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February 21, 2016
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Date:19TuesdayJanuary 2021Lecture
"Harnessing the CRISPR toolbox to engineer biology"
More information Time 10:00 - 11:00Location Via Zoom: https://weizmann.zoom.us/j/93358772888?pwd=Z1ZIeWs3NWdkMXYyK1RVbjQvNUxVUT09Lecturer Prof. Randall Jeffrey Platt
Dept. of Biosystems Science and Engineering (D-BSSE)at ETH ZurichOrganizer Department of Biomolecular SciencesContact Abstract Show full text abstract about Summary: Molecular technologies enabling the high throughpu...» Summary:
Molecular technologies enabling the high throughput interrogation of genetic elements fuels our capacity to understand and control complex biological systems. With current methodologies used in the field of biomedicine the rate at which genes are being associated with biological and disease processes has drastically outstripped the pace at which their causality can be tested and understood. In this lecture you will hear about how we are harnessing the CRISPR toolbox to engineer biology and bridge this gap.
Bio:
Randy Platt studied biomedical engineering and chemistry at the University of Utah in Salt Lake City, Utah. In 2011 he obtained an MPhil from Imperial College London in material science and in 2015 a PhD from MIT in biological engineering. After a postdoctoral fellowship joint between MIT, Harvard University, and the Broad Institute he was appointed as a tenure-track assistant professor in the Department of Biosystems Science and Engineering (D-BSSE) at ETH Zurich and the Department of Chemistry at the University of Basel in October 2016.
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Date:19TuesdayJanuary 2021Lecture
The Cortical-Hippocampal Interplay during Episodic Memory Retrieval in Humans
More information Time 10:00 - 11:00Lecturer Yitzhak Norman (PhD Thesis Defense)
Prof. Rafi Malach Lab, Department of NeurobiologyOrganizer Department of Brain SciencesContact Abstract Show full text abstract about One of the most remarkable functions of the human brain is t...» One of the most remarkable functions of the human brain is the ability to recall a personal experience from the past and reenact it vividly in our mind, in a way that allows us to reflect upon the memory and derive from it relevant information that can guide our future behavior. My doctoral research explored the neuronal mechanisms that enable this core cognitive function in the human brain. Using rare electrophysiological recordings obtained from neurosurgical patients for clinical purposes I investigated and characterized the complex bidirectional interactions that occur between the hippocampus and the cerebral cortex during retrieval of conscious, reportable memories.
My results are twofold. I first show that 1-2 seconds before the onset of individual recollections the hippocampus elicits transient electrical oscillations known as Sharp Wave Ripples (SWRs). Such oscillatory events have been extensively studied in animal models in recent years and were shown to reflect massive synchronization events during which millions of pyramidal neurons on the hippocampus output pathway fire simultaneously. My results demonstrate that the SWR events are selective to memory contents and play a major role in coordinating the re-activation of hippocampal-neocortical memory representations during retrieval. I show a tight coupling between SWR events and visual cortex activation, and reveal a massive peri-ripple activation of the default mode network. Second, I show that the cortex uses a flexible, goal-directed, "baseline shift" mechanism that allows the imposition of predefined boundaries on spontaneous recollections. Specifically, the results demonstrate that when free recall is limited to a particular category, the average neuronal activity level in cortical sites that represent the targeted category is steadily and significantly enhanced throughout the free recall period. Such steady-state excitatory enhancement is likely to introduce a category-specific bias in the cortical input arriving at the hippocampus, which may facilitate the reactivation of memory traces belonging to the targeted category and not others.
Altogether, the results place hippocampal SWRs firmly as a central mechanism in the retrieval of human declarative memory. They demonstrate a central role for SWRs in coordinating the hippocampus-cortical dialogue during recollection and point to a flexible "baseline shift" mechanism that can account for the remarkable ease and precision by which we can constrain this dialogue to support retrieval goals.
Zoom link to join: https://weizmann.zoom.us/j/92146113977?pwd=VmhuMEhBcTRYZDNWMVJ4bGJrR0lIdz09
Meeting ID: 92146113977
Password: 803220
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Date:19TuesdayJanuary 2021Lecture
In situ identification of 48-56.0 million old proteins in chert with unusually high stiffness
More information Time 11:00 - 11:00Lecturer Filipe Natalio
Scientific Archaeology Unit Weizmann Institute of ScienceOrganizer Department of Earth and Planetary SciencesContact -
Date:19TuesdayJanuary 2021Lecture
Getting to the root of plant drought response: the role of lipoxygenases and singlet oxygen
More information Time 11:30 - 12:30Title Dept. Seminar via ZoomLocation https://weizmann.zoom.us/j/99241697059?pwd=L3UxVnNIUk14TWRQNThxVDBVYlZNdz09 Password: 352487Lecturer Dr. Tomer Chen
Prof. Robert Fluhr's lab. Dept. of Plant and Environmental SciencesOrganizer Department of Plant and Environmental SciencesContact -
Date:19TuesdayJanuary 2021Lecture
What can fishes teach us about the brain?
More information Time 12:30 - 12:30Lecturer Prof. Ronen Segev
Life Sciences Department Ben Gurion University of the NegevOrganizer Department of Brain SciencesContact Abstract Show full text abstract about Fishes have diverged in evolution from the mammalian linage ...» Fishes have diverged in evolution from the mammalian linage some 450 million years ago and as a result fishes’ brain structure is different from the fundamental design of the mammalian, reptilian and avian brains. This raises the question what can we learn from the ability of fishes to solve different tasks. I will discuss how aspects navigation is implemented in the goldfish brain.
Zoom link:
https://weizmann.zoom.us/j/96608033618?pwd=SEdJUkR2ZzRBZ3laUUdGbWR1VFJTdz09
Meeting ID: 966 0803 3618
Password: 564068
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Date:19TuesdayJanuary 2021Lecture
New perspectives on interlayer excitons in two-dimensional heterostructures
More information Time 18:00 - 19:00Lecturer Dr. Ouri Karni Organizer Department of Molecular Chemistry and Materials ScienceContact Abstract Show full text abstract about Zoom: https://weizmann.zoom.us/j/96278790117?pwd=T1ZjaH...»
Zoom: https://weizmann.zoom.us/j/96278790117?pwd=T1ZjaHlxQjlEQkFIbE12UDJCazNwZz09
Two-dimensional layered (van-der-Waals) heterostructures, made by stacking different monolayers of semiconducting transition-metal dichalcogenides, have been drawing much attention as versatile platforms for studying fundamental solid-state phenomena and for designing opto-electronic devices. Interlayer excitons, electron-hole pairs that bind to each other across the interlayer spacing in these heterostructures, hold promise as key tools for probing the interlayer interface structure, and for exploring many-body interactions(1). With long lifetimes, spin polarization, and electric tunability, interlayer excitons are also promising as flexible information carriers(2, 3). However, they were mostly studied through the scope of their visible light emission, missing essential properties such as their momentum-space image or their absorption strength, necessary for rigorous study of their many-body interactions and potential applications.
In this talk I will present our recent studies aimed at measuring such unknown interlayer exciton properties and their dependence on the heterostructure. I will show a new interlayer exciton in WSe2/MoS2 heterostructures which we discovered based on its light emission in infra-red wavelengths, rather than in the visible range(4). I will demonstrate its properties as inferred from its optical interrogation. Then, I will present the quantitative measurement of the elusive optical absorption spectrum of interlayer excitons using electric-field modulation spectroscopy, essential for coherent coupling of light to those excitons(5). Finally, I will reveal how time- and angle-resolved photoemission spectroscopy is used to image the interlayer exciton in momentum-space, yielding its size and binding energy, so far inaccessible through optics(5).
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Date:24SundayJanuary 2021Lecture
PhD Thesis defense - Orel Mizrahi
More information Time 11:00 - 12:00Location Zoom: https://weizmann.zoom.us/j/99419142270?pwd=Wis5anpzZlZ1dXZXV2FjNGdQZjhiZz09 Meeting ID: 994 1914 2270 Password: 966778Lecturer Orel Mizrahi Organizer Department of Molecular GeneticsContact -
Date:24SundayJanuary 2021Lecture
Exploring the potential of Angiosperm resurrection plants for food security in Africa
More information Time 13:00 - 14:00Title SAERI - Sustainability and Energy Research Initiative seminar seriesLocation via zoomLecturer Prof. Jill M. Farrant
Dept. of Molecular & Cell Biology, Uni. of Cape Town, South African Dept. of Science and Innovation & National Research Foundation South African Research Chair in Systems Biology Studies on Plant Desiccation Tolerance for Food Security. Department of Molecular and Cell Biology, University of Cape Town, South AfricaOrganizer Weizmann School of ScienceContact -
Date:25MondayJanuary 2021Colloquia
Toward autonomous “artificial cells"
More information Time 11:00 - 12:00Location https://weizmann.zoom.us/j/98063488104?pwd=N3VqTC9sU1A4RHVDZ1dhOGVxbU1iUT09Lecturer Prof. Roy Bar-Ziv
Department of Chemical & Biological Physics, WISOrganizer Faculty of ChemistryContact Abstract Show full text abstract about We study the assembly of programmable quasi-2D DNA compartme...» We study the assembly of programmable quasi-2D DNA compartments as “artificial cells” from the individual cellular level to multicellular communication. We will describe recent progress toward autonomous synthesis and assembly of cellular machines, synchrony, pattern formation, fuzzy decision-making, memory transactions, and electric field manipulation of gene expression. -
Date:25MondayJanuary 202128ThursdayJanuary 2021Conference
The Adaptive Brain - Inaugural Weizmann-Columbia Brain Symposium
More information Time 16:00 - 20:30Location Zoom WebinarChairperson Rony PazHomepage -
Date:26TuesdayJanuary 2021Lecture
SARS-CoV-2 suppresses IFNβ production, but not signaling, mediated by NSP1, 5, 6, 15, ORF6 and ORF7b
More information Time 10:00 - 10:30Location Via Zoom: https://weizmann.zoom.us/j/93358772888?pwd=Z1ZIeWs3NWdkMXYyK1RVbjQvNUxVUT09Lecturer Dr. Maya Shemesh
Dept. of Biomolecular Sciences-WISOrganizer Department of Biomolecular SciencesContact Abstract Show full text abstract about Type I Interferons (IFN-Is) are anti-viral response cytokine...» Type I Interferons (IFN-Is) are anti-viral response cytokines, and are major candidate for treatment of SARS-CoV-2. In our study we investigated the mechanism in which SARS-CoV-2 evades early stage anti-viral response by inactivation of IFN-I production. To account for different possible cellular checkpoints in which the virus may ultimately block IFN production, we applied three cellular assays: promoter activity, IFN mRNA levels, and IFNβ secretion. SARS-CoV-2 genes NSP1, NSP5, NSP6, NSP15, ORF6 and ORF7b severely disrupted IFNβ production. Conversely, individual genes and live SARS-CoV-2 infected cells failed to block Interferon stimulated gene activation in response to added IFN-I, despite an inhibition of STAT1-phosphorylation mediated by NSP1. Our findings support a multi-gene process in which SARS-CoV-2 blocks IFN-production at early stages of infection, yet infected individuals can still benefit from the anti-viral effects of added IFN-Is. -
Date:26TuesdayJanuary 2021Lecture
SARS-CoV-2 RBD in vitro evolution follows contagious mutation spread
More information Time 10:30 - 11:00Location Via Zoom: https://weizmann.zoom.us/j/93358772888?pwd=Z1ZIeWs3NWdkMXYyK1RVbjQvNUxVUT09Lecturer Dr. Jiri Zahradnik
Dept. of Biomolecular Sciences-WISOrganizer Department of Biomolecular SciencesContact Abstract Show full text abstract about SARS-CoV-2 more contagious mutations are spreading rapidly. ...» SARS-CoV-2 more contagious mutations are spreading rapidly. In vitro affinity maturation of the receptor-binding domain (RBD) towards ACE2, resulted in more contagious mutations, S477N, E484K, and N501Y to be among the first selected, including the British and South African variants. Plotting the binding affinity against the incidence of different RBD mutations in the population supported correlation between the two. Further in vitro evolution provides guidelines towards potentially new evolving mutations with even higher infectivity.
For more details see Preprint: https://www.biorxiv.org/content/10.1101/2021.01.06.425392v2 -
Date:26TuesdayJanuary 2021Lecture
Marine electrical imaging reveals novel freshwater transport mechanism in Hawaiʻi
More information Time 11:00 - 11:00Location https://weizmann.zoom.us/j/7621438333?pwd=c0lpdlQzYSthellXWG9rZnM0ZDRFZz09Lecturer Eric Attias
Hawaiʻi Institute of Geophysics and Planetology University of HawaiʻiOrganizer Department of Earth and Planetary SciencesContact Abstract Show full text abstract about Conventional hydrogeologic models employed to compute ocean ...» Conventional hydrogeologic models employed to compute ocean island sustainable yields and aquifer storage neglect the nearshore and onshore submarine environment’s complexity. However, the onshore aquifer at the island of Hawaiʻi exhibits a significant volumetric discrepancy between high-elevation freshwater recharge and coastal discharge. This study presents a novel transport mechanism of freshwater moving from onshore to onshore via a multilayer formation of water-saturated layered basalts with interbedded low-permeability layers of ash/soil, as revealed by marine-controlled source electromagnetic (CSEM) imaging. We propose that this newly discovered transport mechanism of fresh water may be the governing mechanism in other volcanic islands. Additionally, our water column CSEM imaging detects multiple vertical freshwater plumes extending from the seafloor to the ocean surface. These findings provide valuable information to elucidate hydrogeologic and oceanographic rocesses affecting biogeochemical cycles in coastal waters worldwide. -
Date:26TuesdayJanuary 2021Lecture
Viral impacts in the marine world: from single-cells to planktonic ecosystems
More information Time 11:30 - 12:30Title Dept. Seminar via ZoomLocation https://weizmann.zoom.us/j/92760289710?pwd=SEROejJMWUtBQU5PMGZ5Ri9Ud0hNZz09 Password: 740144Lecturer Dr. Flora Vincent
Prof. Assaf Vardi's lab., Dept. of Plant and Environmental SciencesOrganizer Department of Plant and Environmental SciencesContact -
Date:26TuesdayJanuary 2021Lecture
Layers of primary visual cortex as a window into internal models about predicted and simulated environments
More information Time 12:30 - 13:30Lecturer Prof. Lars Muckli
Visual and Cognitive Neurosciences, Director of fMRI at the Centre for Cognitive Neuroimaging, Glasgow, ScotlandOrganizer Department of Brain SciencesContact Abstract Show full text abstract about Normal brain function involves the interaction of internal p...» Normal brain function involves the interaction of internal processes with incoming sensory stimuli. We have created a series of brain imaging experiments (using 7T fMRI) that sample internal models and feedback mechanisms in early visual cortex. Primary visual cortex (V1) is the entry-stage for cortical processing of visual information. We can show that there are 3 information counter-streams concerned with: (1) retinotopic visual input, (2) top-down predictions of internal models generated by the brain, and (3) top-down imagery acting independently of the perception and prediction loop. Internal models amplify and disamplify incoming information, but there is also mental imagery not interfering with visual perception. Our results speak to the conceptual framework of predictive coding. Healthy brain function will strike a balance between the precision of prediction and prediction update based on prediction error. Our results incorporate state of the art, layer-specific ultra-high field fMRI and other imaging techniques. We argue that fMRI with its capability of measuring dendritic energy consumption is sensitive to activity in different parts of layer spanning neurons, enriching our computational understanding of counter stream brain mechanisms.
Zoom link to join:
https://weizmann.zoom.us/j/96608033618?pwd=SEdJUkR2ZzRBZ3laUUdGbWR1VFJTdz09
Meeting ID: 966 0803 3618
Password: 564068
Host: Dr. Rita Schmidt rita.schmidt@weizmann.ac.il tel: 9070
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Date:27WednesdayJanuary 2021Lecture
"The use of animals in drug development: challenges and opportunities"
More information Time 11:00 - 11:00Title Zoom link: https://weizmann.zoom.us/j/99576968476?pwd=aVNtc0Q1N0ZYUk1rU3N2VlJhZ3IvQT09Lecturer Dr. Moran Grossman
Nonclinical Safety Project Leader, Teva Pharmaceuticals.Contact -
Date:28ThursdayJanuary 2021Lecture
“Low-field MRI: new perspectives”
More information Time 09:30 - 10:30Lecturer Prof. Najat Salameh Organizer Department of Molecular Chemistry and Materials ScienceContact Abstract Show full text abstract about Zoom: Link: https://weizmann.zoom.us/j/98957854014?pwd=ZTEya...» Zoom: Link: https://weizmann.zoom.us/j/98957854014?pwd=ZTEyazd6cThxUE90L3ZJbkdkbkFWQT09
passcode: 159170
Magnetic Resonance Imaging (MRI) is a non-ionizing, non-invasive imaging modality that has become key in modern medicine. Its high value resides in a broad range of soft tissue contrasts or biomarkers that can be tuned to enable the identification and follow-up of many pathophysiological or metabolic processes. Such developments were made possible thanks to almost forty years of hardware and software development, yet access to MRI nowadays remains exclusive, bound to radiology suites in hospitals, and restricted to less than half of the world population. This limited accessibility is mostly due to its one-fits-all design and its prerequisites for intense magnetic field strength that impact cost, siting infrastructure, and clinical compatibility. One way to improve accessibility in MRI is to lower the magnetic field strength that will naturally influence cost, siting, and compatibility. Further, lowering the field strength can translate in smaller footprint designs which geometry and contrast could purposely be tuned to certain targeted applications. Indeed, relaxation mechanisms are known to change with the surrounding magnetic field, with larger T1 dispersion at low field that have for the most part been unexplored.
Although very promising, many challenges arise linked to the lower intrinsic nuclear spin polarization inherent to low field technologies, calling for original and innovative approaches to reach clinical relevance. During this seminar, Prof. Najat Salameh will describe those challenges and possible solutions by presenting the current landscape of low field imaging and recent progress made at the Center for Adaptable MRI Technology, Basel University.
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Date:28ThursdayJanuary 2021Lecture
Studying resistance in cancer
More information Time 14:00 - 15:00Lecturer Prof. Getz Gad
Broad Institute, MGH Cancer CenterOrganizer Dwek Institute for Cancer Therapy ResearchContact -
Date:31SundayJanuary 2021Lecture
Live imaging of chromatin distribution reveals novel principles of nuclear architecture and chromatin compartmentalization”.
More information Time 11:00 - 12:00Lecturer Prof. Talila Volk
Dept. Molecular Genetics, WISOrganizer Department of Molecular Chemistry and Materials ScienceContact Abstract Show full text abstract about Zoom Link: https://weizmann.zoom.us/j/91657907719?pwd=M2...» Zoom Link:
https://weizmann.zoom.us/j/91657907719?pwd=M2F2WlRKWGRuUHlxN0tNWFhZVUVzZz09
The genetic material of live organisms is packed and stored within the nucleus. It contains DNA wrapped around the nucleosomes, which then organized into chromatin fibers that partition into distinct compartments, which eventually fill the entire nucleus. Chromatin three dimensional topology is essential for proper accessibility of transcription factors, which control tissue-specific gene expression programs. Whereas chromatin partition into specific domains has been described in cells in culture conditions, information regarding chromatin 3 dimensional distribution in tissues within live organisms is still missing. We have imaged the chromatin in muscle fibers of live, intact Drosophila larvae, and revealed its 3 dimensional structure. Our results demonstrate novel 3 dimensional architecture of the chromatin which is evolutionary conserved, and has important implications on the regulation of gene expression. -
Date:31SundayJanuary 2021Lecture
Simulating Chemistry from Atoms to Devices: Next-Generation Reactive Molecular Dynamics
More information Time 14:00 - 15:00Lecturer Dr. David Furman
Dept. Chemistry, University of CambridgeOrganizer Department of Molecular Chemistry and Materials ScienceContact Abstract Show full text abstract about Zoom Link: https://weizmann.zoom.us/j/97142508810?pwd=S2...» Zoom Link:
https://weizmann.zoom.us/j/97142508810?pwd=S2Voc3BMYnh6RmFTYUxLbUFjQXRGZz09
Until recently, computational studies of chemical reactivity were exclusively dealt with using quantum mechanical approaches, which severely limited the system's size and accessible time scales for simulation.
To bypass the need to solve Schrodinger's equation, and facilitate large-scale simulations for up to millions of atoms, both accurate and efficient models of the chemical bond have to be constructed.
I will present recent advances in the field of modeling chemical reactions in large-scale, complex systems (i.e. "dirty chemistry"), with a particular focus on ReaxFF reactive molecular dynamics.
Prominent applications from recent years will be highlighted, including: (a) discovery of the underlying operation principles of a novel laser-based mass-spectrometry technique,
and (b) prediction of the surprising chemistry that leads to the formation of several key precursors to biomolecules of life upon the collapse of a "primordial bubble".
Finally, I will present a new ReaxFF formulation that opens exciting new avenues for orders of magnitude more accurate simulations for long time scales.
