Bioinformatics: LSCF Publications

  1. Ku C., Sheyn U., Sebe-Pedros A., Ben-Dor S., Schatz D., Tanay A., Rosenwasser S. & Vardi A. (2020). A single-cell view on alga-virus interactions reveals sequential transcriptional programs and infection states.  Science Advances. 2020 May , 6 (21).
  2. Shreberk-Shaked M., Dassa B., Sinha S., Di Agostino S., Azuri I., Mukherjee S., Aylon Y., Blandino G., Ruppin E. & Oren M. (2020). A Division of Labor between YAP and TAZ in Non-Small Cell Lung Cancer.  Cancer Research. 2020 Oct 1 , 80 (19):4145-4157.
  3. Shreberk-Shaked M., Dassa B., Sinha S., Di Agostino S., Azuri I., Mukherjee S., Aylon Y., Blandino G., Ruppin E. & Oren M. (2020). A Division of Labor between YAP and TAZ in Non-Small Cell Lung Cancer.  Cancer Research. 2020 Oct 1 , 80 (19):4145-4157.
  4. Fenech E. J., Ben-Dor S. & Schuldiner M. (2020). Double the Fun, Double the Trouble: Paralogs and Homologs Functioning in the Endoplasmic Reticulum.  Annual Review of Biochemistry. 2020 Jun , 89 :637-666.
  5. Davidzohn N., Biram A., Stoler-Barak L., Grenov A., Dassa B. & Shulman Z. (2020). Syk degradation restrains plasma cell formation and promotes zonal transitions in germinal centers.  Journal of Experimental Medicine. 2020 Mar 2 , 217 (3).
  6. Cohen B., Tempelhof H., Raz T., Oren R., Nicenboim J., Bochner F., Even R., Jelinski A., Eilam R., Ben-Dor S., Adaddi Y., Golani O., Lazar S., Yaniv K. & Neeman M. (2020). BACH family members regulate angiogenesis and lymphangiogenesis by modulating VEGFC expression.  Life Science Alliance. 2020 Apr , 3 (4).
  7. Moing A., Allwood J. W., Aharoni A., Baker J., Beale M. H., Ben-Dor S., Biais B., Brigante F., Burger Y., Deborde C., Erban A., Faigenboim A., Gur A., Goodacre R., Hansen T. H., Jacob D., Katzir N., Kopka J., Lewinsohn E., Maucourt M., Meir S., Miller S., Mumm R., Oren E., Paris H. S., Rogachev I., Rolin D., Saar U., Schjoerring J. K., Tadmor Y., Tzuri G., de Vos R. C. H., Ward J. L., Yeselson E., Hall R. D. & Schaffer A. A. (2020). Comparative Metabolomics and Molecular Phylogenetics of Melon (Cucumis melo, Cucurbitaceae) Biodiversity.  Metabolites. 2020 Mar 24 , 10 (3).
  8. Ouyang W., Azuri I., Mandelli D., Tkatchenko A., Kronik L., Urbakh M. & Hod O. (2020). Mechanical and Tribological Properties of Layered Materials under High Pressure: Assessing the Importance of Many-Body Dispersion Effects.  Journal of Chemical Theory and Computation. 2020 Jan 14 , 16 (1):666-676.
  9. Elhanani O., Salame T. M., Sobel J., Leshkowitz D., Povodovski L., Vaknin I., Kolodkin-Gal D. & Walker M. D. (2020). REST Inhibits Direct Reprogramming of Pancreatic Exocrine to Endocrine Cells by Preventing PDX1-Mediated Activation of Endocrine Genes.  Cell Reports. 2020 May 5 , 31 .
  10. Azuri I., Ali M. E., Tarafder K., Oppeneer P. M. & Kronik L. (2020). Fe-porphyrin on Co(001) and Cu(001): A Comparative Dispersion-augmented Density Functional Theory Study.  Israel Journal of Chemistry. 2020 Feb 6 , 60 (8-9):870-875.
  11. Gonzalez-Beltran A. N., Masuzzo P., Ampe C., Bakker G., Besson S., Eibl R. H., Friedl P., Gunzer M., Kittisopikul M., Le Devedec S. E., Leo S., Moore J., Paran Y., Prilusky J., Rocca-Serra P., Roudot P., Schuster M., Sergeant G., Stromblad S., Swedlow J. R., van Erp M., Van Troys M., Zaritsky A., Sansone S. & Martens L. (2020). Community standards for open cell migration data.  GigaScience. 2020 May 12 , 9 (5).
  12. Gross-Vered M., Trzebanski S., Shemer A., Bernshtein B., Curato C., Stelzer G., Salame T., David E., Boura-Halfon S., Chappell-Maor L., Leshkowitz D. & Jung S. (2020). Defining murine monocyte differentiation into colonic and ileal macrophages.  eLife. 2020 Jan 8 , 9 .
  13. Hadas R., Gershon E., Cohen A., Atrakchi O., Lazar S., Golani O., Dassa B., Elbaz M., Cohen G., Eilam R., Dekel N. & Neeman M. (2020). Hyaluronan control of the primary vascular barrier during early mouse pregnancy is mediated by uterine NK cells.  JCI Insight. 2020 Nov 19 , 5 (22).
  14. Gross-Vered M., Trzebanski S., Shemer A., Bernshtein B., Curato C., Stelzer G., Salame T., David E., Boura-Halfon S., Chappell-Maor L., Leshkowitz D. & Jung S. (2020). Defining murine monocyte differentiation into colonic and ileal macrophages.  eLife. 2020 Jan 8 , 9 .
  15. Shemer A., Scheyltjens I., Frumer G. R., Kim J., Grozovski J., Ayanaw S., Dassa B., Van Hove H., Chappell-Maor L., Boura-Halfon S., Leshkowitz D., Mueller W., Maggio N., Movahedi K. & Jung S. (2020). Interleukin-10 Prevents Pathological Microglia Hyperactivation following Peripheral Endotoxin Challenge.  Immunity. 2020 Nov 17 , 53 (5):1033-1049.e7.
  16. Vardi A., Ben-Dor S., Cho S. M., Kalinke U., Spanier J. & Futerman A. H. (2020). Mice defective in interferon signaling help distinguish between primary and secondary pathological pathways in a mouse model of neuronal forms of Gaucher disease.  Journal of Neuroinflammation. 2020 Sept 7 , 17 .
  17. Lorber D., Rotkopf R. & Volk T. (2020). A minimal constraint device for imaging nuclei in live Drosophila contractile larval muscles reveals novel nuclear mechanical dynamics: Drosophila contractile larval muscles reveals novel nuclear mechanical dynamics.  Lab on a Chip. 2020 Jun 21 , 20 (12):2100-2112.
  18. Shemer A., Scheyltjens I., Frumer G. R., Kim J., Grozovski J., Ayanaw S., Dassa B., Van Hove H., Chappell-Maor L., Boura-Halfon S., Leshkowitz D., Mueller W., Maggio N., Movahedi K. & Jung S. (2020). Interleukin-10 Prevents Pathological Microglia Hyperactivation following Peripheral Endotoxin Challenge.  Immunity. 2020 Nov 17 , 53 (5):1033-1049.e7.
  19. Hantisteanu S., Dicken Y., Negreanu V., Goldenberg D., Brenner O., Leshkowitz D., Lotem J., Levanon D. & Groner Y. (2020). Runx3 prevents spontaneous colitis by directing the differentiation of anti-inflammatory mononuclear phagocytes.  PLoS ONE. 2020 May 26 , 15 (5).
  20. Basavalingappa V., Bera S., Xue B., Azuri I., Tang Y., Tao K., Shimon L. J. W., Sawaya M. R., Kolusheva S., Eisenberg D. S., Kronik L., Cao Y., Wei G. & Gazit E. (2019). Mechanically rigid supramolecular assemblies formed from an Fmoc-guanine conjugated peptide nucleic acid.  Nature Communications. 2019 Nov 20 , 10 (1).