Targeted Metabolomics Publications

  1. Barak-Gavish N., Dassa B., Kuhlisch C., Nussbaum I., Brandis A., Rosenberg G., Avraham R. & Vardi A. (2023). Bacterial lifestyle switch in response to algal metabolites.  eLife. 2023 Jan 24 , 12 .
  2. Rousset F., Yirmiya E., Nesher S., Brandis A., Mehlman T., Itkin M., Malitsky S., Millman A., Melamed S. & Sorek R. (2023). A conserved family of immune effectors cleaves cellular ATP upon viral infection.  Cell. 2023 Aug 17 , 186 (17):3619-3631.e13.
  3. Goldsmith M., Barad S., Peleg Y., Albeck S., Dym O., Brandis A., Mehlman T. & Reich Z. (2022). The identification and characterization of an oxalyl-CoA synthetase from grass pea ( Lathyrus sativus L.).  RSC Chemical Biology. 2022 Mar 9 , 3 (3):320-333.
  4. Millman A., Melamed S., Leavitt A., Doron S., Bernheim A., Hör J., Garb J., Bechon N., Brandis A., Lopatina A., Ofir G., Hochhauser D., Stokar-Avihail A., Tal N., Sharir S., Voichek M., Erez Z., Ferrer J. L. M., Dar D., Kacen A., Amitai G. & Sorek R. (2022). An expanded arsenal of immune systems that protect bacteria from phages.  Cell Host and Microbe. 2022 Nov 9 , 30 (11):1556-1569.e5.
  5. Brekelmans J., Dickman M. M., Verma S., Arba-Mosquera S., Goldschmidt R., Goz A., Brandis A., Berendschot T. T., Saelens I. E., Marcovich A. L., Scherz A. & Nuijts R. M. (2022). Excimer laser-assisted corneal epithelial pattern ablation for corneal cross-linking.  Acta Ophthalmologica. 2022 Jun , 100 (4):422-430.
  6. Allouche-Arnon H., Khersonsky O., Tirukoti N. D., Peleg Y., Dym O., Albeck S., Brandis A., Mehlman T., Avram L., Harris T., Yadav N. N., Fleishman S. J. & Bar-Shir A. (2022). Computationally designed dual-color MRI reporters for noninvasive imaging of transgene expression.  Nature biotechnology. 2022 Jul , 40 (7):1143-1149.
  7. Gnainsky Y., Itkin M., Mehlman T., Brandis A., Malitsky S. & Soen Y. (2022). Protocol for studying microbiome impact on host energy and reproduction in Drosophila.  STAR Protocols. 2022 Jun 17 , 3 (2).
  8. Tal N., Millman A., Stokar Avihail A., Fedorenko T., Leavitt A., Melamed S., Yirmiya E., Avraham C., Brandis A., Mehlman T., Amitai G. & Sorek R. (2022). Bacteria deplete deoxynucleotides to defend against bacteriophage infection.  Nature Microbiology. 2022 Aug , 7 (8):1200-1209.
  9. Ben Ami S. D., Ehre D., Ushakov A., Mehlman T., Brandis A., Alikin D., Shur V., Kholkin A., Lahav M. & Lubomirsky I. (2022). Engineering of Pyroelectric Crystals Decoupled from Piezoelectricity as Illustrated by Doped α-Glycine.  Angewandte Chemie - International Edition. 2022 Dec 5 , 61 (49).
  10. Koh E., Brandis A. & Fluhr R. (2022). Plastid and cytoplasmic origins of 1O2-mediated transcriptomic responses.  Frontiers in Plant Science. 2022 Nov 7 , 13 .
  11. Serger E., Luengo-Gutierrez L., Chadwick J. S., Kong G., Zhou L., Crawford G., Danzi M. C., Myridakis A., Brandis A., Bello A. T., Müller F., Sanchez-Vassopoulos A., De Virgiliis F., Liddell P., Dumas M. E., Strid J., Mani S., Dodd D. & Di Giovanni S. (2022). The gut metabolite indole-3 propionate promotes nerve regeneration and repair.  Nature. 2022 Jul 21 , 607 (7919):585-592.
  12. Goldsmith M., Barad S., Knafo M., Savidor A., Ben-Dor S., Brandis A., Mehlman T., Peleg Y., Albeck S., Dym O., Ben-Zeev E., Barbole R. S., Aharoni A. & Reich Z. (2022). Identification and characterization of the key enzyme in the biosynthesis of the neurotoxin β-ODAP in grass pea.  The journal of Biological chemistry. 2022 May 1 , 298 (5).
  13. Noronha A., Belugali Nataraj N., Sang Lee J., Zhitomirsky B., Oren Y., Oster S., Lindzen M., Mukherjee S., Will R., Ghosh S., Simoni-Nieves A., Verma A., Chatterjee R., Borgoni S., Robinson W., Sinha S., Brandis A., Kerr D. L., Wu W., Sekar A., Giri S., Chung Y., Drago-Garcia D., Danysh B. P., Lauriola M., Fiorentino M., Ardizzoni A., Oren M., Blakely C. M., Ezike J., Wiemann S., Parida L., Bivona T. G., Aqeilan R. I., Brugge J. S., Regev A., Getz G., Ruppin E. & Yarden Y. (2022). AXL and Error-Prone DNA Replication Confer Drug Resistance and Offer Strategies to Treat EGFR-Mutant Lung Cancer.  Cancer Discovery. 2022 Nov 1 , 12 (11):2666-2683.
  14. Fortus D., Ofek-Geva E., Vinker-Shuster M., Mehlman T., Malitsky S., Brandis A. & Yeshayahu Y. (2021). The Onset of Puberty and Adolescents Motivation to Learn Science.  Adolescent Health. 2021, .
  15. Fluhr L., Mor U., Kolodziejczyk A. A., Dori-Bachash M., Leshem A., Itav S., Cohen Y., Suez J., Zmora N., Moresi C., Ayalon N., Valdés-Mas R., Molina S., Hornstein S., Karbi H., Kviatcovsky D., Livne A., Bukimer A., Eliyahu-Miller S., Metz A., Brandis A., Mehlman T., Kuperman Y., Tsoory M., Stettner N., Harmelin A., Shapiro H. & Elinav E. (2021). Gut microbiota modulates weight gain in mice after discontinued smoke exposure.  Nature. 2021 Dec 23 , 600 (7890):713-719.
  16. Bartok O., Pataskar A., Nagel R., Laos M., Goldfarb E., Hayoun D., Levy R., Körner P., Kreuger I. Z. M., Champagne J., Zaal E. A., Bleijerveld O. B., Huang X., Kenski J., Wargo J., Brandis A., Levin Y., Mizrahi O., Alon M., Lebon S., Yang W., Nielsen M. M., Stern-Ginossar N., Altelaar M., Berkers C. R., Geiger T., Peeper D. S., Olweus J., Samuels Y. & Agami R. (2021). Anti-tumour immunity induces aberrant peptide presentation in melanoma.  Nature. 2021 Feb 11 , 590 (7845):332-337.
  17. Dierks D., Garcia-Campos M. A., Uzonyi A., Safra M., Edelheit S., Rossi A., Sideri T., Varier R. A., Brandis A., Stelzer Y., van Werven F., Scherz-Shouval R. & Schwartz S. (2021). Multiplexed profiling facilitates robust m6A quantification at site, gene and sample resolution.  Nature Methods. 2021 Sept 3 , 18 (9):1060-1067.
  18. Tal N., Morehouse B. R., Millman A., Stokar-Avihail A., Avraham C., Fedorenko T., Yirmiya E., Herbst E., Brandis A., Mehlman T., Oppenheimer-Shaanan Y., Keszei A. F., Shao S., Amitai G., Kranzusch P. J. & Sorek R. (2021). Cyclic CMP and cyclic UMP mediate bacterial immunity against phages.  Cell. 2021 Nov 11 , 184 (23):5728-5739.e16.
  19. Even A., Morelli G., Turchetto S., Shilian M., Bail R. L., Laguesse S., Krusy N., Brisker A., Brandis A., Inbar S., Chariot A., Saudou F., Dietrich P., Dragatsis I., Brone B., Broix L., Rigo J., Weil M. & Nguyen L. (2021). ATP-citrate lyase promotes axonal transport across species.  Nature Communications. 2021 Dec 1 , 12 (1).
  20. Koh E., Cohen D., Brandis A. & Fluhr R. (2021). Attenuation of cytosolic translation by RNA oxidation is involved in singlet oxygen-mediated transcriptomic responses.  Plant, Cell and Environment. 2021 Nov , 44 (11):3597-3615.