Bioinformatics: LSCF Publications

  1. Moing A., William Allwood J., Aharoni A., Baker J., Beale M. H., Ben-Dor S., Biais B., Brigante F., Burger Y., Deborde C., Erban A., Faigenboim A., Gur A., Goodacre R., Hansen T. H., Jacob D., Katzir N., Kopka J., Lewinsohn E., Maucourt M., Meir S., Miller S., Mumm R., Oren E., Paris H. S., Rogachev I., Rolin D., Saar U., Schjoerring J. K., Tadmor Y., Tzuri G., de Vos R. C., Ward J. L., Yeselson E., Hall R. D. & Schaffer A. A. (2020). Comparative metabolomics and molecular phylogenetics of melon (Cucumis melo, cucurbitaceae) biodiversity.  Metabolites. 2020 Mar , 10 (3).
  2. Anbalagan S., Blechman J., Gliksberg M., Gordon L., Rotkopf R., Dadosh T., Shimoni E. & Levkowitz G. (2020). Erratum: Correction: Robo2 regulates synaptic oxytocin content by affecting actin dynamics (eLife (2019) 8 PII: e63695).  eLife. 2020 Oct 5 , 9 .
  3. Olshina M. A., Arkind G., Deshmukh F. K., Fainer I., Taranavsky M., Hayat D., Ben-Dor S., Ben-Nissan G. & Sharon M. (2020). Regulation of the 20S Proteasome by a Novel Family of Inhibitory Proteins.  Antioxidants & Redox Signaling. 2020 Mar , 32 (9):636-655.
  4. Chen Q., Leshkowitz D., Blechman J. & Levkowitz G. (2020). Single-cell molecular and cellular architecture of the mouse neurohypophysis.  eNeuro. 2020, 7 (1).
  5. Cohen B., Tempelhof H., Raz T., Oren R., Nicenboim J., Bochner F., Even R., Jelinski A., Eilam R., Ben-Dor S., Adaddi Y., Golani O., Lazar S., Yaniv K. & Neeman M. (2020). BACH family members regulate angiogenesis and lymphangiogenesis by modulating VEGFC expression.  Life Science Alliance. 2020 Apr , 3 (4).
  6. Davidzohn N., Biram A., Stoler-Barak L., Grenov A., Dassa B. & Shulman Z. (2020). Syk degradation restrains plasma cell formation and promotes zonal transitions in germinal centers.  Journal of Experimental Medicine. 2020 Mar 2 , 217 (3).
  7. Eisenberg-Lerner A., Benyair R., Hizkiahou N., Nudel N., Maor R., Kramer M. P., Shmueli M. D., Zigdon I., Cherniavsky Lev M., Ulman A., Sagiv J. Y., Dayan M., Dassa B., Rosenwald M., Shachar I., Li J., Wang Y., Dezorella N., Khan S., Porat Z., Shimoni E., Avinoam O. & Merbl Y. (2020). Golgi organization is regulated by proteasomal degradation.  Nature Communications. 2020 Dec 1 , 11 (1).
  8. Agam A., Azuri I., Pinkas I., Gopher A. & Natalio F. (2020). Estimating temperatures of heated Lower Palaeolithic flint artefacts.  Nature Human Behaviour. 2020 Oct 5 , 4 (10):221-228.
  9. Zaidman D., Prilusky J. & London N. (2020). PRosettaC: Rosetta based modeling of PROTAC mediated ternary complexes: Rosetta based modeling of PROTAC mediated ternary complexes.  Journal of Chemical Information and Modeling. 2020 Oct 26 , 60 (10):4894-4903.
  10. Goldshtein H., Muhire A., Petel Légaré V., Pushett A., Rotkopf R., Shefner J. M., Peterson R. T., Armstrong G. A. & Russek- Blum N. (2020). Efficacy of Ciprofloxacin/Celecoxib combination in zebrafish models of amyotrophic lateral sclerosis.  Annals of Clinical and Translational Neurology. 2020 Oct 1 , 7 (10):1883-1897.
  11. Elhanani O., Salame T. M., Sobel J., Leshkowitz D., Povodovski L., Vaknin I., Kolodkin-Gal D. & Walker M. D. (2020). REST Inhibits Direct Reprogramming of Pancreatic Exocrine to Endocrine Cells by Preventing PDX1-Mediated Activation of Endocrine Genes.  Cell Reports. 2020 May 5 , 31 .
  12. Ouyang W., Azuri I., Mandelli D., Tkatchenko A., Kronik L., Urbakh M. & Hod O. (2020). Mechanical and Tribological Properties of Layered Materials under High Pressure: Assessing the Importance of Many-Body Dispersion Effects.  Journal of Chemical Theory and Computation. 2020 Jan 14 , 16 (1):666-676.
  13. Hadas R., Gershon E., Cohen A., Atrakchi O., Lazar S., Golani O., Dassa B., Elbaz M., Cohen G., Eilam R., Dekel N. & Neeman M. (2020). Hyaluronan control of the primary vascular barrier during early mouse pregnancy is mediated by uterine NK cells.  JCI insight. 2020 Nov 19 , 5 (22).
  14. Lorber D., Rotkopf R. & Volk T. (2020). A minimal constraint device for imaging nuclei in live Drosophila contractile larval muscles reveals novel nuclear mechanical dynamics: Drosophila contractile larval muscles reveals novel nuclear mechanical dynamics.  Lab on a Chip. 2020 Jun 21 , 20 (12):2100-2112.
  15. Vardi A., Ben-Dor S., Cho S. M., Kalinke U., Spanier J. & Futerman A. H. (2020). Mice defective in interferon signaling help distinguish between primary and secondary pathological pathways in a mouse model of neuronal forms of Gaucher disease.  Journal of Neuroinflammation. 2020 Sept 7 , 17 (1).
  16. Assaraf E., Blecher R., Heinemann-Yerushalmi L., Krief S., Carmel Vinestock R., Biton I. E., Brumfeld V., Rotkopf R., Avisar E., Agar G. & Zelzer E. (2020). Piezo2 expressed in proprioceptive neurons is essential for skeletal integrity.  Nature Communications. 2020 Dec 1 , 11 (1).
  17. Shemer A., Scheyltjens I., Frumer G. R., Kim J., Grozovski J., Ayanaw S., Dassa B., Van Hove H., Chappell-Maor L., Boura-Halfon S., Leshkowitz D., Mueller W., Maggio N., Movahedi K. & Jung S. (2020). Interleukin-10 Prevents Pathological Microglia Hyperactivation following Peripheral Endotoxin Challenge.  Immunity. 2020 Nov 17 , 53 (5):1033-1049.e7.
  18. Gross-Vered M., Trzebanski S., Shemer A., Bernshtein B., Curato C., Stelzer G., Salame T. M., David E., Boura-Halfon S., Chappell-Maor L., Leshkowitz D. & Jung S. (2020). Defining murine monocyte differentiation into colonic and ileal macrophages.  eLife. 2020 Jan , 9 .
  19. Biram A., Winter E., Denton A. E., Zaretsky I., Dassa B., Bemark M., Linterman M. A., Yaari G. & Shulman Z. (2020). B Cell Diversification Is Uncoupled from SAP-Mediated Selection Forces in Chronic Germinal Centers within Peyer's Patches.  Cell Reports. 2020 Feb 11 , 30 (6):1910-1922.e5.
  20. Gross-Vered M., Trzebanski S., Shemer A., Bernshtein B., Curato C., Stelzer G., Salame T. M., David E., Boura-Halfon S., Chappell-Maor L., Leshkowitz D. & Jung S. (2020). Defining murine monocyte differentiation into colonic and ileal macrophages.  eLife. 2020 Jan , 9 .