Bioinformatics: LSCF Publications

  1. Sever L., Radomir L., Strim K., Weiner A., Shchottlender N., Lewinsky H., Barak A. F., Friedlander G., Ben-Dor S., Becker-Herman S. & Shachar I. (2019). SLAMF9 regulates pDC homeostasis and function in health and disease.  Proceedings of the National Academy of Sciences of the United States of America. 2019 Aug , 116 (33):16489-16496.
  2. Cohen G., Hadas R., Stefania R., Pagoto A., Ben-Dor S., Kohen F., Longo D., Elbaz M., Dekel N., Gershon E., Aime S. & Neeman M. (2019). Magnetic Resonance Imaging Reveals Distinct Roles for Tissue Transglutaminase and Factor XIII in Maternal Angiogenesis during Early Mouse Pregnancy.  Arteriosclerosis, Thrombosis, and Vascular Biology. 2019 Aug , 39 (8):1602-1613.
  3. Kohen R., Barlev J., Hornung G., Stelzer G., Feldmesser E., Kogan K., Safran M. & Leshkowitz D. (2019). UTAP: User-friendly Transcriptome Analysis Pipeline.  BMC Bioinformatics. 2019 Mar , 20 .
  4. Sehrawat U., Koning F., Ashkenazi S., Stelzer G., Leshkowitz D. & Dikstein R. (2019). Cancer-Associated Eukaryotic Translation Initiation Factor 1A Mutants Impair Rps3 and Rps10 Binding and Enhance Scanning of Cell Cycle Genes.  Molecular and Cellular Biology. 2019 Jan , 39 (3).
  5. Rosenwasser S., Sheyn U., Frada M. J., Pilzer D., Rotkopf R. & Vardi A. (2019). Unmasking cellular response of a bloom-forming alga to viral infection by resolving expression profiles at a single-cell level.  PLoS Pathogens. 2019 Apr , 15 (4).
  6. Gal H., Lysenko M., Stroganov S., Vadai E., Youssef S. A., Tzadikevitch-Geffen K., Rotkopf R., Biron-Shental T., de Bruin A., Neeman M. & Krizhanovsky V. (2019). Molecular pathways of senescence regulate placental structure and function.  EMBO Journal. 2019 Sept , 38 (18).
  7. Machluf Y., Farkash R., Rotkopf R., Fink D. & Chaiter Y. (2019). Asthma phenotypes and associated comorbidities in a large cohort of adolescents in Israel.  Journal of Asthma. 2019 Apr , .
  8. Kohen R., Barlev J., Hornung G., Stelzer G., Feldmesser E., Kogan K., Safran M. & Leshkowitz D. (2019). UTAP: User-friendly Transcriptome Analysis Pipeline.  BMC Bioinformatics. 2019 Mar , 20 .
  9. Sehrawat U., Koning F., Ashkenazi S., Stelzer G., Leshkowitz D. & Dikstein R. (2019). Cancer-Associated Eukaryotic Translation Initiation Factor 1A Mutants Impair Rps3 and Rps10 Binding and Enhance Scanning of Cell Cycle Genes.  Molecular and Cellular Biology. 2019 Jan , 39 (3).
  10. Zhivin-Nissan O., Dassa B., Morag E., Kupervaser M., Levin Y. & Bayer E. A. (2019). Unraveling essential cellulosomal components of the (Pseudo)Bacteroides cellulosolvens reveals an extensive reservoir of novel catalytic enzymes.  Biotechnology for Biofuels. 2019 May , 12 .
  11. Paudel I., Gerbi H., Zisovich A., Sapir G., Ben-Dor S., Brumfeld V. & Klein T. (2019). Drought tolerance mechanisms and aquaporin expression of wild vs. cultivated pear tree species in the field.  Environmental and Experimental Botany. 2019 Nov , 167 .
  12. Kohen R., Barlev J., Hornung G., Stelzer G., Feldmesser E., Kogan K., Safran M. & Leshkowitz D. (2019). UTAP: User-friendly Transcriptome Analysis Pipeline.  BMC Bioinformatics. 2019 Mar , 20 .
  13. Lapidoth G., Parker J., Prilusky J. & Fleishman S. J. (2019). AbPredict 2: a server for accurate and unstrained structure prediction of antibody variable domains.  Bioinformatics. 2019 May , 35 (9):1591-1593.
  14. Phitsuwan P., Morais S., Dassa B., Henrissat B. & Bayer E. A. (2019). The Cellulosome Paradigm in An Extreme Alkaline Environment.  Microorganisms. 2019 Sept , 7 (9).
  15. Anbalagan S., Blechman J., Gliksberg M., Gordon L., Rotkopf R., Dadosh T., Shimoni E. & Levkowitz G. (2019). Robo2 regulates synaptic oxytocin content by affecting actin dynamics.  eLife. 2019 Jun , 8 .
  16. Srivastava S., Nataraj N. B., Sekar A., Ghosh S., Bornstein C., Drago-Garcia D., Roth L., Romaniello D., Marrocco I., David E., Gilad Y., Lauriola M., Rotkopf R., Kimchi A., Haga Y., Tsutsumi Y., Mirabeau O., Surdez D., Zinovyev A., Delattre O., Kovar H., Amit I. & Yarden Y. (2019). ETS Proteins Bind with Glucocorticoid Receptors: Relevance for Treatment of Ewing Sarcoma.  Cell Reports. 2019 Oct , 29 (1):104-117.
  17. Weill U., Cohen N., Fadel A., Ben-Dor S. & Schuldiner M. (2019). Protein Topology Prediction Algorithms Systematically Investigated in the Yeast Saccharomyces cerevisiae.  BioEssays. 2019 Jul , .
  18. Zelnik I. D., Rozman B., Rosenfeld-Gur E., Ben-Dor S. & Futerman A. H. (2019). A Stroll Down the CerS Lane.  . 2019, :49-63.
  19. Sehrawat U., Koning F., Ashkenazi S., Stelzer G., Leshkowitz D. & Dikstein R. (2019). Erratum: Cancer-Associated Eukaryotic Translation Initiation Factor 1A Mutants Impair Rps3 and Rps10 Binding and Enhance Scanning of Cell Cycle Genes (vol 39, e00441-18, 2019).  Molecular and Cellular Biology. 2019 Mar , 39 (6).
  20. Lebow M. A., Schroeder M., Tsoory M., Holzman-Karniel D., Mehta D., Ben-Dor S., Gil S., Bradley B., Smith A. K., Jovanovic T., Ressler K. J., Binder E. B. & Chen A. (2019). Glucocorticoid-induced leucine zipper "quantifies" stressors and increases male susceptibility to PTSD.  Translational Psychiatry. 2019 Jul , 9 .