Bioinformatics: LSCF Publications

  1. Tsamir-Rimon M., Ben-Dor S., Feldmesser E., Oppenhimer-Shaanan Y., David-Schwartz R., Samach A. & Klein T. (2020). Rapid starch degradation in the wood of olive trees under heat and drought is permitted by three stress-specific beta amylases.  New Phytologist. 2020 Sept , .
  2. Azuri I., Ali M. E., Tarafder K., Oppeneer P. M. & Kronik L. (2020). Fe-porphyrin on Co(001) and Cu(001): A Comparative Dispersion-augmented Density Functional Theory Study.  Israel Journal of Chemistry. 2020 Feb , 60 (8-9):870-875.
  3. Gonzalez-Beltran A. N., Masuzzo P., Ampe C., Bakker G., Besson S., Eibl R. H., Friedl P., Gunzer M., Kittisopikul M., Le Devedec S. E., Leo S., Moore J., Paran Y., Prilusky J., Rocca-Serra P., Roudot P., Schuster M., Sergeant G., Stromblad S., Swedlow J. R., van Erp M., Van Troys M., Zaritsky A., Sansone S. & Martens L. (2020). Community standards for open cell migration data.  GigaScience. 2020 May , 9 (5).
  4. Zaidman D., Prilusky J. & London N. (2020). PRosettaC: Rosetta based modeling of PROTAC mediated ternary complexes.  Journal of Chemical Information and Modeling. 2020 Oct , 60 (10):4894-4903.
  5. Tsamir-Rimon M., Ben-Dor S., Feldmesser E., Oppenhimer-Shaanan Y., David-Schwartz R., Samach A. & Klein T. (2020). Rapid starch degradation in the wood of olive trees under heat and drought is permitted by three stress-specific beta amylases.  New Phytologist. 2020 Sept , .
  6. Ouyang W., Azuri I., Mandelli D., Tkatchenko A., Kronik L., Urbakh M. & Hod O. (2020). Mechanical and Tribological Properties of Layered Materials under High Pressure: Assessing the Importance of Many-Body Dispersion Effects.  Journal of Chemical Theory and Computation. 2020 Jan , 16 (1):666-676.
  7. Davidzohn N., Biram A., Stoler-Barak L., Grenov A., Dassa B. & Shulman Z. (2020). Syk degradation restrains plasma cell formation and promotes zonal transitions in germinal centers.  Journal of Experimental Medicine. 2020 Mar , 217 (3).
  8. Hantisteanu S., Dicken Y., Negreanu V., Goldenberg D., Brenner O., Leshkowitz D., Lotem J., Levanon D. & Groner Y. (2020). Runx3 prevents spontaneous colitis by directing the differentiation of anti-inflammatory mononuclear phagocytes.  PLoS ONE. 2020 May , 15 (5).
  9. Agam A., Azuri I., Pinkas I., Gopher A. & Natalio F. (2020). Estimating temperatures of heated Lower Palaeolithic flint artefacts.  Nature Human Behaviour. 2020 Oct , 4 (10).
  10. Hadas R., Gershon E., Cohen A., Atrakchi O., Lazar S., Golani O., Dassa B., Elbaz M., Cohen G., Eilam R., Dekel N. & Neeman M. (2020). Hyaluronan control of the primary vascular barrier during early mouse pregnancy is mediated by uterine NK cells.  JCI insight. 2020 Nov , 5 (22).
  11. Cohen B., Tempelhof H., Raz T., Oren R., Nicenboim J., Bochner F., Even R., Jelinski A., Eilam R., Ben-Dor S., Adaddi Y., Golani O., Lazar S., Yaniv K. & Neeman M. (2020). BACH family members regulate angiogenesis and lymphangiogenesis by modulating VEGFC expression.  Life Science Alliance. 2020 Apr , 3 (4).
  12. Assaraf E., Blecher R., Heinemann-Yerushalmi L., Krief S., Carmel Vinestock R., Biton I. E., Brumfeld V., Rotkopf R., Avisar E., Agar G. & Zelzer E. (2020). Piezo2 expressed in proprioceptive neurons is essential for skeletal integrity.  Nature Communications. 2020 Jun , 11 (1).
  13. Shemer A., Scheyltjens I., Frumer G. R., Kim J., Grozovski J., Ayanaw S., Dassa B., Van Hove H., Chappell-Maor L., Boura-Halfon S., Leshkowitz D., Mueller W., Maggio N., Movahedi K. & Jung S. (2020). Interleukin-10 Prevents Pathological Microglia Hyperactivation following Peripheral Endotoxin Challenge.  Immunity. 2020 Oct , .
  14. Pewzner-Jung Y., Joseph T., Blumenreich S., Vardi A., Ferreira N. S., Cho S. M., Eilam R., Tsoory M., Biton I. E., Brumfeld V., Haffner-Krausz R., Brenner O., Sharabi N., Addadi Y., Salame T. M., Rotkopf R., Wigoda N., Yayon N., Merrill A. H., Schiffmann R. & Futerman A. H. (2020). Brain pathology and cerebellar purkinje cell loss in a mouse model of chronic neuronopathic Gaucher disease.  Progress in Neurobiology. 2020 Nov , .
  15. Zhivin-Nissan O., Dassa B., Morag E., Kupervaser M., Levin Y. & Bayer E. A. (2019). Unraveling essential cellulosomal components of the (Pseudo)Bacteroides cellulosolvens reveals an extensive reservoir of novel catalytic enzymes.  Biotechnology for Biofuels. 2019 May , 12 .
  16. Paudel I., Gerbi H., Zisovich A., Sapir G., Ben-Dor S., Brumfeld V. & Klein T. (2019). Drought tolerance mechanisms and aquaporin expression of wild vs. cultivated pear tree species in the field.  Environmental and Experimental Botany. 2019 Nov , 167 .
  17. Kohen R., Barlev J., Hornung G., Stelzer G., Feldmesser E., Kogan K., Safran M. & Leshkowitz D. (2019). UTAP: User-friendly Transcriptome Analysis Pipeline.  BMC Bioinformatics. 2019 Mar , 20 .
  18. Sehrawat U., Koning F., Ashkenazi S., Stelzer G., Leshkowitz D. & Dikstein R. (2019). Cancer-Associated Eukaryotic Translation Initiation Factor 1A Mutants Impair Rps3 and Rps10 Binding and Enhance Scanning of Cell Cycle Genes.  Molecular and Cellular Biology. 2019 Jan , 39 (3).
  19. Lapidoth G., Parker J., Prilusky J. & Fleishman S. J. (2019). AbPredict 2: a server for accurate and unstrained structure prediction of antibody variable domains.  Bioinformatics. 2019 May , 35 (9):1591-1593.
  20. Phitsuwan P., Morais S., Dassa B., Henrissat B. & Bayer E. A. (2019). The Cellulosome Paradigm in An Extreme Alkaline Environment.  Microorganisms. 2019 Sept , 7 (9).