Bioinformatics: LSCF Publications

  1. Gal H., Lysenko M., Stroganov S., Vadai E., Youssef S. A., Tzadikevitch-Geffen K., Rotkopf R., Biron-Shental T., de Bruin A., Neeman M. & Krizhanovsky V. (2019). Molecular pathways of senescence regulate placental structure and function.  EMBO Journal. 2019 Sept , 38 (18).
  2. Machluf Y., Farkash R., Rotkopf R., Fink D. & Chaiter Y. (2019). Asthma phenotypes and associated comorbidities in a large cohort of adolescents in Israel.  Journal of Asthma. 2019 Apr , .
  3. Kohen R., Barlev J., Hornung G., Stelzer G., Feldmesser E., Kogan K., Safran M. & Leshkowitz D. (2019). UTAP: User-friendly Transcriptome Analysis Pipeline.  BMC Bioinformatics. 2019 Mar , 20 .
  4. Sehrawat U., Koning F., Ashkenazi S., Stelzer G., Leshkowitz D. & Dikstein R. (2019). Cancer-Associated Eukaryotic Translation Initiation Factor 1A Mutants Impair Rps3 and Rps10 Binding and Enhance Scanning of Cell Cycle Genes.  Molecular and Cellular Biology. 2019 Feb , 39 (3).
  5. Zhivin-Nissan O., Dassa B., Morag E., Kupervaser M., Levin Y. & Bayer E. A. (2019). Unraveling essential cellulosomal components of the (Pseudo)Bacteroides cellulosolvens reveals an extensive reservoir of novel catalytic enzymes.  Biotechnology for Biofuels. 2019 May , 12 .
  6. Paudel I., Gerbi H., Zisovich A., Sapir G., Ben-Dor S., Brumfeld V. & Klein T. (2019). Drought tolerance mechanisms and aquaporin expression of wild vs. cultivated pear tree species in the field.  Environmental and Experimental Botany. 2019 Nov , 167 .
  7. Kohen R., Barlev J., Hornung G., Stelzer G., Feldmesser E., Kogan K., Safran M. & Leshkowitz D. (2019). UTAP: User-friendly Transcriptome Analysis Pipeline.  BMC Bioinformatics. 2019 Mar , 20 .
  8. Lapidoth G., Parker J., Prilusky J. & Fleishman S. J. (2019). AbPredict 2: a server for accurate and unstrained structure prediction of antibody variable domains.  Bioinformatics. 2019 May , 35 (9):1591-1593.
  9. Phitsuwan P., Morais S., Dassa B., Henrissat B. & Bayer E. A. (2019). The Cellulosome Paradigm in An Extreme Alkaline Environment.  Microorganisms. 2019 Sept , 7 (9).
  10. Anbalagan S., Blechman J., Gliksberg M., Gordon L., Rotkopf R., Dadosh T., Shimoni E. & Levkowitz G. (2019). Robo2 regulates synaptic oxytocin content by affecting actin dynamics.  eLife. 2019 Jun , 8 .
  11. Srivastava S., Nataraj N. B., Sekar A., Ghosh S., Bornstein C., Drago-Garcia D., Roth L., Romaniello D., Marrocco I., David E., Gilad Y., Lauriola M., Rotkopf R., Kimchi A., Haga Y., Tsutsumi Y., Mirabeau O., Surdez D., Zinovyev A., Delattre O., Kovar H., Amit I. & Yarden Y. (2019). ETS Proteins Bind with Glucocorticoid Receptors: Relevance for Treatment of Ewing Sarcoma.  Cell Reports. 2019 Oct , 29 (1):104-117.
  12. Weill U., Cohen N., Fadel A., Ben-Dor S. & Schuldiner M. (2019). Protein Topology Prediction Algorithms Systematically Investigated in the Yeast Saccharomyces cerevisiae.  BioEssays. 2019 Jul , .
  13. Zelnik I. D., Rozman B., Rosenfeld-Gur E., Ben-Dor S. & Futerman A. H. (2019). A Stroll Down the CerS Lane.  . 2019, :49-63.
  14. Sehrawat U., Koning F., Ashkenazi S., Stelzer G., Leshkowitz D. & Dikstein R. (2019). Erratum: Cancer-Associated Eukaryotic Translation Initiation Factor 1A Mutants Impair Rps3 and Rps10 Binding and Enhance Scanning of Cell Cycle Genes (vol 39, e00441-18, 2019).  Molecular and Cellular Biology. 2019 Mar , 39 (6).
  15. Lebow M. A., Schroeder M., Tsoory M., Holzman-Karniel D., Mehta D., Ben-Dor S., Gil S., Bradley B., Smith A. K., Jovanovic T., Ressler K. J., Binder E. B. & Chen A. (2019). Glucocorticoid-induced leucine zipper "quantifies" stressors and increases male susceptibility to PTSD.  Translational Psychiatry. 2019 Jul , 9 .
  16. Bahat A., Lahav O., Plotnikov A., Leshkowitz D. & Dikstein R. (2019). Targeting Spt5-Pol II by Small-Molecule Inhibitors Uncouples Distinct Activities and Reveals Additional Regulatory Roles.  Molecular Cell. 2019 Nov , 76 (4):617-631.
  17. Adler-abramovich L., Arnon Z. A., Sui X., Azuri I., Cohen H., Hod O., Kronik L., Shimon L. J. W., Wagner H. D. & Gazit E. (2018). Bionanostructures: Bioinspired Flexible and Tough Layered Peptide Crystals (Adv. Mater. 5/2018, Back Cover).  . 2018 Feb , 30 .
  18. Feigelson S. W., Solomon A., Biram A., Hatzav M., Lichtenstein M., Regev O., Kozlovski S., Varol D., Curato C., Leshkowitz D., Jung S., Shulman Z. & Alon R. (2018). ICAMs Are Not Obligatory for Functional Immune Synapses between Naive CD4 T Cells and Lymph Node DCs.  Cell Reports. 2018 Jan , 22 (4):849-859.
  19. Weill U., Yofe I., Sass E., Stynen B., Davidi D., Natarajan J., Ben-Menachem R., Avihou Z., Goldman O., Harpaz N., Chuartzman S., Kniazev K., Knoblach B., Laborenz J., Boos F., Kowarzyk J., Ben-Dor S., Zalckvar E., Herrmann J. M., Rachubinski R. A., Pines O., Rapaport D., Michnick S. W., Levy E. D. & Schuldiner M. (2018). Genome-wide SWAp-Tag yeast libraries for proteome exploration.  Nature Methods. 2018 Aug , 15 (8):617-622.
  20. Adler-Abramovich L., Arnon Z. A., Sui X., Azuri I., Cohen H., Hod O., Kronik L., Shimon L. J. W., Wagner H. D. & Gazit E. (2018). Bioinspired Flexible and Tough Layered Peptide Crystals.  Advanced Materials. 2018 Feb , 30 (5).