be either attractive or repulsive, depending on the mutual distance between them.
    Lecture
  • Date:07ThursdayFebruary 2019

    The Biomass Distribution on Earth

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    Time
    11:15 - 12:30
    Location
    Edna and K.B. Weissman Building of Physical Sciences
    LecturerProf. Ron Milo
    Department of Plant and Environmental Sciences Weizmann Institute of Science
    Organizer
    Faculty of Physics
    Contact
    AbstractShow full text abstract about A census of the biomass on Earth is key for understanding th...»
    A census of the biomass on Earth is key for understanding the structure and dynamics of the biosphere. Yet, a quantitative, global view of how the biomass of different taxa compare with each other is still lacking. In this study, we harness recent advances in global sampling techniques to assemble the overall biomass composition of the biosphere, establishing the first census of the biomass of all the kingdoms of life.
    Colloquia
  • Date:07ThursdayFebruary 2019

    Vision and Robotics Seminar

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    Time
    12:15 - 13:30
    Title
    Using visual and auditory cues for audio enhancement
    Location
    Jacob Ziskind Building
    LecturerTavi Halperin
    The Hebrew University of Jerusalem
    Organizer
    Faculty of Mathematics and Computer Science , Department of Computer Science and Applied Mathematics , Department of Mathematics
    Contact
    Lecture
  • Date:07ThursdayFebruary 2019

    Frustrations in the treatment of Ovarian Cancer

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    Time
    14:00 - 15:00
    Title
    Special Guest Seminar
    Location
    Max and Lillian Candiotty Building
    LecturerProf. Uziel Beller
    Shaare Zedek Medical Center Jerusalem & Assuata Ashdod
    Organizer
    Department of Immunology and Regenerative Biology
    Contact
    Lecture
  • Date:07ThursdayFebruary 2019

    Pelletron meeting - by invitation only

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    Time
    16:00 - 17:45
    Contact
    Lecture
  • Date:10SundayFebruary 2019

    Chemical and Biological Physics Guest Seminar

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    Time
    09:30 - 09:30
    Title
    Computational Modeling of Large Biomolecular Systems: Methodology and a Case ‎Study of the Smartest Molecule (an NMDA Receptor in the Brain)
    Location
    Perlman Chemical Sciences Building
    LecturerDr. Anton V. Sinitskiy
    Stanford University
    Organizer
    Department of Chemical and Biological Physics
    Contact
    AbstractShow full text abstract about In this talk targeted at a wide audience of chemists, I will...»
    In this talk targeted at a wide audience of chemists, I will start with a story about the ‘smartest’ molecule. Neuronal NMDA receptors, in my opinion, deserve this name, because they play the key role in the molecular mechanisms of learning, memory formation, and abstract reasoning. Also, malfunctioning NMDA receptors are involved in numerous neurological disorders, including schizophrenia, epilepsy, and Alzheimer’s disease. NMDA receptors are complicated and rich in behavior, and even the most
    up-to-date experimental methods yield only a fragmented picture of these biomolecules. How do their known structures relate to their biologically relevant functional states? Through what mechanisms do post-translational modifications (specifically, glycosylation) affect their physiological properties? Computational modeling offers unique insights into these questions, and I will outline my work in this field. Simulating NMDA receptors is a formidable task, though. In the second half of my talk, I will discuss how advances in methodology could facilitate studies of such large molecular and biomolecular systems. Specifically, I will focus on the concepts of coarse-graining, Markov state modeling, and mixed-resolution hybrid modeling, highlighting my work in this field [including ultra-coarse-grained modeling, and quantum mechanics / coarse-grained molecular mechanics (QM/CG-MM) approach]. Finally, I will briefly touch on the possible use of machine learning and deep learning networks in molecular modeling. In general, further advances in the theory and methodology of modeling will result in new opportunities for studying complex phenomena, such as learning and memory, with unprecedented resolution.
    Lecture
  • Date:10SundayFebruary 2019

    Uncertainty in aquatic ecosystems: living with it, managing with it…

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    Time
    11:00 - 11:00
    Location
    Sussman Family Building for Environmental Sciences
    LecturerGideon Gal
    Kinneret Limnological Laboratory, (KLL)
    Organizer
    Department of Earth and Planetary Sciences
    Contact
    Lecture
  • Date:10SundayFebruary 2019

    Self-assemblies of designed B-sheet peptides as hydrogels, coatings and drug delivery nanoparticles

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    Time
    11:00 - 12:00
    Location
    Perlman Chemical Sciences Building
    LecturerProf. Hanna Rapaport
    Department of Biotechnology Engineering and the Ilse Katz Institute for Nanoscale Science and Technology, Ben-Gurion University of the Negev
    Organizer
    Department of Molecular Chemistry and Materials Science
    Contact
    AbstractShow full text abstract about Peptides in -sheet conformations have been developed in our...»
    Peptides in -sheet conformations have been developed in our lab in a bottom up fashion towards various biomedical applications. Hydrogels of -sheet peptides will be briefly introduced and the talk will then focus on peptide coatings for induced osseointegration of titanium implants and peptides enhanced nanoparticles for intracellularly targeted drug delivery.
    Lecture
  • Date:10SundayFebruary 2019

    Recovering exact conditions at semi-local DFT cost to mitigate energy and density errors for transition metal chemistry


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    Time
    14:00 - 15:00
    Location
    Perlman Chemical Sciences Building
    LecturerProf. Heather Kulik
    Dept. Chemical Engineering, MIT
    Organizer
    Department of Molecular Chemistry and Materials Science
    Contact
    AbstractShow full text abstract about Accurate prediction of electronic properties of open-shell t...»
    Accurate prediction of electronic properties of open-shell transition metal complexes is essential for materials design and catalysis. Nevertheless, the properties that make these materials and molecules so compelling also make them extremely challenging to study accurately with any computational model. Although density functional theory (DFT) remains the method of choice for its balance of speed and accuracy in computational screening, semi-local approximations in density functional theory (DFT), such as the generalized gradient approximation (GGA), suffer from many electron self-interaction errors that causes them to predict erroneous spin states and geometries, barrier heights and dissociation energies, and orbital energies, to name a few. I will outline our recent efforts to both understand and correct these errors with a focus on predictive modeling of transition metal chemistry : i) We describe how common approximations to recover the derivative discontinuity (i.e., DFT+U and global or range separated hybrids) affect the density properties of transition metal complexes and correlated solids with respect to exact references, ii) We demonstrate recovery of the flat-plane condition that is a union of the requirement of piecewise linearity with electron removal or addition as well as unchanged energy when changing the spin of an electron in isoenergetic orbitals. We accomplish this at no computational cost over semi-local DFT by building from scratch our judiciously-modified DFT (jmDFT) functionals designed to oppose errors inherent in semi-local functionals. We show the connection to but divergence of these functional forms from hybrid expressions and standard DFT+U explain why both common approximations increase static correlation errors. We also present fundamental expressions for determining these parameters, mitigating any empiricism in the method. iii) Finally, time permitting, I will describe our efforts to overcome DFT inaccuracies through the development of data-driven structure-method relationships, including in artificial neural networks that can predict sensitivity of spin-state ordering in transition metal complexes to changes in the exchange-correlation functional.



    Lecture
  • Date:11MondayFebruary 2019

    "Bio-organic systems for Electrocatalytic CO2 recycling"

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    Time
    11:00 - 12:15
    Location
    Perlman Chemical Sciences Building
    LecturerProf. Serdar Sariciftci
    Linz-Organic Photovoltaic Cells institute in thy Johannes Kepler University of Linz
    Organizer
    Faculty of Chemistry
    Contact
    Colloquia
  • Date:11MondayFebruary 2019

    Chemical tools for manipulating the topology of polymer networks

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    Time
    11:00 - 12:00
    Location
    Helen and Milton A. Kimmelman Building
    LecturerProf. Jeremiah A. Johnson
    Department of Chemistry, Massachusetts Institute of Technology
    Organizer
    Department of Molecular Chemistry and Materials Science
    Contact
    Lecture

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