Bioinformatics: LSCF Publications

  1. Yado S., Dassa B., Zoabi R., Reich-Zeliger S., Friedman N. & Geiger B. (2024). Molecular mechanisms underlying the modulation of T-cell proliferation and cytotoxicity by immobilized CCL21 and ICAM1.  Journal for ImmunoTherapy of Cancer. 2024 Jun 12 , 12 (6).
  2. Fox H., Ben-Dor S., Doron-Faigenboim A., Goldsmith M., Klein T. & David-Schwartz R. (2023). Carbohydrate dynamics in Populus trees under drought: An expression atlas of genes related to sensing, translocation, and metabolism across organs.  Physiologia Plantarum. 2023 Sept , 175 (5).
  3. Oftedal B. E., Berger A. H., Bruserud Ø., Goldfarb Y., Sulen A., Breivik L., Hellesen A., Ben-Dor S., Haffner-Krausz R., Knappskog P. M., Johansson S., Wolff A. S., Bratland E., Abramson J. & Husebye E. S. (2023). A partial form of AIRE deficiency underlies a mild form of autoimmune polyendocrine syndrome type 1.  The Journal of Clinical Investigation. 2023 Nov 1 , 133 (21).
  4. de Haan D., Aram L., Peled-Zehavi H., Addadi Y., Ben-Joseph O., Rotkopf R., Elad N., Rechav K. & Gal A. (2023). Exocytosis of the silicified cell wall of diatoms involves extensive membrane disintegration.  Nature Communications. 2023 Dec , 14 (1).
  5. Levi N., Papismadov N., Majewska J., Roitman L., Wigoda N., Eilam R., Tsoory M., Rotkopf R., Ovadya Y., Akiva H., Regev O. & Krizhanovsky V. (2023). p21 facilitates chronic lung inflammation via epithelial and endothelial cells.  Aging (Albany, NY.). 2023, 15 (7):2395-2417.
  6. Swaminathan A., Gliksberg M., Anbalagan S., Wigoda N. & Levkowitz G. (2023). Stress resilience is established during development and is regulated by complement factors.  Cell Reports. 2023 Jan 31 , 42 (1).
  7. Givony T., Leshkowitz D., Del Castillo D., Nevo S., Kadouri N., Dassa B., Gruper Y., Khalaila R., Ben-Nun O., Gome T., Dobeš J., Ben-Dor S., Kedmi M., Keren-Shaul H., Heffner-Krausz R., Porat Z., Golani O., Addadi Y., Brenner O., Lo D. D., Goldfarb Y. & Abramson J. (2023). Thymic mimetic cells function beyond self-tolerance.  Nature. 2023 Oct 5 , 622 (7981):164172.
  8. Gruper Y., Wolff A. S. B., Glanz L., Spoutil F., Marthinussen M. C., Osickova A., Herzig Y., Goldfarb Y., Aranaz-Novaliches G., Dobeš J., Kadouri N., Ben-Nun O., Binyamin A., Lavi B., Givony T., Khalaila R., Gome T., Wald T., Mrazkova B., Sochen C., Besnard M., Ben-Dor S., Feldmesser E., Orlova E. M., Hegedűs C., Lampé I., Papp T., Felszeghy S., Sedlacek R., Davidovich E., Tal N., Shouval D. S., Shamir R., Guillonneau C., Szondy Z., Lundin K. E. A., Osicka R., Prochazka J., Husebye E. S. & Abramson J. (2023). Autoimmune amelogenesis imperfecta in patients with APS-1 and coeliac disease.  Nature. 2023 Dec 21 , 624 (7992):653-662.
  9. Bornstein B., Heinemann-Yerushalmi L., Krief S., Adler R., Dassa B., Leshkowitz D., Kim M., Bewick G., Banks R. W. & Zelzer E. (2023). Molecular characterization of the intact mouse muscle spindle using a multi-omics approach.  eLife. 2023 Feb 6 , 12 .
  10. Levi N., Papismadov N., Majewska J., Roitman L., Wigoda N., Eilam R., Tsoory M., Rotkopf R., Ovadya Y., Akiva H., Regev O. & Krizhanovsky V. (2023). p21 facilitates chronic lung inflammation via epithelial and endothelial cells.  Aging (Albany, NY.). 2023, 15 (7):2395-2417.
  11. Abada Manelis A., Beiralas R., Narvaez D., Sperfeld M., Duchin Rapp Y., Lipsman V., Yuda L., Cohen B., Carmieli R., Ben-Dor S., Rocha J., Zhang I. H., Babbin A. R. & Segev E. (2023). Aerobic bacteria produce nitric oxide via denitrification and promote algal population collapse.  ISME Journal. 2023 Aug , 17 (8):1167-1183.
  12. Brivio E., Kos A., Ulivi A. F., Karamihalev S., Ressle A., Stoffel R., Hirsch D., Stelzer G., Schmidt M. V., Lopez J. P. & Chen A. (2023). Sex shapes cell-type-specific transcriptional signatures of stress exposure in the mouse hypothalamus.  Cell Reports. 2023 Aug 29 , 42 (8).
  13. Givony T., Leshkowitz D., Del Castillo D., Nevo S., Kadouri N., Dassa B., Gruper Y., Khalaila R., Ben-Nun O., Gome T., Dobeš J., Ben-Dor S., Kedmi M., Keren-Shaul H., Heffner-Krausz R., Porat Z., Golani O., Addadi Y., Brenner O., Lo D. D., Goldfarb Y. & Abramson J. (2023). Thymic mimetic cells function beyond self-tolerance.  Nature. 2023 Oct 5 , 622 (7981):164172.
  14. Bornstein B., Heinemann-Yerushalmi L., Krief S., Adler R., Dassa B., Leshkowitz D., Kim M., Bewick G., Banks R. W. & Zelzer E. (2023). Molecular characterization of the intact mouse muscle spindle using a multi-omics approach.  eLife. 2023 Feb 6 , 12 .
  15. Michael D., Feldmesser E., Gonen C., Furth N., Maman A., Heyman O., Argoetti A., Tofield A., Baichman-Kass A., Ben-Dov A., Benbenisti D., Hen N., Rotkopf R., Ganci F., Blandino G., Ulitsky I. & Oren M. (2023). miR-4734 conditionally suppresses ER stress-associated proinflammatory responses.  FEBS Letters. 2023 May , 597 (9):1233-1245.
  16. Givony T., Leshkowitz D., Del Castillo D., Nevo S., Kadouri N., Dassa B., Gruper Y., Khalaila R., Ben-Nun O., Gome T., Dobeš J., Ben-Dor S., Kedmi M., Keren-Shaul H., Heffner-Krausz R., Porat Z., Golani O., Addadi Y., Brenner O., Lo D. D., Goldfarb Y. & Abramson J. (2023). Thymic mimetic cells function beyond self-tolerance.  Nature. 2023 Oct 5 , 622 (7981):164172.
  17. Barak-Gavish N., Dassa B., Kuhlisch C., Nussbaum I., Brandis A., Rosenberg G., Avraham R. & Vardi A. (2023). Bacterial lifestyle switch in response to algal metabolites.  eLife. 2023 Jan 24 , 12 .
  18. Zelnik I. D., Mestre B., Weinstein J. J., Dingjan T., Izrailov S., Ben-Dor S., Fleishman S. J. & Futerman A. H. (2023). Computational design and molecular dynamics simulations suggest the mode of substrate binding in ceramide synthases.  Nature Communications. 2023 Dec , 14 (1).
  19. Shemi A., Ben-Dor S., Rotkopf R., Dym O. & Vardi A. (2023). Phylogeny and biogeography of the algal DMS-releasing enzyme in the global ocean.  ISME Communications. 2023 Jul 14 , 3 .
  20. Shemi A., Ben-Dor S., Rotkopf R., Dym O. & Vardi A. (2023). Phylogeny and biogeography of the algal DMS-releasing enzyme in the global ocean.  ISME Communications. 2023 Jul 14 , 3 .