Bacteriology & Genomic repository Publications

  1. Ben Nissan R., Milshtein E., Pahl V., de Pins B., Jona G., Levi D., Yung H., Nir N., Ezra D., Gleizer S., Link H., Noor E. & Milo R. (2024). Autotrophic growth of Escherichia coli is achieved by a small number of genetic changes.  eLife. 2024 Feb , 13 .
  2. Sekeresova Kralova J., Donic C., Dassa B., Livyatan I., Jansen P. M., Ben-Dor S., Fidel L., Trzebanski S., Narunsky-Haziza L., Asraf O., Brenner O., Dafni H., Jona G., Boura-Halfon S., Stettner N., Segal E., Brunke S., Pilpel Y., Straussman R., Zeevi D., Bacher P., Hube B., Shlezinger N. & Jung S. (2024). Competitive fungal commensalism mitigates candidiasis pathology.  Journal of Experimental Medicine. 2024 May 6 , 221 (5).
  3. Rezenman S., Knafo M., Tsigalnitski I., Barad S., Jona G., Levi D., Dym O., Reich Z. & Kapon R. (2023). gUMI-BEAR, a modular, unsupervised population barcoding method to track variants and evolution at high resolution.  PLoS ONE. 2023 Jun 7 , 18 (6):e0286696.
  4. Jona G., Furman-Haran E. & Schmidt R. (2020). Realistic head-shaped phantom with brain-mimicking metabolites for 7 T spectroscopy and spectroscopic imaging.  NMR in Biomedicine. 2020 Oct 4 , (1).
  5. Kaminski Strauss S., Schirman D., Jona G., Brooks A. N., Kunjapur A. M., Ba A. N. N., Flint A., Solt A., Mershin A., Dixit A., Yona A. H., Csorgo B., Busby B. P., Hennig B. P., Pal C., Schraivogel D., Schultz D., Wernick D. G., Agashe D., Levi D., Zabezhinsky D., Russ D., Sass E., Tamar E., Herz E., Levy E. D., Church G. M., Yelin I., Nachman I., Gerst J. E., Georgeson J. M., Adamala K. P., Steinmetz L. M., Ruebsam M., Ralser M., Klutstein M., Desai M. M., Walunjkar N., Yin N., Hefetz N. A., Jakimo N., Snitser O., Adini O., Kumar P., Smith R. S. H., Zeidan R., Hazan R., Rak R., Kishony R., Johnson S., Nouriel S., Vonesch S. C., Foster S., Dagan T., Wein T., Karydis T., Wannier T. M., Stiles T., Olin-Sandoval V., Mueller W. F., Bar-On Y. M., Dahan O. & Pilpel Y. (2019). Evolthon: A community endeavor to evolve lab evolution.  PLoS Biology. 2019 Mar , 17 (3).
  6. Gleizer S., Ben-Nissan R., Bar-On Y. M., Antonovsky N., Noor E., Zohar Y., Jona G., Krieger E., Shamshoum M., Bar-Even A. & Milo R. (2019). Conversion of Escherichia coli to Generate All Biomass Carbon from CO2.  Cell. 2019 Nov 27 , 179 (6):1255-1263.
  7. Korem Kohanim Y., Levi D., Jona G., Towbin B. D., Bren A. & Alon U. (2018). A Bacterial Growth Law out of Steady State.  Cell Reports. 2018 Jun 5 , 23 (10):2891-2900.
  8. Goldshmit Y., Jona G., Schmukler E., Solomon S., Pinkas-Kramarski R. & Ruban A. (2018). Blood Glutamate Scavenger as a Novel Neuroprotective Treatment in Spinal Cord Injury.  Journal of Neurotrauma. 2018 May 15 , 35 (21):2581-2590.
  9. Herbst R. H., Bar-Zvi D., Reikhav S., Soifer I., Breker M., Jona G., Shimoni E., Schuldiner M., Levy A. A. & Barkai N. (2017). Heterosis as a consequence of regulatory incompatibility.  BMC Biology. 2017 May 11 , 15 .
  10. Kafri M., Metzl-Raz E., Jona G. & Barkai N. (2016). The Cost of Protein Production.  Cell Reports. 2016 Jan 5 , 14 (1):22-31.
  11. Leshkowitz D., Feldmesser E., Friedlander G., Jona G., Ainbinder E., Parmet Y. & Horn-Saban S. (2016). Using synthetic mouse spike-in transcripts to evaluate RNA-seq analysis tools.  PLoS ONE. 2016 Apr , 11 (4).
  12. Dzien P., Fages A., Jona G., Brindle K. M., Schwaiger M. & Frydman L. (2016). Following Metabolism in Living Microorganisms by Hyperpolarized H-1 NMR.  Journal of the American Chemical Society. 2016 Sept 21 , 138 (37):12278-12286.
  13. Antonovsky N., Gleizer S., Noor E., Zohar Y., Herz E., Barenholz U., Zelcbuch L., Amram S., Wides A., Tepper N., Davidi D., Bar-On Y., Bareia T., Wernick D. G., Shani I., Malitsky S., Jona G., Bar-Even A. & Milo R. (2016). Sugar Synthesis from CO2 in Escherichia coli.  Cell. 2016 Jun 30 , 166 (1):115-125.
  14. Korem T., Zeevi D., Suez J., Weinberger A., Avnit Sagi S. T., Pompan-Lotan M., Matot E., Jona G., Harmelin A., Cohen N., Sirota-Madi A., Thaiss C. A., Pevsner-Fischer M., Sorek R., Xavier R. J., Elinav E. & Segal E. (2015). Growth dynamics of gut microbiota in health and disease inferred from single metagenomic samples.  Science (New York, N.Y.). 2015 Sept 4 , 349 (6252):1101-1106.
  15. Keren L., Van Dijk D. D., Weingarten-Gabbay S., Davidi D., Jona G., Weinberger A., Milo R. & Segal E. (2015). Noise in gene expression is coupled to growth rate.  Genome Research. 2015 Sept 9 , 25 :1893-1902.
  16. Ruban A., Malina K., Cooper I., Graubardt N., Babakin L., Jona G. & Teichberg V. (2015). Combined Treatment of an Amyotrophic Lateral Sclerosis Rat Model with Recombinant GOT1 and Oxaloacetic Acid: A Novel Neuroprotective Treatment.  Neurodegenerative Diseases. 2015 Aug 20 , 15 (4):233-242.
  17. Ruban A., Mohar B., Jona G. & Teichberg V. I. (2014). Blood glutamate scavenging as a novel neuroprotective treatment for paraoxon intoxication.  Journal of Cerebral Blood Flow and Metabolism. 2014 Feb , 34 (2):221-227.
  18. Beck A., Vinik Y., Shatz-Azoulay H., Isaac R., Streim S., Jona G., Boura-Halfon S. & Zick Y. (2013). Otubain 2 is a novel promoter of beta cell survival as revealed by siRNA high-throughput screens of human pancreatic islets.  Diabetologia. 2013 Jun , 56 (6):1317-1326.
  19. Meliopoulos V. A., Andersen L. E., Birrer K. F., Simpson K. J., Lowenthal J. W., Bean A. G. D., Stambas J., Stewart C. R., Tompkins S. M., van Beusechem B. V. W., Fraser I., Mhlanga M., Barichievy S., Smith Q., Leake D., Karpilow J., Buck A., Jona G. & Tripp R. A. (2012). Host gene targets for novel influenza therapies elucidated by high-throughput RNA interference screens.  FASEB Journal. 2012 Apr , 26 (4):1372-1386.
  20. Zhu H., Hu S., Jona G., Zhu X., Kreiswirth N., Willey B., Mazzulli T., Liu G., Song Q., Chen P., Cameron M., Tyler A., Wang J., Wen J., Chen W., Compton S. & Snyder M. (2006). Severe acute respiratory syndrome diagnostics using a coronavirus protein microarray.  Proceedings Of The National Academy Of Sciences Of The United States Of America-Biological Sciences. 2006 Mar 14 , 103 (11):4011-4016.