Mass Cytometry Publications

  1. Ben-Uri R., Ben Shabat L., Shainshein D., Bar-Tal O., Bussi Y., Maimon N., Keidar Haran T., Milo I., Goliand I., Addadi Y., Salame T. M., Rochwarger A., Schürch C. M., Bagon S., Elhanani O. & Keren L. (2025). High-dimensional imaging using combinatorial channel multiplexing and deep learning.  Nature Biotechnology. 2025 Mar 25 , .
  2. Shvefel S. C., Pai J. A., Cao Y., Pal L. R., Bartok O., Levy R., Zemanek M. J., Weller C., Herzog E., Yao W., Hiam-Galvez K. J., Cheng K., Yin Y., Du P. P., Raposo C. J., Gumpert N., Welti M., Martínez Gómez J. M., Sella F., Yakubovich E., Orr I., Ben-Dor S., Oren R., Fellus-Alyagor L., Golani O., Brenner O. J., Salame T. M., Zerbib M., Goliand I., Ranmar D., Savchenko I., Ketrarou N., Schäffer A. A., Dahan R., Levesque M. P., Ruppin E., Satpathy A. T. & Samuels Y. (2025). Temporal Genomic Analysis of Homogeneous Tumor Models Reveals Key Regulators of Immune Evasion in Melanoma.  Cancer Discovery. 2025 Mar 1 , 15 (3):553-577.
  3. Peralta Ramos J. M., Castellani G., Kviatcovsky D., Croese T., Tsitsou-Kampeli A., Burgaletto C., Abellanas M. A., Cahalon L., Phoebeluc Colaiuta S., Salame T. M., Kuperman Y., Savidor A., Itkin M., Malitsky S., Ovadia S., Ferrera S., Kalfon L., Kadmani S., Samra N., Paz R., Rokach L., Furlan R., Aharon-Peretz J., Falik-Zaccai T. C. & Schwartz M. (2025). Targeting CD38 immunometabolic checkpoint improves metabolic fitness and cognition in a mouse model of Alzheimers disease.  Nature Communications. 2025 Apr 20 , 16 .
  4. Valenti R., David Y., Edilbi D., Dubreuil B., Boshnakovska A., Asraf Y., Salame T. M., Sass E., Rehling P. & Schuldiner M. (2025). A proteome-wide yeast degron collection for the dynamic study of protein function.  The Journal of Cell Biology. 2025 Feb 3 , 224 (2).
  5. Furth N., Cohen N., Spitzer A., Salame T. M., Dassa B., Mehlman T., Brandis A., Moussaieff A., Friedmann-Morvinski D., Castro M. G., Fortin J., Suvà M. L., Tirosh I., Erez A., Ron G. & Shema E. (2025). Oncogenic IDH1mut drives robust loss of histone acetylation and increases chromatin heterogeneity.  Proceedings of the National Academy of Sciences - PNAS. 2025 Jan 7 , 122 (1).
  6. Azulay N., Milo I., Bussi Y., Uri R. B., Haran T. K., Eldar M., Elhanani O., Harnik Y., Yakubovsky O., Nachmany I., Salame T., Wartenberg M., Bertheau P., Michonneau D., Socie G. & Keren L. (2024). A spatial atlas of human gastro-intestinal acute GVHD reveals epithelial and immune dynamics underlying disease pathophysiology.  BioRxiv. 2024 Sept 3 , .
  7. Majewska J., Agrawal A., Mayo A., Roitman L., Chatterjee R., Sekeresova Kralova J., Landsberger T., Katzenelenbogen Y., Meir-Salame T., Hagai E., Sopher I., Perez-Correa J. F., Wagner W., Maimon A., Amit I., Alon U. & Krizhanovsky V. (2024). p16-dependent increase of PD-L1 stability regulates immunosurveillance of senescent cells.  Nature Cell Biology. 2024 Aug , 26 (8):1336-1345.
  8. Amitay Y., Milo I., Keidar Haran T., Deis S., Truzman G., Elhanani O., Salame T., Azimov M., Stein I., Cohen J. E., Lotem M., Pikarsky E. & Keren L. (2024). Immune organization in sentinel lymph nodes of melanoma patients is prognostic of distant metastases.  BioRxiv. 2024 Nov 26 , .
  9. Simoni-Nieves A., Lindzen M., Giri S., Gupta N., Chatterjee R., Selvadurai B. R., Van Daele M., Love D., Haga Y., Romaniello D., Salame T. M., Zerbib M., Oren R., Tsutsumi Y., Lauriola M., Marrocco I. & Yarden Y. (2024). A bispecific antibody targeting EGFR and AXL delays resistance to osimertinib.  Cell Reports Medicine. 2024 Sept 17 , 5 (9).
  10. Cinnamon E., Stein I., Zino E., Rabinovich S., Shovman Y., Schlesinger Y., Salame T. M., Reich-Zeliger S., Albrecht T., Roessler S., Schirmacher P., Lotem M., Ben-Neriah Y., Parnas O. & Pikarsky E. (2024). RORc-expressing immune cells negatively regulate tertiary lymphoid structure formation and support their pro-tumorigenic functions.  Journal of Hepatology. 2024 Dec 20 , .
  11. Nachmany I., Nevo S., Edelheit S., Sarusi-Portuguez A., Friedlander G., Salame T. M., Pavlov V., Yakubovsky O. & Pencovich N. (2024). Myeloid derived suppressor cells mediate hepatocyte proliferation and immune suppression during liver regeneration following resection.  Genes and Immunity. 2024 Nov 2 , 25 (6):483-491.
  12. Rachmian N., Medina S., Cherqui U., Akiva H., Deitch D., Edilbi D., Croese T., Salame T. M., Ramos J. M. P., Cahalon L., Krizhanovsky V. & Schwartz M. (2024). Identification of senescent, TREM2-expressing microglia in aging and Alzheimers disease model mouse brain.  Nature Neuroscience. 2024 Jun , 27 (6):1116-1124.
  13. Aylon Y., Furth N., Mallel G., Friedlander G., Nataraj N. B., Dong M., Hassin O., Zoabi R., Cohen B., Drendel V., Salame T. M., Mukherjee S., Harpaz N., Johnson R., Aulitzky W. E., Yarden Y., Shema E. & Oren M. (2023). Author Correction: Breast cancer plasticity is restricted by a LATS1-NCOR1 repressive axis (doi 10.1038/s41467-022-34863-9 , 28 Nov, 2022).  Nature Communications. 2023 Jan 10 , 14 (1).
  14. Gershoni A., Hassin O., Nataraj N. B., Baruch S., Avioz-Seligman A., Pirona A. C., Fellus-Alyagor L., Meir Salame T., Mukherjee S., Mallel G., Yarden Y., Aylon Y. & Oren M. (2023). TAZ facilitates breast tumor growth by promoting an immune-suppressive tumor microenvironment.  Molecular Oncology. 2023 Dec , 17 (12):2675-2693.
  15. Suzzi S., Croese T., Ravid A., Gold O., Clark A. R., Medina S., Kitsberg D., Adam M., Vernon K. A., Kohnert E., Shapira I., Malitsky S., Itkin M., Brandis A., Mehlman T., Salame T. M., Colaiuta S. P., Cahalon L., Slyper M., Greka A., Habib N. & Schwartz M. (2023). N-acetylneuraminic acid links immune exhaustion and accelerated memory deficit in diet-induced obese Alzheimers disease mouse model.  Nature Communications. 2023 Dec , 14 (1).
  16. Hassin O., Sernik M., Seligman A., Vogel F. C., Wellenstein M. D., Smollich J., Halperin C., Pirona A. C., Toledano L. N., Caballero C. D., Schlicker L., Salame T. M., Portuguez A. S., Aylon Y., Scherz-Shouval R., Geiger T., de Visser K. E., Schulze A. & Oren M. (2023). p53 deficient breast cancer cells reprogram preadipocytes toward tumor-protective immunomodulatory cells.  Proceedings of the National Academy of Sciences of the United States of America. 2023 Dec 26 , 120 (52).
  17. Gavish A., Chain B., Salame T. M., Antebi Y. E., Katz S., Reich-Zeliger S. & Friedman N. (2023). From pseudo to real time dynamics of T cell thymic differentiation.  iScience. 2023 Jan 20 , 26 (1).
  18. Dekel-Bird N. P., Bialik S., Itzhaki O., Meir Salame T., Yaeli-Slonim N., Levin-Salomon V., Dasari S. K., Besser M. & Kimchi A. (2022). A Functional Pre-Screening Platform for Identifying Points of Vulnerability in the Cell Death Map of Human Melanoma Tumors.  Journal of Cancer Science and Clinical Therapeutics. 2022 Jan 27 , 6 (1):39-60.
  19. Kosenko A., Salame T. M., Friedlander G. & Barash I. (2022). Macrophage-Secreted CSF1 Transmits a Calorie Restriction-Induced Self-Renewal Signal to Mammary Epithelial Stem Cells.  Cells (Basel, Switzerland). 2022 Sept , 11 (18).
  20. Kosenko A., Salame T., Fridlander G. & Barash I. (2022). Newly characterized bovine mammary stromal region with epithelial properties supports representative epithelial outgrowth development from transplanted stem cells.  Cell and Tissue Research. 2022 Jan , 387 (1):39-61.