Bioinformatics: LSCF Publications

  1. Levanon D., Negreanu V., Lotem J., Bone K. R., Brenner O., Leshkowitz D. & Groner Y. (2014). Transcription factor Runx3 regulates interleukin-15-dependent natural Killer cell activation.  Molecular and Cellular Biology. 2014 Mar , 34 (6):1158-1169.
  2. Leven I., Azuri I., Kronik L. & Hod O. (2014). Inter-layer potential for hexagonal boron nitride.  Journal of Chemical Physics. 2014 Mar 14 , 140 (10).
  3. Kotkamp K., Kur E., Wendik B., Polok B. K., Ben-Dor S., Onichtchouk D. & Driever W. (2014). Pou5f1/Oct4 promotes cell survival via direct activation of mych expression during zebrafish gastrulation.  PLoS ONE. 2014 Mar 18 , 9 (3).
  4. Hirsch A., Azuri I., Addadi L., Weiner S., Yang K., Curtarolo S. & Kronik L. (2014). Infrared absorption spectrum of brushite from first principles.  Chemistry of Materials. 2014 May 13 , 26 (9):2934-2942.
  5. Frada M. J., Schatz D., Farstey V., Ossolinski J. E., Sabanay H., Ben-Dor S., Koren I. & Vardi A. (2014). Zooplankton may serve as transmission vectors for viruses infecting algal blooms in the ocean.  Current Biology. 2014 Nov 3 , 24 (21):2592-2597.
  6. Ma X., Shatil-Cohen A., Ben-Dor S., Wigoda N., Perera I. Y., Im Y. J., Diminshtein S., Yu L., Boss W. F., Moshelion M. & Moran N. (2014). Do phosphoinositides regulate membrane water permeability of tobacco protoplasts by enhancing the aquaporin pathway?.  Planta. 2014 Mar , 241 (3):741-755.
  7. Ma X., Shatil-Cohen A., Ben-Dor S., Wigoda N., Perera I. Y., Im Y. J., Diminshtein S., Yu L., Boss W. F., Moshelion M. & Moran N. (2014). Do phosphoinositides regulate membrane water permeability of tobacco protoplasts by enhancing the aquaporin pathway?.  Planta. 2014 Mar , 241 (3):741-755.
  8. Hamberg Y., Ruimy-Israeli V., Dassa B., Barak Y., Lamed R., Cameron K., Fontes C., Bayer E. & Fried D. (2014). Elaborate cellulosome architecture of Acetivibrio cellulolyticus revealed by selective screening of cohesin-dockerin interactions.  PeerJ. 2014, 2014 (1).
  9. Shalev M., Aviram R., Adamovich Y., Kraut-Cohen J., Shamia T., Ben-Dor S., Golik M. & Asher G. (2014). The PXDLS linear motif regulates circadian rhythmicity through protein-protein interactions.  Nucleic Acids Research. 2014 Oct 29 , 42 (19):11879-11890.
  10. Shoshani O., Ravid O., Massalha H., Aharonov A., Ovadya Y., Pevsner-Fischer M., Leshkowitz D. & Zipori D. (2014). Cell isolation induces fate changes of bone marrow mesenchymal cells leading to loss or alternatively to acquisition of new differentiation potentials.  Stem Cells. 2014 Aug , 32 (8):2008-2020.
  11. Artzi L., Dassa B., Borovok I., Shamshoum M., Lamed R. & Bayer E. A. (2014). Cellulosomics of the cellulolytic thermophile Clostridium clariflavum.  Biotechnology for Biofuels. 2014 Jul 1 , 7 (1).
  12. Rappaport N., Twik M., Nativ N., Stelzer G., Bahir I., Stein T. I., Safran M. & Lancet D. (2014). MalaCards: A Comprehensive automatically-mined Database of human diseases.  Current Protocols in Bioinformatics. 2014 Sept 8 , 2014 :1.24.1-1.24.19.
  13. Schatz D., Shemi A., Rosenwasser S., Sabanay H., Wolf S. G., Ben-Dor S. & Vardi A. (2014). Hijacking of an autophagy-like process is critical for the life cycle of a DNA virus infecting oceanic algal blooms.  NEW PHYTOLOGIST. 2014 Dec 1 , 204 (4):854-863.
  14. Rosenwasser S., Mausz M. A., Schatz D., Sheyn U., Malitsky S., Aharoni A., Weinstock E., Tzfadia O., Ben-Dor S., Feldmesser E., Pohnert G. & Vardi A. (2014). Rewiring host lipid metabolism by large viruses determines the fate of Emiliania huxleyi, a bloom-forming alga in the ocean.  Plant Cell. 2014 Jul , 26 (6):2689-2707.
  15. Leshkowitz D., Horn-Saban S., Parmet Y. & Feldmesser E. (2013). Differences in microRNA detection levels are technology and sequence dependent.  Rna-A Publication Of The Rna Society. 2013 Apr , 19 (4):527-538.
  16. Leviatan N., Alkan N., Leshkowitz D. & Fluhr R. (2013). Genome-Wide Survey of Cold Stress Regulated Alternative Splicing in Arabidopsis thaliana with Tiling Microarray.  PLoS ONE. 2013 Jun 11 , 8 (6).
  17. Limor-Waisberg K., Ben-Dor S. & Fass D. (2013). Diversification of Quiescin sulfhydryl oxidase in a preserved framework for redox relay.  BMC Evolutionary Biology. 2013, 13 (1).
  18. Lotem J., Levanon D., Negreanu V., Leshkowitz D., Friedlander G. & Groner Y. (2013). Runx3-mediated transcriptional program in cytotoxic lymphocytes.  PLoS ONE. 2013 Nov 13 , 8 (11).
  19. Dicken J., Mildner A., Leshkowitz D., Touw I. P., Hantisteanu S., Groner Y. & Jung S. (2013). Transcriptional Reprogramming of CD11b+Esamhi Dendritic Cell Identity and Function by Loss of Runx3.  PLoS ONE. 2013 Oct 15 , 8 (10).
  20. Prilusky J. & Sussman J. L. (2013). Guest editorial: Databases and bioinformatics tools.  Israel Journal of Chemistry. 2013 Apr , 53 (3-4):143.