Bioinformatics: LSCF Publications

  1. Srivastava S., Nataraj N. B., Sekar A., Ghosh S., Bornstein C., Drago-Garcia D., Roth L., Romaniello D., Marrocco I., David E., Gilad Y., Lauriola M., Rotkopf R., Kimchi A., Haga Y., Tsutsumi Y., Mirabeau O., Surdez D., Zinovyev A., Delattre O., Kovar H., Amit I. & Yarden Y. (2019). ETS Proteins Bind with Glucocorticoid Receptors: Relevance for Treatment of Ewing Sarcoma.  Cell Reports. 2019 Oct 1 , 29 (1):104-117.
  2. Lebow M. A., Schroeder M., Tsoory M., Holzman-Karniel D., Mehta D., Ben-Dor S., Gil S., Bradley B., Smith A. K., Jovanovic T., Ressler K. J., Binder E. B. & Chen A. (2019). Glucocorticoid-induced leucine zipper "quantifies" stressors and increases male susceptibility to PTSD.  Translational Psychiatry. 2019 Jul 25 , 9 (1).
  3. Gal H., Lysenko M., Stroganov S., Vadai E., Youssef S. A., Tzadikevitch-Geffen K., Rotkopf R., Biron-Shental T., de Bruin A., Neeman M. & Krizhanovsky V. (2019). Molecular pathways of senescence regulate placental structure and function.  EMBO Journal. 2019 Sept 16 , 38 (18).
  4. Weill U., Cohen N., Fadel A., Ben-Dor S. & Schuldiner M. (2019). Protein Topology Prediction Algorithms Systematically Investigated in the Yeast Saccharomyces cerevisiae.  BioEssays. 2019 Jul 11 , 41 (8).
  5. Zelnik I. D., Rozman B., Rosenfeld-Gur E., Ben-Dor S. & Futerman A. H. (2019). A Stroll Down the CerS Lane.  . 2019, :49-63.
  6. Sever L., Radomir L., Strim K., Weiner A., Shchottlender N., Lewinsky H., Barak A. F., Friedlander G., Ben-Dor S., Becker-Herman S. & Shachar I. (2019). SLAMF9 regulates pDC homeostasis and function in health and disease.  Proceedings of the National Academy of Sciences of the United States of America. 2019 Aug 13 , 116 (33):16489-16496.
  7. Bahat A., Lahav O., Plotnikov A., Leshkowitz D. & Dikstein R. (2019). Targeting Spt5-Pol II by Small-Molecule Inhibitors Uncouples Distinct Activities and Reveals Additional Regulatory Roles.  Molecular Cell. 2019 Nov 21 , 76 (4):617-631.
  8. Basavalingappa V., Bera S., Xue B., Azuri I., Tang Y., Tao K., Shimon L. J. W., Sawaya M. R., Kolusheva S., Eisenberg D. S., Kronik L., Cao Y., Wei G. & Gazit E. (2019). Mechanically rigid supramolecular assemblies formed from an Fmoc-guanine conjugated peptide nucleic acid.  Nature Communications. 2019 Nov 20 , 10 (1).
  9. Anbalagan S., Blechman J., Gliksberg M., Gordon L., Rotkopf R., Dadosh T., Shimoni E. & Levkowitz G. (2019). Robo2 regulates synaptic oxytocin content by affecting actin dynamics.  eLife. 2019 Jun 10 , 8 .
  10. Paudel I., Gerbi H., Zisovich A., Sapir G., Ben-Dor S., Brumfeld V. & Klein T. (2019). Drought tolerance mechanisms and aquaporin expression of wild vs. cultivated pear tree species in the field.  Environmental and Experimental Botany. 2019 Nov , 167 .
  11. Kohen R., Barlev J., Hornung G., Stelzer G., Feldmesser E., Kogan K., Safran M. & Leshkowitz D. (2019). UTAP: User-friendly Transcriptome Analysis Pipeline.  BMC Bioinformatics. 2019 Mar 25 , 20 (1).
  12. Curato C., Bernshtein B., Zupancic E., Dufner A., Jaitin D., Giladi A., David E., Chappell-Maor L., Leshkowitz D., Knobeloch K., Amit I., Florindo H. F. & Jung S. (2019). DC Respond to Cognate T Cell Interaction in the Antigen-Challenged Lymph Node.  Frontiers in Immunology. 2019 Apr 25 , 10 (APR).
  13. Phitsuwan P., Morais S., Dassa B., Henrissat B. & Bayer E. A. (2019). The Cellulosome Paradigm in An Extreme Alkaline Environment.  Microorganisms. 2019 Sept 12 , 7 (9).
  14. Sehrawat U., Koning F., Ashkenazi S., Stelzer G., Leshkowitz D. & Dikstein R. (2019). Cancer-Associated Eukaryotic Translation Initiation Factor 1A Mutants Impair Rps3 and Rps10 Binding and Enhance Scanning of Cell Cycle Genes.  Molecular and Cellular Biology. 2019 Jan 16 , 39 (3).
  15. Sehrawat U., Koning F., Ashkenazi S., Stelzer G., Leshkowitz D. & Dikstein R. (2019). Cancer-Associated Eukaryotic Translation Initiation Factor 1A Mutants Impair Rps3 and Rps10 Binding and Enhance Scanning of Cell Cycle Genes.  Molecular and Cellular Biology. 2019 Jan 16 , 39 (3).
  16. Eyal S., Kult S., Rubin S., Krief S., Felsenthal N., Pineault K. M., Leshkowitz D., Salame T., Addadi Y., Wellik D. M. & Zelzer E. (2019). Bone morphology is regulated modularly by global and regional genetic programs.  Development. 2019 Jul 26 , 146 (14).
  17. Zhivin-Nissan O., Dassa B., Morag E., Kupervaser M., Levin Y. & Bayer E. A. (2019). Unraveling essential cellulosomal components of the (Pseudo)Bacteroides cellulosolvens reveals an extensive reservoir of novel catalytic enzymes.  Biotechnology for Biofuels. 2019 May 9 , 12 (1).
  18. Lapidoth G., Parker J., Prilusky J. & Fleishman S. J. (2019). AbPredict 2: a server for accurate and unstrained structure prediction of antibody variable domains.  Bioinformatics. 2019 May 1 , 35 (9):1591-1593.
  19. Cohen G., Hadas R., Stefania R., Pagoto A., Ben-Dor S., Kohen F., Longo D., Elbaz M., Dekel N., Gershon E., Aime S. & Neeman M. (2019). Magnetic Resonance Imaging Reveals Distinct Roles for Tissue Transglutaminase and Factor XIII in Maternal Angiogenesis during Early Mouse Pregnancy.  Arteriosclerosis, Thrombosis, and Vascular Biology. 2019 Aug , 39 (8):1602-1613.
  20. Rosenwasser S., Sheyn U., Frada M. J., Pilzer D., Rotkopf R. & Vardi A. (2019). Unmasking cellular response of a bloom-forming alga to viral infection by resolving expression profiles at a single-cell level.  PLoS Pathogens. 2019 Apr 24 , 15 (4).