MICC Cell Observatory Publications

  1. Lopez R., Li B., Keren-Shaul H., Boyeau P., Kedmi M., Pilzer D., Jelinski A., Yofe I., David E., Wagner A., Ergen C., Addadi Y., Golani O., Ronchese F., Jordan M. I., Amit I. & Yosef N. (2022). DestVI identifies continuums of cell types in spatial transcriptomics data.  Nature biotechnology. 2022 Sept , 40 (9):1360-1369.
  2. Ibrahim J., Brumfeld V., Addadi Y., Rubin S., Weiner S. & Boaretto E. (2022). The petrous bone contains high concentrations of osteocytes: One possible reason why ancient DNA is better preserved in this bone.  PLoS ONE. 2022 Oct 25 , 17 (10).
  3. Mazor R. D., Nathan N., Gilboa A., Stoler-Barak L., Moss L., Solomonov I., Hanuna A., Divinsky Y., Shmueli M. D., Hezroni H., Zaretsky I., Mor M., Golani O., Sabah G., Jakobson-Setton A., Yanichkin N., Feinmesser M., Tsoref D., Salman L., Yeoshoua E., Peretz E., Erlich I., Mendelson Cohen N., Gershoni J. M., Freund N., Merbl Y., Yaari G., Eitan R., Sagi I. & Shulman Z. (2022). Tumor-reactive antibodies evolve from non-binding and autoreactive precursors.  Cell. 2022 Mar 31 , 185 (7):1208-1222.
  4. Regev O., Kizner M., Roncato F., Dadiani M., Saini M., Castro-Giner F., Yajuk O., Kozlovski S., Levi N., Addadi Y., Golani O., Ben-Dor S., Granot Z., Aceto N. & Alon R. (2022). ICAM-1 on Breast Cancer Cells Suppresses Lung Metastasis but Is Dispensable for Tumor Growth and Killing by Cytotoxic T Cells.  Frontiers in Immunology. 2022 Jul 11 , 13 .
  5. Regev O., Kizner M., Roncato F., Dadiani M., Saini M., Castro-Giner F., Yajuk O., Kozlovski S., Levi N., Addadi Y., Golani O., Ben-Dor S., Granot Z., Aceto N. & Alon R. (2022). ICAM-1 on Breast Cancer Cells Suppresses Lung Metastasis but Is Dispensable for Tumor Growth and Killing by Cytotoxic T Cells.  Frontiers in Immunology. 2022 Jul 11 , 13 .
  6. Hassin O., Nataraj N. B., Shreberk-Shaked M., Aylon Y., Yaeger R., Fontemaggi G., Mukherjee S., Maddalena M., Avioz A., Iancu O., Mallel G., Gershoni A., Grosheva I., Feldmesser E., Ben-Dor S., Golani O., Hendel A., Blandino G., Kelsen D., Yarden Y. & Oren M. (2022). Different hotspot p53 mutants exert distinct phenotypes and predict outcome of colorectal cancer patients.  Nature Communications. 2022 May 19 , 13 (1).
  7. Lopez R., Li B., Keren-Shaul H., Boyeau P., Kedmi M., Pilzer D., Jelinski A., Yofe I., David E., Wagner A., Ergen C., Addadi Y., Golani O., Ronchese F., Jordan M. I., Amit I. & Yosef N. (2022). DestVI identifies continuums of cell types in spatial transcriptomics data.  Nature biotechnology. 2022 Sept , 40 (9):1360-1369.
  8. Gur C., Wang S., Sheban F., Zada M., Li B., Kharouf F., Peleg H., Aamar S., Yalin A., Kirschenbaum D., Braun-Moscovici Y., Jaitin D. A., Meir-Salame T., Hagai E., Kragesteen B. K., Avni B., Grisariu S., Bornstein C., Shlomi-Loubaton S., David E., Shreberk-Hassidim R., Molho-Pessach V., Amar D., Tzur T., Kuint R., Gross M., Barboy O., Moshe A., Fellus-Alyagor L., Hirsch D., Addadi Y., Erenfeld S., Biton M., Tzemach T., Elazary A., Naparstek Y., Tzemach R., Weiner A., Giladi A., Balbir-Gurman A. & Amit I. (2022). LGR5 expressing skin fibroblasts define a major cellular hub perturbed in scleroderma.  Cell. 2022 Apr 14 , 185 (8):1373-1388.e20.
  9. Maddalena M., Mallel G., Nataraj N. B., Shreberk-Shaked M., Hassin O., Mukherjee S., Arandkar S., Rotkopf R., Kapsack A., Lambiase G., Pellegrino B., Ben-Isaac E., Golani O., Addadi Y., Hajaj E., Eilam R., Straussman R., Yarden Y., Lotem M. & Oren M. (2021). TP53 missense mutations in PDAC are associated with enhanced fibrosis and an immunosuppressive microenvironment.  Proceedings of the National Academy of Sciences. 2021 Jun 4 , 118 (23).
  10. Maddalena M., Mallel G., Nataraj N. B., Shreberk-Shaked M., Hassin O., Mukherjee S., Arandkar S., Rotkopf R., Kapsack A., Lambiase G., Pellegrino B., Ben-Isaac E., Golani O., Addadi Y., Hajaj E., Eilam R., Straussman R., Yarden Y., Lotem M. & Oren M. (2021). TP53 missense mutations in PDAC are associated with enhanced fibrosis and an immunosuppressive microenvironment.  Proceedings of the National Academy of Sciences. 2021 Jun 4 , 118 (23).
  11. Roncato F., Regev O., Feigelson S. W., Yadav S. K., Kaczmarczyk L., Levi N., Drago-Garcia D., Ovadia S., Kizner M., Addadi Y., Sabino J. C., Ovadya Y., de Almeida S. F., Feldmesser E., Gerlitz G. & Alon R. (2021). Reduced Lamin A/C Does Not Facilitate Cancer Cell Transendothelial Migration but Compromises Lung Metastasis.  Cancers. 2021 May 2 , 13 (10).
  12. Barnea Zohar M., Winograd-Katz S., Shalev M., Arman E., Reuven N., Roth L., Golani O., Stein M., Thalji F., Kanaan M., Tuckermann J., Geiger B. & Elson A. (2021). An SNX10-dependent mechanism downregulates fusion between mature osteoclasts.  Journal of Cell Science. 2021 May , 134 (9).
  13. Singh V., Houben L., Shimon L. J. W., Cohen S. R., Golani O., Feldman Y., Lahav M. & van der Boom M. E. (2021). Unusual Surface Texture, Dimensions and Morphology Variations of Chiral and Single Crystals.  Angewandte Chemie (International ed.). 2021 Aug 9 , 60 (33):18256-18264.
  14. Pewzner-Jung Y., Joseph T., Blumenreich S., Vardi A., Ferreira N. S., Cho S. M., Eilam R., Tsoory M., Biton I. E., Brumfeld V., Haffner-Krausz R., Brenner O., Sharabi N., Addadi Y., Salame T. M., Rotkopf R., Wigoda N., Yayon N., Merrill A. H., Schiffmann R. & Futerman A. H. (2021). Brain pathology and cerebellar purkinje cell loss in a mouse model of chronic neuronopathic Gaucher disease.  Progress in Neurobiology. 2021 Feb , 197 .
  15. Kalaora S., Nagler A., Nejman D., Alon M., Barbolin C., Barnea E., Ketelaars S. L. C., Cheng K., Vervier K., Shental N., Bussi Y., Rotkopf R., Levy R., Benedek G., Trabish S., Dadosh T., Levin-Zaidman S., Geller L. T., Wang K., Greenberg P., Yagel G., Peri A., Fuks G., Bhardwaj N., Reuben A., Hermida L., Johnson S. B., Galloway-Peña J. R., Shropshire W. C., Bernatchez C., Haymaker C., Arora R., Roitman L., Eilam R., Weinberger A., Lotan-Pompan M., Lotem M., Levin Y., Lawley T. D., Adams D. J., Levesque M. P., Besser M. J., Schachter J., Golani O., Segal E., Ruppin E., Kvistborg P., Peterson S. N., Wargo J. A., Straussman R. & Samuels Y. (2021). Identification of bacteria-derived HLA-bound peptides in melanoma.  Nature (London). 2021 Apr 1 , 592 (7852):138-143.
  16. Martins G. G., Cordelières F. P., Miura K., Colombelli J., D'Antuono R., Golani O., Guiet R., Haase R., Klemm A. H., Louveaux M., Paul-Gilloteaux P. & Tinevez J. Y. (2021). Highlights from the 2016-2020 NEUBIAS training schools for Bioimage Analysts: A success story and key asset for analysts and life scientists.  F1000Research. 2021 Apr 30 , 10 .
  17. Rubin S., Agrawal A., Stegmaier J., Krief S., Felsenthal N., Svorai J., Addadi Y., Villoutreix P., Stern T. & Zelzer E. (2021). Application of 3D MAPs pipeline identifies the morphological sequence chondrocytes undergo and the regulatory role of GDF5 in this process.  Nature Communications. 2021 Sept 1 , 12 (1):1-16.
  18. Aguilera-Castrejon A., Shani T., Ghanem N., Itzkovich C., Slomovich S., Tarazi S., Bayerl J., Chugaeva V., Ayyash M., Ashouokhi S., Sheban D., Livnat N., Lasman L., Viukov S., Zerbib M., Addadi Y., Rais Y., Cheng S., Keren-Shaul H., Stelzer Y., Shlomo R., Massarwa R., Novershtern N. & Hanna J. H. (2021). Ex utero mouse embryogenesis from pre-gastrulation to late organogenesis.  Nature (London). 2021 May 6 , 593 (7857):119-124.
  19. Cohen D., Mashiach R., Houben L., Galisova A., Addadi Y., Kain D., Lubart A., Blinder P., Allouche-Arnon H. & Bar-Shir A. (2021). Glyconanofluorides as Immunotracers with a Tunable Core Composition for Sensitive Hotspot Magnetic Resonance Imaging of Inflammatory Activity.  ACS Nano. 2021 Apr 27 , 15 (4):7563-7574.
  20. Bochner F., Mohan V., Zinger A., Golani O., Schroeder A., Sagi I. & Neeman M. (2020). Intravital imaging of vascular anomalies and extracellular matrix remodeling in orthotopic pancreatic tumors.  International Journal of Cancer. 2020 Apr 15 , 146 (8):2209-2217.